Recognition of flavivirus species on the base of coding genome sequences
Maria Chaley1, Vladimir Kutyrkin2
1Institute of Mathematical Problems of Biology RAS – Branch of KIAM RAS, maramaria@yandex.ru
2Department of Computational Mathematics and Mathematical Physics Moscow State Technical University n.a. N.E. Bauman, vkutyrkin@yandex.ru
Enter the abstract annotation ONLY here
Computational method for recognition the flavivirus species, including their subtypes, is proposed, that based on known sequence of viral genome. The method uses frequency characteristics of amino acid codons in the whole coding sequences of polyproteins. High reliability of this method is supported by correct recognizing of the 15 groups from different species and subtypes of flavivirus genomes.