{"id":16058,"date":"2022-07-03T12:02:42","date_gmt":"2022-07-03T05:02:42","guid":{"rendered":"https:\/\/bgrssb.icgbio.ru\/2022\/?p=16058"},"modified":"2022-09-20T10:31:55","modified_gmt":"2022-09-20T03:31:55","slug":"assembly-and-annotation-pipeline-for-microorganism-genomes-from-sequence-to-gene-networks","status":"publish","type":"post","link":"https:\/\/bgrssb.icgbio.ru\/2022\/ru\/2022\/07\/03\/assembly-and-annotation-pipeline-for-microorganism-genomes-from-sequence-to-gene-networks\/","title":{"rendered":"Assembly and annotation pipeline for microorganism genomes from sequence to gene networks"},"content":{"rendered":"<p><em>by Demenkov P.S. | Lashin S.A. | Ivanisenko V.A. | Institute of Cytology and Genetics SB RAS\u00a0<\/em><\/p>\n<p>Microorganisms of natural and technogenic ecosystems represent an inexhaustible pool of<br \/>\nmetabolic pathways for the utilization of some compounds and the biosynthesis of others.<br \/>\nModern experimental technologies of genetics and microbiology provide an effective search<br \/>\nin microbiological collections for new strains of microorganisms promising for<br \/>\nbiotechnological applications, as well as full sequencing of their genomes. As a result of<br \/>\nexperimental studies, large amounts of genetic data are generated. Their analysis requires<br \/>\nthe involvement of modern information and computer technologies, which make it possible,<br \/>\non the basis of genomic information, to reconstruct the gene networks that control the<br \/>\nproduction of target substances.<br \/>\nThis poster proposes a software pipeline for assembly, annotation of sequenced genomes of<br \/>\nmicroorganisms and reconstruction of their gene networks.<\/p>\n<a href=\"https:\/\/bgrssb.icgbio.ru\/2022\/wp-content\/uploads\/sites\/3\/2022\/07\/BGRS2022-Demenkov.pdf\" class=\"pdfemb-viewer\" style=\"\" data-width=\"max\" data-height=\"max\"  data-toolbar=\"bottom\" data-toolbar-fixed=\"off\">BGRS2022-Demenkov<br\/><\/a>\n","protected":false},"excerpt":{"rendered":"<p>by Demenkov P.S. | Lashin S.A. | Ivanisenko V.A. | Institute of Cytology and Genetics SB RAS\u00a0 Microorganisms of natural and technogenic ecosystems represent an inexhaustible pool of metabolic pathways for the utilization of some compounds and the biosynthesis of others. Modern experimental technologies of genetics and microbiology provide an effective search in microbiological collections [&hellip;]<\/p>\n","protected":false},"author":3967,"featured_media":0,"comment_status":"closed","ping_status":"closed","sticky":false,"template":"","format":"standard","meta":[],"categories":[6],"tags":[46,49,220,190,351],"_links":{"self":[{"href":"https:\/\/bgrssb.icgbio.ru\/2022\/ru\/wp-json\/wp\/v2\/posts\/16058"}],"collection":[{"href":"https:\/\/bgrssb.icgbio.ru\/2022\/ru\/wp-json\/wp\/v2\/posts"}],"about":[{"href":"https:\/\/bgrssb.icgbio.ru\/2022\/ru\/wp-json\/wp\/v2\/types\/post"}],"author":[{"embeddable":true,"href":"https:\/\/bgrssb.icgbio.ru\/2022\/ru\/wp-json\/wp\/v2\/users\/3967"}],"replies":[{"embeddable":true,"href":"https:\/\/bgrssb.icgbio.ru\/2022\/ru\/wp-json\/wp\/v2\/comments?post=16058"}],"version-history":[{"count":1,"href":"https:\/\/bgrssb.icgbio.ru\/2022\/ru\/wp-json\/wp\/v2\/posts\/16058\/revisions"}],"predecessor-version":[{"id":16060,"href":"https:\/\/bgrssb.icgbio.ru\/2022\/ru\/wp-json\/wp\/v2\/posts\/16058\/revisions\/16060"}],"wp:attachment":[{"href":"https:\/\/bgrssb.icgbio.ru\/2022\/ru\/wp-json\/wp\/v2\/media?parent=16058"}],"wp:term":[{"taxonomy":"category","embeddable":true,"href":"https:\/\/bgrssb.icgbio.ru\/2022\/ru\/wp-json\/wp\/v2\/categories?post=16058"},{"taxonomy":"post_tag","embeddable":true,"href":"https:\/\/bgrssb.icgbio.ru\/2022\/ru\/wp-json\/wp\/v2\/tags?post=16058"}],"curies":[{"name":"wp","href":"https:\/\/api.w.org\/{rel}","templated":true}]}}