| [Sym 01] 1. Structural and functional organization of genomes | Breaking the silence: activation of mosquito genome fragments in the human cell nucleus | Glumova Ekaterina | Glumova E.D.1,2, Gridina M.M.1,3, Panchenko D.D.3, Fishman V.S.1,2,3 | 1 Institute of Cytology and Genetics, SB RAS, Novosibirsk, Russia; 2 Novosibirsk National Research State University, Novosibirsk, Russia; 3 Sirius University of Science and Technology |
| [Sym 01] 1. Structural and functional organization of genomes | Identification and functional annotation of genes associated with cellulose biosynthesis in plants of the genus Miscanthus | Starodubtseva Ezhena Sergeevna | Starodubtseva E.1*, Afonnikov D.1,2 | 1 Institute of Cytology and Genetics, SB RAS, Novosibirsk, Russia; 2 Kurchatov Genomic Center of the Institute of Cytology and Genetics, SB RAS, Novosibirsk, Russia |
| [Sym 01] 1. Structural and functional organization of genomes | Development of an analytical pipeline for the assembly and annotation of endophyte bacterial genomes | Lakhova Tatiana Nikolaevna | Lakhova T.1,2,3*, Klimenko A.1, Lashin S.1,2 | 1 Institute of Cytology and Genetics, SB RAS, Novosibirsk, Russia; 2 Kurchatov Genomic Center of the Institute of Cytology and Genetics, SB RAS, Novosibirsk, Russia; 3 Novosibirsk State University, Novosibirsk, Russia |
| [Sym 01] 1. Structural and functional organization of genomes | Bioinformatic analysis of the repeatomes of Aegilops specieswith U and M genomes | Yurkina Anna | Yurkina A.1*, Badaeva E.1,2, González Franco M.1, Sokolova V.1, Divashuk M.1 | 1 All-Russian Research Institute of Agricultural Biotechnology, Russian Academy of Agricultural Sciences, Moscow, Russia; 2 N.I. Vavilov Institute of General Genetics, Russian Academy of Sciences. Moscow, Russia |
| [Sym 01] 1. Structural and functional organization of genomes | Schizophrenia is accompanied by changes in the size of neuronal nuclei and an increase in the frequency of long-range chromatin contacts in aging | Ulianov Kirill | Ulianov K.1*, Molodova M.1, Zagirova D.1,2, Morozov K.1, Morozova P.3, Efimova O.4, Ulianov S.5, Razin S.5, Khaitovich P.4, Khrameeva E.1 | 1 Center for Bio- and Medical Technologies, Skoltech, Moscow, Russia; 2 Institute for Information Transmission Problems (the Kharkevich Institute), Russian Academy of Sciences, Moscow, Russia; 3 Moscow Institute of Psychoanalysis, Moscow, Russia; 4 Vladimir Zelman Center for Neurobiology and Brain Rehabilitation, Skoltech, Moscow, Russia; 5 Institute of Gene Biology, Russian Academy of Sciences, Moscow, Russia |
| [Sym 01] 1. Structural and functional organization of genomes | Complementary interactions LmiRNA with mRNA of human genes | Ivashchenko Anatoliy | Ivashchenko A.1,2*, Pyrkova A.1,2, Niyazova R.1, Orazova S.1 | 1 Al-Farabi Kazakh National University, Almaty, Kazakhstan; 2 Center of Bioinformatics and Nanomedicine, Almaty, Kazakhstan |
| [Sym 01] 1. Structural and functional organization of genomes | Chromosomal insights into Caretta caretta and Trachemysscripta elegans genome assemblies | Proskuryakova Anastasia | Proskuryakova А.1*, Tishakova K.1, Kulak M.2, Ilyina A.2, Iannucci A. 3, Marchenko S.6, Lisacheva L.1, Shagimardanova E.5,6, Trifonov V. 1, Romanenko S.1 | 1 Institute of Molecular and Cellular Biology, SB RAS, Novosibirsk, Russia; 2 St. Petersburg State University, St. Petersburg, Russia; 3 University of Florence, Florence, Italy; 4 Novosibirsk State University, Novosibirsk, Russia; 5 Kazan (Volga Region) Federal University Kazan, Russia; 6 Skolkovo Institute of Science and Technology (Skoltech) Moscow, Russia |
| [Sym 01] 1. Structural and functional organization of genomes | Diversity, evolution and chromosomal localization of conserved satDNAs in viperid genomes (Viperidae, Reptilia) | Lisachova Lada | Lisachova L.S.1*, Lisachov A.P.2,3, Spangenberg V.E.4,5, Srikulnath K.3, Romanenko S.A.1 | 1 Institute of Molecular and Cellular Biology, SB RAS, Novosibirsk, Russia; 2 Institute of Cytology and Genetics, SB RAS, Novosibirsk, Russia; 3 Kasetsart University, Bangkok, Thailand4 Vavilov Institute of General Genetics RAS, Moscow, Russia; 5 Scientific Center of Zoology and Hydroecology, NAS RA, Yerevan, Armenia |
| [Sym 01] 1. Structural and functional organization of genomes | Prediction of Yersinia pestis source of isolation and intraspecific classification based on gradient boosting models | Kovrizhnikov Alexander Viktorovich | Kovrizhnikov A.1*, Karapetyan L.1, Nikiforov K.1, Eroshenko G1. | 1 Russian Anti-Plague Research Institute “Microbe”, Saratov, Russia |
| [Sym 01] 1. Structural and functional organization of genomes | Genome-resolved global population structure of the causative agent of pseudotuberculosis | Shevchenko Konstantin Sergeevich | Shevchenko K.S. 1*, Sidorin A.S. 1, Eroshenko G.A. 1 | 1 Russian Research Anti-Plague Institute “Microbe”, Saratov, Russia |
| [Sym 01] 1. Structural and functional organization of genomes | Classification of rare mitochondrial genes from various groups of eukaryotes and their comparison with human nuclear genes | Ivanov Mikhail | Ivanov M.M.1*, Dibrova D.V.1,2 | 1 Faculty of Bioengineering and Bioinformatics, Lomonosov Moscow State University, Moscow, Russia; 2 A. N. Belozersky Research Institute of Physico-Chemical Biology, Lomonosov Moscow State University, |
| [Sym 01] 1. Structural and functional organization of genomes | Benchmark of the Oxford Nanopore, EM-seq, and HumanMethylationEPIC BeadChip for detection of the 5mC sites in cancer and normal samples | Deinichenko Kseniia | K.A. Deinichenko1*, P.A. Grebnev1, A.M. Shaymardanov1, A.A. Ivashechkin1, K.S. Grammatikati1, D.V. Svetlichnyy1 | ¹ Center for Strategic Planning and Management of Biomedical Health Risks, Federal Medical and Biological Agency. Pogodinskaya St. 10, bldg. 1, Moscow, 119121, Russia |
| [Sym 01] 1. Structural and functional organization of genomes | Composition and diversity of antibiotic resistance genes in the gut microbiota of tuberculosis patients | Zaitseva Iuliia Albertovna | Zaitseva I.1,5*, Yunusbaeva M.1, Sabirova D.1, Danilov L. 2, Yunusbayeva A.1,3, Glotov O.5, Altinbaev R.4, Yunusbayev B.1,2 | 1 Saint Petersburg State Phtisiopulmonology Research Institute, Saint Petersburg, Russia; 2 Saint Petersburg State University, Saint Petersburg, Russia; 3 State University of Aerospace Instrumentation, Saint Petersburg, Russia; 4 Institute of Higher Nervous Activity and Neurophysiology, Russian Academy of Sciences, Moscow, Russia 5Federal State Budgetary Institution «Federal Scientific and Clinical Center for Infectious Diseases of the Federal Medical and Biological Agency», Saint Petersburg, Russia |
| [Sym 01] 1. Structural and functional organization of genomes | Comparative characteristics of DNA structure features of tata and TATA-less promoters of H.sapiens and A.thaliana | Savina Ekaterina Alexsandrovna | Savina E.1,2 *, Soldatenkova O.2, Anashkina A. 1,2, Il’icheva I.1 | 1 Sechenov First Moscow State Medical University of the Russian Ministry of Health (Sechenov University), Moscow, Russia; 2 V.A. Engelhardt Institute of Molecular Biology, RAS, Moscow, Russia |
| [Sym 01] 1. Structural and functional organization of genomes | Analysis of Bacteriophage and Their Bacterial Host Diversity in Gut Metagenomes of Healthy Individuals and Patients with HIV-2 Infection | Erochkina Sofia Sergeevna | Erochkina S.1*, Suchko P., Dudurich V., Glotov O., Danilov L.1 | 1 Sirius University of Science and Technology, federal territory "Sirius", Russia; 2 Saint Petersburg State University, Saint-Petersburg, Russia; 3 Cerbalab LLC; 4 Federal State Budgetary Institution «Federal Scientific and Clinical Center for Infectious Diseases of the Federal Medical and Biological Agency», Saint-Petersburg, Russia |
| [Sym 01] 1. Structural and functional organization of genomes | Identification of Viral Taxa Associated with Cancer Patients | Zhirnova Anna | Zhirnova A.1*, Suchko P.2, Dudurich В.3, Glotov O.4, Danilov L.1,2 | 1 Sirius University of Science and Technology, federal territory "Sirius", Russia; 2 Saint Petersburg State University, Saint-Petersburg, Russia; 3 Cerbalab LLC; 4 Federal State Budgetary Institution «Federal Scientific and Clinical Center for Infectious Diseases of the Federal Medical and Biological Agency», Saint-Petersburg, Russia |
| [Sym 01] 1. Structural and functional organization of genomes | Phage-mediated mechanism of genomic stability in healthy Lactobacillus iners lineages | Denisov Pavel | Pavel Denisov * 1, Natalya Mikhanoshina 1, Marina Krotova 1, Vera Muravieva 1, Roman Izyumov 1, Tatiana Priputnevich1,2,3 | 1 National Medical Research Center for Obstetrics, Gynecology and Perinatology named after Academician V.I.Kulakov of Ministry of Healthcare of Russian Federation, Moscow, Russia; 2 Federal State Autonomous Educational Institution of Higher Education «N.I. Pirogov Russian National Research Medical University» of the Ministry of Health of the Russian Federation (FSАEI HE N.I. Pirogov RNRMU MOH Russia), Moscow, Russia; 3 Federal State Budgetary Educational Institution of Further Professional Education "Russian Medical Academy of Continuous Professional Education" of the Ministry of Healthcare of the Russian Federation, Department of Medical Microbiology named after Academician Z.V. Ermolyeva, 125993, Moscow, Russia |
| [Sym 01] 1. Structural and functional organization of genomes | Phylogenomic analysis of membrane subunits of Na+-dependent decarboxylases | Samorukova Tatiana Dmitrievna | Samorukova T.D.1*, Mulkidjanian A.Y.1,2, Dibrova D.V.1,2 | 1 School of Bioengineering and Bioinformatics, Lomonosov Moscow State University, Moscow, Russia; 2 Belozersky Institute of Physico-Chemical Biology, Moscow, Russia |
| [Sym 01] 1. Structural and functional organization of genomes | A method for predicting enhancer RNA loci from CAGE data | Pintus Sergey | Prasolov D.E.1, Pintus S.S.1* | 1 Sirius University of Science and Technology, Sirius, Russia |
| [Sym 01] 1. Structural and functional organization of genomes | Non-canonical function of the piRNA pathway components Vasa and Rhino in the maintenance of germline stem cells in Drosophila melanogaster | Kombarov Ilia | Kombarov I.A.1*, Kotov A.A.1, Olenina L.V.1 | 1 Koltzov Institute of Developmental Biology of the Russian Academy of Sciences, IDB RAS, Moscow, Russia |
| [Sym 01] 1. Structural and functional organization of genomes | Computer analysis of genomes complexity and entropy in viruses and bacteria | Orlov Yuriy L | Bukreeva A.V. 1, Safrygina A.A. 1, Syrovatskaya Y.V. 1, Savina E.A. 1, Dergilev A.I. 1, Orlov Y.L. 1,2* | 1 I.M.Sechenov First Moscow State Medical University (Sechenov University), Moscow, Russia; 2 Novosibirsk State University, Novosibirsk, Russia |
| [Sym 01] 2. Regulatory genomics | DNA Motifs Modulating the Transcriptional Response of Genes to Cytokinin in a Condition-Dependent Manner in Arabidopsis thaliana L. | Ryabov Yurii Aleksandrovich | Ryabov Yu.A.¹*, Dolgikh V.A.¹, Zemlyanskaya E.V.¹ | ¹ Institute of Cytology and Genetics, Siberian Branch of the Russian Academy of Sciences, Novosibirsk, Russia |
| [Sym 01] 2. Regulatory genomics | ARGO_rSNP_HOCOMOCO, a web-based system for analyzing the impact of SNPs on transcription factor binding sites | Vishnevsky Oleg Vladimirovich | Vishnevsky O.1,2*, Ponomarenko M.1 | 1 Institute of Cytology and Genetics, SB RAS, Novosibirsk, Russia; 2 Novosibirsk State University, Novosibirsk, Russia |
| [Sym 01] 2. Regulatory genomics | MiceDEGdb 1.1 Knowledge Base of Differentially Expressed Mouse Genes as a Model Organism for Biomedical Research | Podkolodnaya Olga | Podkolodnaya O.A., Chadaeva I.V., Filonov S.V., Podkolodny N.L., Rasskazov D.A., Tverdokhleb N.N., Zolotareva K.A., Bogomolov A.G., Kondratyuk E.Yu., Oshchepkov D.Yu., Ponomarenko M.P. | Institute of Cytology and Genetics SB RAS, Novosibirsk, Russia; Novosibirsk State University, Novosibirsk, Russia. |
| [Sym 01] 2. Regulatory genomics | Maternal mRNA of early embryo developmental genes in chicken diplotene oocytes revealed by transcriptome analysis and RNA-FISH on lampbrush chromosomes | Krasikova Alla | Kulikova T.1, Fedorov A.1, Krasikova A.1* | 1 Laboratory of Cell Nucleus Structure and Dynamics, Saint-Petersburg State University, Saint-Petersburg, Russia |
| [Sym 01] 2. Regulatory genomics | Identification of functional genetic variants involved in Type 1 Diabetes development using eQTL analysis | Kokorichev Kirll Andreevich | K.A. Kokorichev1*, D.I. Tychinin 1, A.V. Korobeinikova¹, A.A. Rybina1, D.V. Svetlichniy1 | ¹Center for Strategic Planning and Management of Biomedical Health Risks, Federal Medical and Biological Agency. Pogodinskaya St. 10, bldg. 1, Moscow, 119121, Russia |
| [Sym 01] 2. Regulatory genomics | Handling multi-mapped reads in RNA-DNA interaction data | Zvezdin Dmitry Sergeevich | Zvezdin D.1,2*, Zharikova A.1,2,3, Mironov A.1,2 | 1 Faculty of Bioengineering and Bioinformatics, Lomonosov Moscow State University, Moscow, Russia; 2 Vavilov Institute of General Genetics, Russian Academy of Sciences, Moscow, Russia; 3 National Medical Research Center for Therapy and Preventive Medicine, Ministry of Healthcare of the Russian Federation; 101000 Moscow, Russia |
| [Sym 01] 2. Regulatory genomics | The Role of Regulatory Intergenic Variants in the Pathogenesis of Type 1 Diabetes | Korobeinikova Anna | A.V. Korobeinikova¹*, D.V. Svetlichny¹ | ¹Center for Strategic Planning and Management of Biomedical Health Risks, Federal Medical and Biological Agency.Pogodinskaya St. 10, bldg. 1, Moscow, 119121, Russia |
| [Sym 01] 2. Regulatory genomics | Relationship between the epigenetic landscape and alternative splicing in a SIRT6 knockout model | Malygina Alexsandra | Malygina A.1*, Okeowo T.1,2, Smirnov D.1, Toiber D.2, Khrameeva E.1 | 1 Skolkovo Institute of Science and Technology, Moscow, Russia; 2 Ben-Gurion University of the Negev, Beer Sheva, Israel |
| [Sym 01] 2. Regulatory genomics | Palindromic sites in highly conserved genomic elements which loss is associated with the expression of orthologous genes | Khaziev Georgii Andreevich | Khaziev G.1, *, Aglamazova A.1, Seliverstov A.1, Zverkov O.1, Rubanov L.1, Shilovsky G.1, Lyubetsky V.1 | 1 Institute for Information Transmission Problems of the Russian Academy of Sciences (Kharkevich Institute), Moscow, Russia |
| [Sym 01] 2. Regulatory genomics | DNA methylation profiling in promoter regions of CD3+ T-lymphocytes in mice following mRNA-vaccine immunization | Nugumanova Alina | Nugumanova A.1*, Kunyk D.1, Kolmykov S.1, Mitina M.1, Lind K.2, Shumeev A.1, Reshetnikov V.1 | 1 Sirius University of Science and Technology, Sirius, Russia; 2 Institute of Physics and Technology, Ural Federal University, Yekaterinburg, Russia |
| [Sym 01] 2. Regulatory genomics | Analysis of the Functional Role of Super-Enhancers in Brain Neuronal Development | Smirnov Dmitrii Nikolaevich | Smirnov D.1*, Ashniev G.1,2, Makus Y.1,2, Orlov A.1,2, | 1 Central University, Moscow 123056, Russia; 1 Prokhorov General Physics Institute of the Russian Academy of Sciences, Moscow 119991, Russia |
| [Sym 01] 2. Regulatory genomics | Analysis of the spatial organization and transcriptional activity of superenhancers in breast cancer cells | Okatova Anna | Okatova A.S.1*, Ashniev G.A.1 | 1 National Research University «Higher School of Economics», Moscow, Russia |
| [Sym 01] 2. Regulatory genomics | Prediction of promoter activity regions in Mycoplasmoides gallisepticum using machine learning and agent-based modeling | Semenova Elizaveta | Semenova E.*, Fisunov G. | Research Institute for Systems Biology and Medicine, Moscow, Russia |
| [Sym 01] 4. Genome-wide transcriptomics (differential gene expression) | Identification of potential single nucleotide polymorphism (SNP) markers of significant changes in the affinity of TATA-binding protein to promoters of human genes associated with primary open-angle glaucoma (POAG) | Ponomarenko Mikhail P. | Dotsenko P.1,2, Zolotareva K.1, Podkolodnyy N.1,2,3, Ivanov R.1, Makarova A.-L.1,2,Chadaeva I.1, Bogomolov A.1,2, Demenkov P.1, Ivanisenko V.1, Oshchepkov D.1,4,Ponomarenko M.1, * | 1 Institute of Cytology and Genetics, SB RAS, Novosibirsk, Russia; 2 Novosibirsk State University, Novosibirsk, Russia; 3 Institute of Computational Mathematics and Mathematical Geophysics, SB RAS, Novosibirsk, Russia; 4 Kurchatov Genomic Center of the Institute of Cytology and Genetics, SB RAS, Novosibirsk, Russia |
| [Sym 01] 4. Genome-wide transcriptomics (differential gene expression) | FlySNP_TATAdb: a knowledge base of SNP markers of Drosophila melanogaster gene promoters as a model animal for biomedicine that alter the affinity of TATA-binding protein (TBP) to these promoters and the expression of these genes | Ponomarenko Mikhail P. | Deryuzhenko M.1, Zolotareva K.1, Rasskazov D.1, Podkolodnyy N.1,2, Tverdokhleb N.1, Sharypova E.1, Ponomarenko P.1, Chadaeva I.1, Bogomolov A.1, Kondratyuk E.1,3, Savinkova L.1, Podkolodnaya O.1, Gruntenko N.1, Kolchanov N.1,4, Ponomarenko M.1, * | 1 Institute of Cytology and Genetics, SB RAS, Novosibirsk, Russia; 2 Institute of Computational Mathematics and Mathematical Geophysics, SB RAS, Novosibirsk, Russia; 3 Siberian Federal Scientific Centre of Agro-BioTechnologies, RAS, Krasnoobsk, Novosibirsk area, Russia; 4 Novosibirsk State University, Novosibirsk, Russia |
| [Sym 01] 4. Genome-wide transcriptomics (differential gene expression) | Identification and analysis of long non-coding RNA sequence diversity in the pan-transcriptome | Pronozin Artem Yurevich | Pronozin A.1,2*, Afonnikov D.1,2 | 1 Institute of Cytology and Genetics, SB RAS, Novosibirsk, Russia; 2 Kurchatov Genomic Center of the Institute of Cytology and Genetics, SB RAS, Novosibirsk, Russia |
| [Sym 01] 4. Genome-wide transcriptomics (differential gene expression) | The Impact of Short-Term Restraint-Induced Stress on the Transcriptomic Profiles of the Hypothalamus in Hypertensive ISIAH and Normotensive WAG Rats | Oshchepkov Dmitry | Oshchepkov D.Y.1,2,*, Makovka Y.V.1,3, Fedoseeva L.A.1, Seryapina A.A.1, Markel A.L.1,3, Redina O.E.1 | 1 Institute of Cytology and Genetics, SB RAS, Novosibirsk, Russia; 2 Kurchatov Genomic Center of the Institute of Cytology and Genetics, SB RAS, Novosibirsk, Russia; 3 Department of Natural Sciences, Novosibirsk State University, Novosibirsk, Russia |
| [Sym 01] 4. Genome-wide transcriptomics (differential gene expression) | FlyDEGdb: a knowledge base of differentially expressed genes in Drosophila melanogaster as a model animal for biomedicine | Ponomarenko Mikhail P. | Rasskazov D.1, Deryuzhenko M.1, Zolotareva K.1, Tverdokhleb N.1, Makovka Yu.1, Suslov V.1, Podkolodnyy N.1,2, Bogomolov A.1, Podkolodnaya O.1, Kondratyuk E.1,3, Chadaeva I.1 Fedoseeva L.1, Seryapina A.1, Oshchepkov D.1, Markel A.1,4, Redina O.1, Gruntenko N.1, Kolchanov N.1,4, Ponomarenko M.1, * | 1 Institute of Cytology and Genetics, SB RAS, Novosibirsk, Russia; 2 Institute of Computational Mathematics and Mathematical Geophysics, SB RAS, Novosibirsk, Russia; 3 Siberian Federal Scientific Centre of Agro-BioTechnologies, RAS, Krasnoobsk, Novosibirsk area, Russia; 4 Novosibirsk State University, Novosibirsk, Russia |
| [Sym 01] 4. Genome-wide transcriptomics (differential gene expression) | Characterization of the gene expression profile in brain and ovarian tissues of parthenogenetic lizards of the genus Darevskia and their parental species. | Chistyakov Aleksandr Sergeevich | Chistyakov A.1*, Korchagin V.1, Arakelyan M.2, Chrustaleva A.1, Martyrosyan I.1, Ryskov A.1 | 1 Institute of Gene Biology, RAS, Moscow, Russia; 2 Yerevan State University, Yerevan, Armenia |
| [Sym 01] 4. Genome-wide transcriptomics (differential gene expression) | Proteome-Level Mechanisms of the Intracellular Response to Oxidative Stress in Candida glabrata with Deletion of the RPN4 Transcription Factor | Bogdanova Alina Stanislavovna | Kulagin K.A.1, Bogdanova A.S.1,2,3*, Gladys N.S.1,2, Kazakova E.M.2 | 1 Engelhardt Institute of Molecular Biology, Russian Academy of Sciences, Moscow, Russia; 2 Talrose Institute for Energy Problems of Chemical Physics, Federal Research Center of Chemical Physics, Russian Academy of Sciences, Moscow, Russia; 3 HSE University, Moscow, Russia |
| [Sym 01] 4. Genome-wide transcriptomics (differential gene expression) | Modeling Single-Cell RNA Expression Responses to Small-Molecule Perturbations with scDiffVAE | Markelova Ekaterina Evgenievna | Markelova E.E.1,2*, Karitskaia P.E.3, Antonets D.V.1, Zhukov L.A.1, Shtokalo D.N.1, Vyatkin Y.V.1, Ramensky V.E.1,4,5 | 1 MSU Institute for Artificial Intelligence, Lomonosov Moscow State University, Moscow, Russia; 2 Federal Research Centre «Fundamentals of Biotechnology» of the Russian Academy of Sciences, Moscow, Russia; 3 Novosibirsk State University, Novosibirsk, Russia; 4 National Medical Research Center for Therapy and Preventive Medicine of the Ministry of Healthcare of Russian Federation, Moscow, Russia; 5 Department of Bioengineering and Bioinformatics, Lomonosov Moscow State University, Moscow, Russia |
| [Sym 01] 4. Genome-wide transcriptomics (differential gene expression) | Exploring efficiency of bulk RNA-sequencing differential expression signatures | Vitalik Bezuglov | Bezuglov V.1,2,3*, Akhtyamov P.3, Favorov A.3,4, Kasianov, A.3, Stupnikov A.3 | 1 Belozersky Institute of Physico-Chemical Biology, Lomonosov Moscow State University, Moscow, Russia; 2 Faculty of Bioengineering and Bioinformatics, Lomonosov Moscow State University, Moscow, Russia; 3 Vavilov Institute of General Genetics, Moscow, Russia; 4 Johns Hopkins University School of Medicine, Baltimore, Maryland, USA |
| [Sym 01] 4. Genome-wide transcriptomics (differential gene expression) | Analysis of Gene Expression from Alternative LINE-1 Promoters in the Human Placenta | Lushnikov Ivan | Lushnikov I.V.1*, Zhilkina M.A.1,2, Tolmacheva E.N.3, Vasiliev S.A. 1 | 1 Research Institute of Medical Genetics, Tomsk National Research Medical Center, Tomsk, Russia |
| [Sym 01] 4. Genome-wide transcriptomics (differential gene expression) | Transcriptomic alterations induced by perlatolic acid are accompanied by modulation of SASP genes in human fibroblasts | Kudasheva Evelina | Kudasheva E.R.1,2*, Shmarin V.V.1, Guvatova Z.G.1,2 | 1 Russian Scientific Center of Surgery named after B.V. Petrovsky, Moscow, Russia; 2 Engelhardt Institute of Molecular Biology, Russian Academy of Sciences, Moscow, Russia |
| [Sym 01] 4. Genome-wide transcriptomics (differential gene expression) | Comparative transcriptomic analysis of cambial tissues of Karelian birch and silver birch | Safronycheva Elizaveta | Safronycheva E.¹²*, Potokina E.¹², Zhigunov A.¹, Vetchinnikova L.³ | ¹ Saint Petersburg State Forest Technical University named after S.M. Kirov, Saint Petersburg, Russia² Saint Petersburg Forestry Research Institute, Saint Petersburg, Russia³ Forest Research Institute of the Karelian Research Centre of the Russian Academy of Sciences, Petrozavodsk, Russia |
| [Sym 01] 4. Genome-wide transcriptomics (differential gene expression) | Impact of Cold Stress on Immune Response in Chickens: Analysis of Transcriptomic Changes and Regulatory Enhancers | Grushina Valentina | Grushina V.1*, Pintus S.1 | 1 Sirius University of Science and Technology, Sirius Russia |
| [Sym 01] 4. Genome-wide transcriptomics (differential gene expression) | Computational reconstruction and network analysis of isoform-specific gene networks in glioblastoma | Bratchikova Maiia | Bratchikova M.S.¹, Orlov Y.L.¹˒²˒³, Anashkina A.A4 | ¹ I.M. Sechenov First Moscow State Medical University (Sechenov University), Moscow, Russia² Patrice Lumumba Peoples’ Friendship University of Russia (RUDN University), Moscow, Russia³ Novosibirsk State University, Novosibirsk, Russia; 4 Engelhardt Institute of Molecular Biology, Russian Academy of Sciences (RAS) |
| [Sym 02] 1. Reconstruction, computational analysis and modeling of gene networks and metabolic pathways | Reconstruction of the associative gene network of the renin-angiotensin-aldosterone system under pharmacological correction of its dysfunction | Chadaeva Irina | I. Chadaeva*, K. Kuzminykh, N. Levanova, P. Ponomarenko, P. Demenkov, E. Kondratyuk, V. Suslov, M. Ponomarenko | Institute of Cytology and Genetics, Novosibirsk 630090, Russia |
| [Sym 02] 1. Reconstruction, computational analysis and modeling of gene networks and metabolic pathways | Phylogenetic characteristics of the gene network associated with the renin-angiotensin-aldosterone system | Chadaeva Irina | I. Chadaeva*, V. Suslov, K. Kuzminykh, R. Ivanov, E. Kondratyuk, M. Ponomarenko | Institute of Cytology and Genetics, Novosibirsk 630090, Russia |
| [Sym 02] 1. Reconstruction, computational analysis and modeling of gene networks and metabolic pathways | Transcription Factors within the Human RAAS Associative Gene Network | Chadaeva Irina | Chadaeva I.*, Vishnevsky O., Kuzminykh K., Yatsyk I., Kondratyuk E. | Institute of Cytology and Genetics, Novosibirsk 630090, Russia |
| [Sym 02] 1. Reconstruction, computational analysis and modeling of gene networks and metabolic pathways | Hedgehog signaling in humans: description in the “HumHHpathdb” knowledge base | Bukharina Tatyana | Bukharina T.1,2*, Furman D. 1,2** | 1 Institute of Cytology and Genetics, SB RAS, Novosibirsk, Russia; 2 Novosibirsk State University, Novosibirsk, Russia |
| [Sym 02] 1. Reconstruction, computational analysis and modeling of gene networks and metabolic pathways | Knowledge base on the gene network regulating cholesterol biosynthesis in human cells and using its data in bioinformatics research | Mikhailova Angelina Dmitrievna | Mikhailova A.D. 1 Ignatieva E.V. 2*, | 1 Novosibirsk State University, Novosibirsk, Russia; 2 Institute of Cytology and Genetics, SB RAS, Novosibirsk, Russia |
| [Sym 02] 1. Reconstruction, computational analysis and modeling of gene networks and metabolic pathways | The gene network and knowledge base on human thermoregulation | Ignatieva Elena V. | Ignatieva E.V. 1*, Demenkov P.S. 1, Bogomolov A.G. 1, Ivanov R.A. 1, Lashin S.A. 1,2, Mikhailova A.D. 2, Yudin N.S. 1 | 1 Institute of Cytology and Genetics, SB RAS, Novosibirsk, Russia; 2 Novosibirsk State University, Novosibirsk, Russia |
| [Sym 02] 1. Reconstruction, computational analysis and modeling of gene networks and metabolic pathways | Identification of regulatory proteins that influence differences in gene expression between the M2a, M2b, M2c, and M2d macrophage phenotypes | Antropova Evgeniia | Antropova E.A.*, Yatsyk I.V., Demenkov P.S., Ivanisenko T.V., Ivanisenko V.A. | 1 Institute of Cytology and Genetics, SB RAS, Novosibirsk, Russia |
| [Sym 02] 1. Reconstruction, computational analysis and modeling of gene networks and metabolic pathways | Gene network regulating hepatocyte apoptosis in hepatocellular carcinoma: reconstruction and analysis based on scRNA-seq data and the ANDSystem knowledge base | Adamovskaya Anna Valentinovna | Adamovskaya A.V. 1,2*, Yatsyk I.V.1,2, Kleshchev M.A. 1,2, Demenkov P.S. 1,2, Ivanisenko T.V. 1,2, Ivanisenko V.A. 1,2 | 1 Institute of Cytology and Genetics, SB RAS, Novosibirsk, Russia; 2 Novosibirsk State University, Novosibirsk, Russia |
| [Sym 02] 1. Reconstruction, computational analysis and modeling of gene networks and metabolic pathways | Autonomous Computational Module as Part of a Platform for Modeling Molecular-Genetic Systems | Kazantsev Fedor | Kazantsev F.V.1,2,*, Mukhin A.M.1,2, Dolmatova A.A.1,2, Lashin S.A.1,2 | 1 Institute of Cytology and Genetics SB RAS, Novosibirsk, Russia; 2 Novosibirsk State University, Novosibirsk, Russia |
| [Sym 02] 1. Reconstruction, computational analysis and modeling of gene networks and metabolic pathways | Single-Cell RNA-Seq Profiling of Transposable Element Expression in Human Peripheral Blood Cells During Viral Infections | Fateev Oleg Dmitrievich | Oleg D. Fateev1, Vasily E. Akimov1, Olga V. Glushkova1, Aleksandr V. Bolbat1, Azat V. Abdullatypov1, Olga A. Antonova1, Vladimir V. Shiryagin1, Nikolai A. Bugaev-Makarovsky1, Vladimir S. Yudin1, Anton A. Keskinov1, Sergei M. Yudin1, Dmitriy V. Svetlichny1, and Veronika I. Skvortsova2 | 1 Federal State Budgetary Institution “Center for Strategic Planning and Management of Biomedical Health Risks” of the Federal Medical-Biological Agency (FSBI “CSP” of FMBA of Russia), Pogodinskaya str. 10, bld. 1, Moscow 119435, Russia; 2 Federal Medical-Biological Agency (FMBA of Russia), Volokolamskoye Shosse, 30, Moscow 119121, Russia |
| [Sym 02] 1. Reconstruction, computational analysis and modeling of gene networks and metabolic pathways | System-level analysis of lncRNA-associated regulatory programs in severe COVID-19 using co-expression modules and network analysis | Mandybura Vitalii | V. Mandybura¹*, A. Gribkova¹, E. Trifonova², A. Gusarova², A. Babovskaya², V.Stepanov² | ¹ Lomonosov Moscow State University, Faculty of Biology, Department of Bioengineering, Moscow, Russia² Tomsk National Research Medical Center, Tomsk, Russia |
| [Sym 02] 1. Reconstruction, computational analysis and modeling of gene networks and metabolic pathways | Development of the Plant_hormones knowledge base and the PlantGnD software pipeline for automated text mining and reconstruction of plant growth regulator gene networks | Yatsyk Ivan | I.V. Yatsyk1*, E.V. Zemlyanskaya1, V.A. Ivanisenko1,2,3 | 1 Institute of Cytology and Genetics, SB RAS, Novosibirsk, Russia; 2 Novosibirsk State University, Novosibirsk, Russia; 3 Kurchatov Genomic Center of the Institute of Cytology and Genetics, SB RAS, Novosibirsk, Russia |
| [Sym 02] 1. Reconstruction, computational analysis and modeling of gene networks and metabolic pathways | Constraint-based community modeling of methane-driven perchlorate bioremediation | Esembaeva Maryam | Esembaeva M.A.1*, Kachnov V.A.1, Melikhova E.V.1, Kulyashov M.A.1 | 1 Department of Computational Biology, Scientific Center for Genetics and Life Sciences, Sirius University of Science and Technology, Sirius, Russia |
| [Sym 02] 1. Reconstruction, computational analysis and modeling of gene networks and metabolic pathways | Insulin resistance in FOXO1 signalling underlies reduced POMC gene expression in broiler chickens | Volyanskaya Anastasiia | Volyanskaya A.1*, Gusev O.2, Kolpakov F.3, Akberdin I.3,4 | 1 Institute of Cytology and Genetics SB RAS, Novosibirsk, Russia; 2 Institute of Biochemistry and Genetics, UFRC RAS, Ufa, Russia; 3 Sirius University of Science and Technology, Sirius, Russia; 4 Novosibirsk State University, Novosibirsk, Russia |
| [Sym 02] 1. Reconstruction, computational analysis and modeling of gene networks and metabolic pathways | Gene networks of disease-specific pathways underlying changes in the amino acid and acylcarnitine profile in blood plasma in Parkinson's disease and vascular parkinsonism | Makarova Aelita-Luiza | A.A. Makarova1,2*, P.M. Melnikova2, A.D. Rogachev2,3, P.S. Demenkov1,2,4, T.V.Ivanisenko1,2,4, E.V. Predtechenskaya2, S. Karmanov1,2, V.V. Koval5, A.G. Pokrovsky2, I.N. Lavrik1,6, N.A. Kolchanov1,2, V.A. Ivanisenko1,2,4 | 1 Institute of Cytology and Genetics, SB RAS, Novosibirsk, Russia; 2 Novosibirsk State University, Novosibirsk, Russia; 3 N. N. Vorozhtsov Novosibirsk Institute of Organic Chemistry, SB RAS, Novosibirsk, Russia; 4 Kurchatov Genomic Center of the Institute of Cytology and Genetics, SB RAS, Novosibirsk, Russia; 5 Institute of Chemical Biology and Fundamental Medicine, SB RAS, Novosibirsk, Russia; 6 Translational Inflammation Research, Medical Faculty, Center of Dynamic Systems, Otto von Guericke University, Magdeburg, Germany |
| [Sym 02] 1. Reconstruction, computational analysis and modeling of gene networks and metabolic pathways | Community modeling using dynamic FBA of metabolic interactions between Methylococcus capsulatus and Dechloromonas agitata | Melikhova Ekaterina Viktorovna | Melikhova E.V.1*, Esembaeva M.A.1, Kachnov V.A.1, Kulyashov M.A.1 | 1 Department of Computational Biology, Scientific Center for Genetics and Life Sciences, Sirius University of Science and Technology, Sirius, Russia |
| [Sym 02] 1. Reconstruction, computational analysis and modeling of gene networks and metabolic pathways | Reconstruction of gene networks of collagen functioning and metabolism | Alexeeva Aleksandra | Alekseeva A.E. 1*, Yatsyk I.V. 1,2, Ivanisenko V.A. 2,3, Kolchanov N.A. 1,2,3, Letyagin A.Yu. 4 | 1 Novosibirsk State University, Novosibirsk, Russia; 2 Institute of Cytology and Genetics, SB RAS, Novosibirsk, Russia; 3 Kurchatov Genomic Center of the Institute of Cytology and Genetics, SB RAS, Novosibirsk, Russia; 4 Research Institute of Clinical and Experimental Lymphology - Branch of ICG SB RAS, Novosibirsk, Russia |
| [Sym 02] 1. Reconstruction, computational analysis and modeling of gene networks and metabolic pathways | Bistability of periodic solutions of 3D model of circular gene network with step feedbacks | Glubokikh Alina Vitalevna | Glubokikh A.1 | 1 Novosibirsk National Research State University, Novosibirsk, Russia |
| [Sym 02] 2. Mathematical immunology and epidemiology | Comparative in silico analysis of neoantigen cancer mRNA vaccine constructs | Kirilenko Kirill Mikhailovich | Kirilenko K.1,2*, Antonets D.2, Ibragimova A.3, Fedorov A.3, Tretyakova M.3, Patysheva M.3, Denisov E.3 | 1 Center for Systems Bioinformatics, Tomsk National Research Medical Center, Russian Academy of Sciences, Tomsk, Russia2Institute of Artificial Intelligence, Moscow State University, Moscow, Russia3Cancer Research Institute, Tomsk National Research Medical Center, Russian Academy of Sciences, Tomsk, Russia |
| [Sym 02] 2. Mathematical immunology and epidemiology | Multiscale Model of Infection Spread Driven by Immune Response | Kotov Sergei | Kotov S. V1*, Krivorotko O. I1 | 1 Sirius University of Science and Technology, Sirius Federal Territory, Russia |
| [Sym 03] 1. Structural biology of proteins, nucleic acids and membranes | Structural changes in red blood cell membranes during their interaction with pregnenolone and progesterone | Mokrushnikov Pavel Valentinovich | Mokrushnikov P.V.1,2* | 1 Novosibirsk State University of Architecture and Civil Engineering, Novosibirsk, Russia; 2 Federal Research Center for Fundamental and Translational Medicine of the Siberian Branch of the Russian Academy of Sciences, Novosibirsk, Russia |
| [Sym 03] 1. Structural biology of proteins, nucleic acids and membranes | Modeling the effects of 4-hexylresorcinol on bacterial POPE/POPG membranes | Tereshkina Ksenia B. | Tereshkin E.V.1*, Loiko N.G.2, Kovalenko V.V.1, Krupyanskii Y.F.1, Tereshkina K.B.1 | 1 Semenov Federal Research Center for Chemical Physics, Russian Academy of Sciences, Moscow, Russia; 2 Federal Research Center “Fundamentals of Biotechnology”, Russian Academy of Sciences, Moscow, Russia |
| [Sym 03] 1. Structural biology of proteins, nucleic acids and membranes | A platform for mapping the diffraction parameters of biopolymer samples using a microbeam of synchrotron radiation. | Tatiana Nikolaeva Andreevna | Nikolaeva T.*, Ukladov E., Arkhipov S., Komarov V. | CPC "Siberian Ring Source of Photons, Novosibirsk, Russia |
| [Sym 03] 1. Structural biology of proteins, nucleic acids and membranes | Application of the principal component analysis (PCA) to search for thermostable DNA polymerases of the A family | Ding Xinxin | Ding X.1*, Efimov V.2 | 1 Novosibirsk State University, Novosibirsk, Russia; 2 Institute of Cytology and Genetics of the Siberian Branch of the Russian Academy of Sciences, Novosibirsk, Russia |
| [Sym 03] 1. Structural biology of proteins, nucleic acids and membranes | Molecular Dynamics Study of Schizophrenia-Associated Mutations in the Gene Encoding the GABA Transporter GAT-1 | Abdurazakov Amal | Abdurazakov A.1*, Abashkin D.1, Semina E. 1, Chaika Yu. 1, Golimbet V.1 | 1 Mental Health Research Center, Moscow, Russia |
| [Sym 03] 1. Structural biology of proteins, nucleic acids and membranes | Integrative structural and topological analysis of the NaPi2b transporter in the tumor microenvironment: discrepancy in sensitivity between traditional Molecular Dynamics metrics and Network Centrality Analysis | Vlasenkova Ramilia | Vlasenkova R.A.¹*, Bogdanov M.V.², Kiyamova R.G.¹, Akberova N.I.¹ | 1 Biomarker Research Laboratory, Institute of Fundamental Medicine and Biology, Kazan (Volga Region) Federal University, Kazan, Russia; 2 McGovern Medical School, The University of Texas Health Science Center at Houston, Houston, TX, USA |
| [Sym 03] 1. Structural biology of proteins, nucleic acids and membranes | Antimicrobial plant peptides, alpha-harpinins, inhibit protein biosynthesis by binding to rRNA | Akhmedzyanov Mikhail | Akhmedzyanov M.A1,2*, Ryazantsev D.Y2., Rogozhin E.A.2,3 | 1 MoscowInstitute of Physics and Technology, Dolgoprudny, Moscow Region, Russia; 2 M.Shemyakinand Yu. and A.Ovchinnikov Institute of Bioorganic Chemistry, Russian Academy of Sciences, Moscow, Russia; 3 All-Russian Institute of Plant Protection, St.Petersburg-Pushkin, Russia |
| [Sym 03] 1. Structural biology of proteins, nucleic acids and membranes | Conformational dynamics and species specificity of chymosin interaction with κ-casein in cow and dolphin: a comparative analysis by molecular docking and molecular dynamics simulations | Ilyina Margarita | Ilyina M.1*, Borisevich S.1,2, Khamitov E.2, Shcherbakov D.3,4, Arkhipov S.1 | 1 Synchrotron Radiation Facility - Siberian Circular Photon Source "SKlF" Boreskov Institute of Catalysis of Siberian Branch of the Russian Academy of Sciences (SRF "SKIF"), Koltsovo, Russia; 2 Ufa Institute of Chemistry, Ufa Federal Research Center of the Russian Academy of Sciences, Ufa, Russia; 3 State Research Center of Virology and Biotechnology Vector, Koltsovo, Russia; 4 Altai State University, Barnaul, Russia |
| [Sym 03] 1. Structural biology of proteins, nucleic acids and membranes | Solution-state structure of Kindia tick virus RNA untranslated regions revealed by Small-Angle X-ray scattering | Radchenko Daria Andreevna | Radchenko D.1*, Yanshin A.1,2, Ukladov E.2,3, Ryzhykau Yu.4, Gladysheva A.1 | 1 State research center of virology and biotechnology “Vector” Rospotrebnadzor, Koltsovo, Russia; 2 Physics Department, Novosibirsk State University, Novosibirsk, Russia3SRF “SKIF”, 630559 Kol’tsovo, Russia4Research Center for Molecular Mechanisms of Aging and Age-Related Diseases, Moscow Institute of Physics and Technology, 141701 Dolgoprudny, Russia |
| [Sym 03] 1. Structural biology of proteins, nucleic acids and membranes | Tacheng Tick Virus 1 Nucleoprotein: Structural Modeling, Purification, and Hypothesis of Oligomerization Initiation Mechanism | Radchenko Nikita Sergeevich | Radchenko N.1, *, Gladysheva A.1 | 1 State research center of virology and biotechnology “Vector” Rospotrebnadzor, Koltsovo |
| [Sym 03] 1. Structural biology of proteins, nucleic acids and membranes | Comparative structural analysis and development of consensus models for RALF, PEP, PIP, and EPFL signaling peptide families as a tool for functional annotation | Ageeva Victoria Sergeevna | Ageeva V.S.1,2,3*, Barashkova A.S.2,3, Rogozhin E.A.2,3 | 1 Faculty of Bioengineering and Bioinformatics, Lomonosov Moscow State University, Moscow, Russia; 2 Shemyakin-Ovchinnikov Institute of Bioorganic Chemistry, Russian Academy of Sciences, Moscow, Russia; 3 All-Russian Institute of Plant Protection, Saint Petersburg, Russia |
| [Sym 03] 1. Structural biology of proteins, nucleic acids and membranes | Structural annotation of the Haseki tick virus polyprotein: characterization of the first structural SP1 protein by combined AI-based prediction and small-angle X-ray scattering | Osinkina Irina | Osinkina I.1*, Gladysheva A.1., Yanshin A.1,2, Ukladov E.2,3, Ryzhykay Y.4 | 1 State Research Center of Virology and Biotechnology “Vector”, Kol’tsovo, Russia; 2 Novosibirsk State University, Novosibirsk, Russia; 3 SRF “SKIF”, Kol’tsovo, Russia; 4 Research Center for Molecular Mechanisms of Aging and Age-Related Diseases, Moscow Institute of Physics and Technology, Dolgoprudny, Russia |
| [Sym 03] 1. Structural biology of proteins, nucleic acids and membranes | Identifying single mutations to improve the thermal stability of a lumazine-binding fluorescent protein using generative artificial intelligence. | Afanasev Arsenii | Kuznetsova E.1, Bugrova A.1, Afanasev A.1*, Semenova Yu.1, Remeeva A.1, Guschin I.1 | 1 Moscow Institute of Physics and Technology (National Research University), Dolgoprudny, Russia |
| [Sym 03] 1. Structural biology of proteins, nucleic acids and membranes | "Molecular portrait" of the ion-conducting pore of TRPV1 characterizes its structural and physicochemical organization | Trofimov Yury | Trofimov Yu.A.1*, Lazarev I.V.1,2, Veretenenko I.I. 1,2 Efremov R.G. 1,2,3,4 | 1 Shemyakin-Ovchinnikov Institute of Bioorganic Chemistry RAS, Moscow, Russia; 2 Moscow Institute of Physics and Technology (State University), Dolgoprudny, Russia; 3 National Research University Higher School of Economics, Moscow, Russia.4 Research Institute for Systems Biology and Medicine, Moscow, Moscow, Russia. |
| [Sym 03] 1. Structural biology of proteins, nucleic acids and membranes | Comparative analysis of the in silico models of the Na-dependent phosphate transporter NaPi2b with different disulphide bonds in the large extracellular domain | Medvedev Egor Vladimirovich | Medvedev E.V.1*, Akberova N.I.1 | 1 Institute of Fundamental Medicine and Biology, Kazan (Volga region) Federal University, Kazan, Russia |
| [Sym 03] 1. Structural biology of proteins, nucleic acids and membranes | Effects of cysteine 328 substitutions on the structure of the large extracellular domain of NaPi2b transporter | Shaidullina Alina | Shaidullina A.¹*, Akberova N.¹ | ¹ Institute of Fundamental Medicine and Biology, Kazan (Volga Region) Federal University, Kazan, Russia |
| [Sym 03] 1. Structural biology of proteins, nucleic acids and membranes | Molecular modeling of pH-dependent conformational dynamics of rIGSRNA28 under conditions of acidosis | Karpushkina Irina Alexandrovna | Karpushkina I.A.1*, Shestun P.A.1, Mokin Ya.I.2, Gavrilova A.A.2, Dubrovin E.V.3, Fonin A.V.2 | 1 ITMO University, Saint Petersburg, Russia; 2 Institute of Cytology and Genetics, SB RAS, Novosibirsk, Russia; 3 A.N. Frumkin Institute of Physical Chemistry of the Russian Academy of Sciences, Moscow, Russia |
| [Sym 03] 1. Structural biology of proteins, nucleic acids and membranes | SARS-CoV-2 spike protein’s HR2 domain: the molecular determinant for membrane activity and possible role during membrane fusion | Aliper Elena | Elena T. Aliper1*, Roman G. Efremov1,2,3 | 1 Shemyakin-Ovchinnikov Institute of Bioorganic Chemistry, Russian Academy of Sciences, Moscow, Russia; 2 Research Institute for Systems Biology and Medicine, Moscow, Russia; 3 National Research University Higher School of Economics, Moscow, Russia |
| [Sym 03] 1. Structural biology of proteins, nucleic acids and membranes | Glycine pairs (Gly-Gly) in the amino acid sequences of collagens are one of the mechanisms for maintaining their structural and functional stability | Meshcheryakova Olga Vladimirovna | Meshcheryakova O.1*, Bogdanov M.2, Efimov A.3 | 1 Centre for Biomedical Research, KarRC RAS Petrozavodsk, Russia2Faculty of Applied Informatics, ITMO University, St.Petersburg, Russia3Institute of Protein Research, RAS, Pushchino, Moscow Region, Russia |
| [Sym 03] 1. Structural biology of proteins, nucleic acids and membranes | Development of an approach for the identification of Light-Oxygen-Voltage (LOV) domains within the PAS superfamily | Anuchina Arina | Anuchina A.1*, Gushchin I.1 | 1 Moscow Institute of Physics and Technology, Dolgoprudny, Russia |
| [Sym 03] 1. Structural biology of proteins, nucleic acids and membranes | Study of damage in the DNA structure under the influence of ionizing radiation of various natures | Paston Sofia | Paston S.V.1*, Kotb O.M.2,3, Murzakova I.F.1, Ivanova D.N.1 | 1 Saint Petersburg State University, The Faculty of Physics, Saint Petersburg, Russia; 2 Laboratory of Radiation Biology, JINR, Dubna, Moscow, Russia; 3 Physics Department, Faculty of Science, Zagazig University, Zagazig (Egypt). |
| [Sym 03] 1. Structural biology of proteins, nucleic acids and membranes | Effect of synthetic peptide on hERG channel activity | Pivovarov Egor Maksimovich | Pivovarov E.1*, Li B.1,2, Sokolova O.1,2 | 1 Faculty of Biology, Moscow State University, Moscow, Russia; 2 Faculty of Biology, Shenzhen MSU-BIT University, Shenzhen, China |
| [Sym 03] 2. Pharmacology, cheminformatics and chemical biology | Development of Inhibitors for the E. coli LpxC Protein to Overcome Antibiotic Resistance in Gram-Negative Bacteria | Sotnichenko Ekaterina | Krylova T.V.1, Kshondzer T.A.2, Nikitina T.V.3, Sotnichenko E.D.4*, Karpova L.A.5, Anashkina A.A.6 | 1 Ryazan State Medical University, Ryazan, Russia; 2 Institute of Pharmacy, Sechenov University, Moscow, Russia; 3 Faculty of Fundamental Medicine, Lomonosov Moscow State University, Moscow, Russia; 4 Institute for Digital Biodesign and Modelling of Living Systems, Sechenov University, Moscow, Russia; 5 Saint Petersburg Chemical and Pharmaceutical University, Saint Petersburg, Russia; 6 Engelhardt Institute of Molecular Biology, RAS, Moscow, Russia |
| [Sym 03] 2. Pharmacology, cheminformatics and chemical biology | New C3-Hetaryl-Substituted Imidazo[1,2-a]pyridines as Potential COX-1 and COX-2 Inhibitors: In Silico Analysis Based on Multiple Docking and a Neural-Network Model | Sarapultsev Alexey P | Trestsova M.A.1,2.3, Andreeva D.A.1, Sarapultsev A.P.3, Vassiliev P.M.4, Utepova I.A.1,2,3*, Chupakhin O.N.1,2 | 1 Ural Federal University, Ekaterinburg, Russia; 2 Institute of Organic Synthesis, Ural Branch of the Russian Academy of Sciences, Ekaterinburg, Russia; 3 South Ural State University, Chelyabinsk, Russia; 4 Volgograd State Medical University, Volgograd, Russia |
| [Sym 04] Big biological data analysis, ontologies and artificial intelligence | Using AI-Based Robotics in Humanitarian Logistics and Education service in Fragile Situations: INGOs experience with Afghanistan | Noori Abdul Saboor | Abdul Saboor Noori*1 | 1 Federal State Autonomous Educational Institution of Higher Education International Relations, "Ural Federal University named after the first President of Russia B.N. Yeltsin", Russia, Yekaterinburg* |
| [Sym 04] Big biological data analysis, ontologies and artificial intelligence | OrthoML2GO: a hybrid approach for protein function annotation based on homology, orthogroups and machine learning | Malyugin Evgeny | Malyugin E.1,3*, Afonnikov D.2,3 | 1 Novosibirsk State University, Novosibirsk, Russia; 2 Institute of Cytology and Genetics, SB RAS, Novosibirsk, Russia; 3 Kurchatov Genomic Center of the Institute of Cytology and Genetics, SB RAS, Novosibirsk, Russia |
| [Sym 04] Big biological data analysis, ontologies and artificial intelligence | Ontologies in modelling and analysing of big genetic data | Podkolodnyy Nikolay Leontyevich | Podkolodnyy N.L.1,2,3*, Podkolodnaya O.A.1, Ivanisenko V.A.1, Marchenko M.A.2.3 | 1 Institute of Cytology and Genetics of the Siberian Branch of the Russian Academy of Sciences, Novosibirsk, Russia; 2 Institute of Computational Mathematics and Mathematical Geophysics of the Siberian Branch of the Russian Academy of Sciences, Novosibirsk, Russia; 3 Novosibirsk State University, Novosibirsk, Russia |
| [Sym 04] Big biological data analysis, ontologies and artificial intelligence | Sequence-based models for RNA-Protein interactions imputation might be insufficient for novel signal prediction in eCLIP data | Khlebnikov Daniil Alekseevich | A.K. Rybakov (1), D.A. Khlebnikov (1,2*), D.Yu. Ovchinnikova (1), A.I. Nikolskaya (1,2), A.O. Zinkevich (1), A.A. Mironov (1,2). | 1 Faculty of Bioengineering and Bioinformatics of Lomonosov Moscow State University; 2 Vavilov Institute of General Genetics of Russian Academy of Sciences |
| [Sym 04] Big biological data analysis, ontologies and artificial intelligence | Kinship analysis using WGS | Pilipenko Mariia Nikolaevna | Pilipenko M.N.1*, Sukhikh N.A.1, Grammatikati K.S.1, Frolova L.V.1, Mitrofanov S.I.1 | 1 Federal State Budgetary Institution «Centre for Strategic Planning and Management of Biomedica lHealth Risks» of the Federal medical and biological agency (Centre for Strategic Planning, of the Federala nd Biological Agency), Moscow, Russia |
| [Sym 04] Big biological data analysis, ontologies and artificial intelligence | ChatGPT-like tools in Bioinformatics: comparative analysis of ExpasyGPT, STRING-Chat, and MEGA-GPT | Syrovatskaya Yana | Syrovatskaya Y.1*, Orlov Y.1,2 | 1 I.M. Sechenov First Moscow State Medical University (Sechenov University), Moscow, Russia; 2 Institute of Cytology and Genetics, SB RAS, Novosibirsk, Russia |
| [Sym 04] Big biological data analysis, ontologies and artificial intelligence | Toward Robust Antibody Language Models: Germline Bias, Chain Separation, and Multimodal Design | Trofimova Ekaterina | Trofimova E.1*, Shaburova E.1,2, Antonets D. 1 | 1 MSU Institute for Artificial Intelligence, Lomonosov Moscow State University, Moscow, Russia; 2 Institute of Cytology and Genetics, SB RAS, Novosibirsk, Russia |
| [Sym 04] Big biological data analysis, ontologies and artificial intelligence | Infrastructure for Virome Data Processing with Integrated Artificial Intelligence Methods | Fedorov Dmitry | Fedorov D.E.*¹, Kuzmichenko P.A.¹, Gukin E.G.¹, Vereshchagin M.A.¹, Krivonos D.V.¹, Galeeva Yu.S.¹, Popov N.S.¹, Paramonenko P.K.¹, Manolov A.I.¹, Ilina E.N.¹ | 1 Research Institute for Systems Biology and Medicine (RISBM), Moscow, Russia |
| [Sym 04] Big biological data analysis, ontologies and artificial intelligence | Algorithm for calculating protein functional similarity based on gene ontology. | Martynova Ksenia Konstantinovna | Martynova K.K.1*, Mokin Y.I.2, Fonin A.V.2 | 1 SPBAU of the Russian Academy of Sciences named after Zh. I. Alferov, Saint Petersburg, Russia; 2 Institute of Cytology of the Russian Academy of Sciences, Saint Petersburg, Russia |
| [Sym 04] Big biological data analysis, ontologies and artificial intelligence | Somatotype AI prediction models based on bioimpedance data in the prospective male cohort of the Russian Children's Study | Vitalik Bezuglov | Bezuglov V.1,2*, Rudnev S.3, Ashapkin V.1, Shtratnikova V.1, Sergeyev O.1,4,5 | 1 Belozersky Institute of Physico-Chemical Biology, Lomonosov Moscow State University, Moscow, Russia; 2 Faculty of Bioengineering and Bioinformatics, Lomonosov Moscow State University, Moscow, Russia; 3 Marchuk Institute of Numerical Mathematics, Moscow, Russia; 4 Skolkovo Institute of Science and Technology, Moscow, Russia; 5 Research Centre for Medical Genetics, Moscow, Russia |
| [Sym 04] Big biological data analysis, ontologies and artificial intelligence | Using DNA Motifs for Biologically Meaningful Tokenization of Genomic Sequences in Large Language Model Training | Makus Julia | Makus Yu.V.1,2*, Ashniev G.A.1,2, Orlov A.V.1,2 | 1 Central University, Moscow, Russia; 2 Prokhorov General Physics Institute of the Russian Academy of Sciences, Moscow, Russia |
| [Sym 04] Big biological data analysis, ontologies and artificial intelligence | Targeting tissue specificity in nucleic acid sequence design via activity set conditioning | Zinkevich Arsenii | Rybakov A.K.1, Aristova E.O.1,2, Penzar D.D.2, Kulakovskiy I.V. 2,3, Zinkevich A.O. 1* | 1 Faculty of Bioengineering and Bioinformatics, Lomonosov Moscow State University, 119991, Moscow, Russia; 2 Vavilov Institute of General Genetics, Russian Academy of Sciences, 119991, Moscow, Russia; 3 Institute of Protein Research, Russian Academy of Sciences, 142290, Pushchino, Russia |
| [Sym 04] Big biological data analysis, ontologies and artificial intelligence | Predictionof ChIP-seq peak height using machine learning methods | Maltseva Anastasia | Maltseva A.1,2, Ivanisenko V.1 | 1 Institute of Cytology and Genetics, SB RAS, Novosibirsk, Russia; 2 Novosibirsk State University, Novosibirsk, Russia |
| [Sym 04] Big biological data analysis, ontologies and artificial intelligence | Accelerating Drug Discovery in Neuro-Oncology: An Integrated Machine Learning and Virtual Screening Approach in Glioma | Mohammad Shahzeb Khan | Mohammad Shahzeb Khan, Romana Ishrat | Centre for Interdisciplinary Research in Basic Sciences (CIRBSC), Jamia Millia Islamia, New Delhi, India |
| [Sym 05] Medical, population, and evolutionary genomics/genetics of humans | Benchmarking Approaches to Identify Pleiotropic Genes Mediating Genetic Disease Correlations | Zorkoltseva Irina | Zorkoltseva I.V.*, Belonogova N.M., Kirichenko A.V., Tsepilov Y.A., Axenovich T.I. | 1 Institute of Cytology and Genetics, SB RAS, Novosibirsk, Russia |
| [Sym 05] Medical, population, and evolutionary genomics/genetics of humans | Method for the classification of sacroiliitis from plain pelvic radiographs | Bogomolov Anton Gennadievich | Tyshkevich E.1, Bogomolov A.2,3 *, Omelchenko V.4, Lashin S.2,3 | 1 Novosibirsk State University, Novosibirsk, Russia: 2 Institute of Cytology and Genetics, SB RAS, Novosibirsk, Russia; 3 Kurchatov Genomic Center of the Institute of Cytology and Genetics, SB RAS, Novosibirsk, Russia; 4 Research Institute of Clinical and Experimental Lymрhology - Branch of the Institute of Cytology andGenetics, SB RAS, Novosibirsk, Russia |
| [Sym 05] Medical, population, and evolutionary genomics/genetics of humans | A computational pipeline for fluorescence in situ hybridization image enhancement | Bogomolov Anton Gennadievich | Bogomolov A. 1,2*, Lashin S.1,2, Rubtsov N.1 | 1 Institute of Cytology and Genetics, SB RAS, Novosibirsk, Russia; 2 Kurchatov Genomic Center of the Institute of Cytology and Genetics, SB RAS, Novosibirsk, Russia |
| [Sym 05] Medical, population, and evolutionary genomics/genetics of humans | An Efficient REML Algorithm for Estimating Local Heritability from GWAS Summary Statistics | Svishcheva Gulnara R | Svishcheva G.R.1,2*, Tsepilov Ya.A.1, Axenovich T.I.1 | 1 Institute of Cytology and Genetics, SB RAS, Novosibirsk, Russia; 2 Vavilov Institute of General Genetics, RAS, Moscow, Russia |
| [Sym 05] Medical, population, and evolutionary genomics/genetics of humans | Clinically Relevant Mitochondrial Mutational Burden in Medieval Russian Populations: An Evolutionary Genomics Perspective | Zhukova Mariia | Zhukova M.1* | 1 Institute of General Pathology and Pathophysiology, Moscow, Russia |
| [Sym 05] Medical, population, and evolutionary genomics/genetics of humans | Association of IL4, IL5, and IL13 gene polymorphisms inchildren with severe bronchial asthma in Russia | Smolnikova Marina | Smolnikova. M.V. 1 *, Mileyko A.G. 1, Afonicheva K.V. 1, Hilazheva E.D. 1, Gorbacheva N.N. 1, Gerasimova T.A. 1, Kuvshinova E.V. 1, Konurkina N.S. 1, Tereshchenko S.Y. 1 | «Scientific Research Institute of Medical Problems of the North» - separate subdivision of «Federal Research Center “Krasnoyarsk Scientific Center of the Siberian Branch of the Russian Academy of Sciences» (FRC KSC SB RAS), Krasnoyarsk, Russia. |
| [Sym 05] Medical, population, and evolutionary genomics/genetics of humans | Clinical Re-analysis of Whole Exomes Outside Specialized Genetic Laboratories: Isolated Software Solutions for Clinical, Educational, and Research Applications | Korneenkov Alexei A. | Koreneenkov A.*, Vyazemskaya E., Medvedeva A. | St. Petersburg Research Institute of Ear, Throat, Nose and Speech, Ministry of Health of Russia, St.Petersburg, Russia |
| [Sym 05] Medical, population, and evolutionary genomics/genetics of humans | The interaction of DR-DQ HLA haplotypes and the heterogeneity of the immune response to antibodies in T1D. | Telnaya Elizaveta Andreevna | E.A. Telnaya¹*, E.S. Petriaikina¹, D.I. Tychinin¹, D.V. Svetlichny¹ | ¹Center for Strategic Planning and Management of Biomedical Health Risks, Federal Medical and Biological Agency.Pogodinskaya St. 10, bldg. 1, Moscow, 119121, Russia |
| [Sym 05] Medical, population, and evolutionary genomics/genetics of humans | Aberrant methylation of gene promoter regions in chorionic villiin intrauterine embryonic death during the first trimester of pregnancy | Zuev Andrew | Zyev A.S.*, Shevtsov D.G., Nikitina T.V., Sazhenova E.A., Tolmacheva E.N., Vasilyev S.A. | Research Institute of Medical Genetics, Tomsk National Research Medical Center of the Russian Academyof Sciences, Tomsk, Russia |
| [Sym 05] Medical, population, and evolutionary genomics/genetics of humans | Integrative Genetic Architecture of Aggressive Behavior: From Candidate Genes to Epistasis and X-Chromosome Mosaicismina Monoethnic Armenian Cohort | Lazebny Oleg Evgenievich | Lazebny O.E. 1*, Proshakov P.A. 1, Revyakina L.A. 1, Mkrtchyan R.A. 2, ButovskayaM.L. 3, Kulikov A.M. 1 | 1 Koltzov Institute of Developmental Biology, Russian Academy of Sciences, Moscow, Russia; 2 Yerevan State University, Yerevan, Armenia; 3 Miklukho-Maklai Institute of Ethnology and Anthropology, Russian Academy of Sciences, Moscow, Russia |
| [Sym 05] Medical, population, and evolutionary genomics/genetics of humans | Comparative expression analysis of muscle strength-associated genes | Mukhametshina Albina | Mukhametshina A.¹*, Mukhametshina R.¹, Sultanov R.I.2, Zhelankin A.V.2, KuleminN.A.2, Generozov E.V.2, Ahmetov I.I. 2 | 3 Kazan State Medical University, Kazan, Russia |
| [Sym 05] Medical, population, and evolutionary genomics/genetics of humans | Association analysis of the rs6119285 polymorphic variant in the DNMT3B gene with schizophrenia in the Siberian population of Russians | Marusin Andrei Viktorovich | Marusin A.V.1*, Swarovskaja M.G.1,2, Kornetov A.N.3,4,5, Bocharova A.V.1, StepanovV.A.1 | 1 Research Institute of Medical Genetics, Tomsk Research Medical Center of the Russian Academy of Sciences, Tomsk, Russian Federation; 2 Institution of Higher Professional Education Siberian State Medical University of the Ministry of Healthof the Russian Federation, Tomsk, Russian Federation; 3 Mental Health Research Institute, Tomsk Research Medical Center of the Russian Academy of Sciences, Tomsk, Russian Federation; 4 Federal State Budgetary Educational Institution of Higher Education “Prof. V.F. Voino-YasenetskyKrasnoyarsk State Medical University” of the Ministry of Health of the Russian Federation, Krasnoyarsk, Russian Federation; 5 Federal State Budgetary Educational Institution of Higher Education “Kemerovo State MedicalUniversity" of the Ministry of Health of the Russian Federation, Kemerovo, Russian Federation |
| [Sym 05] Medical, population, and evolutionary genomics/genetics of humans | Impaired Colonization Resistance and Transit Migration of Oral Taxa to the Gut in the Pathogenesis of COVID-19 | Galeeva Iuliia | Galeeva I.1*, Ilina E.1 | 1 Research Institute for Systems Biology and Medicine (RISBM), Russia |
| [Sym 05] Medical, population, and evolutionary genomics/genetics of humans | Breakpoint of structural variants analysis in EXT1/EXT2 genes in patients with multiple osteochondromas | Firova Roxalana Khazhismelovna | Firova R.¹*, Ogorodova N.¹, Gorodilova D.¹ Petrusenko Y.2, Sherstyukova D.¹, Skoblov M.¹, Shchagina O.¹, Borovikov A.¹ | 1 Research Centre for Medical Genetics, Moscow, Russia; 2 Biotech Campus LLC, Moscow, Russia |
| [Sym 05] Medical, population, and evolutionary genomics/genetics of humans | Analysis of Genes with Skewed Distribution of Loss-of-Function Variants | Malysheva Ekaterina | Malysheva E.V.¹, Ryzhkova O.P.¹, Borovikov A.O.¹ | ¹ Research Centre for Medical Genetics, Moscow, Russia |
| [Sym 05] Medical, population, and evolutionary genomics/genetics of humans | The frequency of obesity-related gene polymorphisms among residents of the Nizhny Novgorod Region and the Republic of Sakha. | Chumankina Nadezhda Andreevna | Chumankina N.1, Rashidova L.1, Shashnin D.1, Vedunova M.V.1 | 1 Lobachevsky State University of Nizhni Novgorod (UNN), Nizhniy Novgorod, Russia |
| [Sym 05] Medical, population, and evolutionary genomics/genetics of humans | Use of a pangenome reference assembly to improve variant detection accuracy in complex genomic regions: a case study of the SORD gene | Lebedev Nikolai Viktorovich | Lebedev N.1*, Murtazina A.1, Pustoshilov D.2, Subbotin D.1, Bezkorovainyi N.1, Ryzhkova O.1, Borovikov A.1 | 1 Research Centre for Medical Genetics, Moscow, Russia; 2 “Biotech Campus” LLC., Moscow, Russia |
| [Sym 05] Medical, population, and evolutionary genomics/genetics of humans | The frequency of pathogenic / likely pathogenic variants in theATP7B gene in populations of the Volga-Ural region and North Caucasian according to the data of whole genome sequencing | Akhmetshin Askar | Akhmetshin A.A.1*, Karunas A.S.1*, Khidiyatova I.M.1, Chekanov N.N.2, Khusnutdinova E.K.1 | 1 Institute of Biochemistry and Genetics - a separate structural division of the Ufa Federal ResearchCenter of the Russian Academy of Sciences71, Pr. Oktyabrya, Ufa, 450054, Russian Federation; 2 Biotechnological Campus LLC |
| [Sym 05] Medical, population, and evolutionary genomics/genetics of humans | Immunogenetic features of adaptation of the Turkic peoples of the Volga-Ural region: analysis of the genes of the HLA complex | Sufyanova Zemfira Railovna | Sufyanova Z.R.1*, Ekomasova N.V.1,2, Dzhaubermezov M.A.1,2, Akhmetshin A.A.2, Gabidullina L.R.1, Khidiyatova I.M.1,2, D.S. Prokofyeva1, Karunas A.S.1,2, ChekanovN.N.3, E.K. Khusnutdinova1,2. | 1 Federal State Budgetary Educational Institution of Higher Education «Ufa University of Science andTechnology», Ufa, Russia; 2 Institute of Biochemistry and Genetics, Ufa Federal Research Center of the Russian Academy of Sciences, Ufa, Russia; 3 Biotech Campus LLC, Moscow, Russia |
| [Sym 05] Medical, population, and evolutionary genomics/genetics of humans | Developing approaches to define population-specific HLA allele sand haplotypes associated with Type 1 Diabetes in Russian and Dagestani cohorts | Panteleev Dmitry | Panteleev D. 1*, Dvoryanchikov Y. 1, Khusainova R. 1, Minniakhmetov I. 1, MokryshevaN. 1 | 1 Endocrinology Research Center, Moscow, Russian Federation |
| [Sym 06] Fundamental questions in evolutionary systems biology: from genes and gene networks to populations and ecosystems | Evolutionary characteristics of the gene network of the cell cycle. | Turnaev Igor | Turnaev I.I. 1.2*, Ivanov R.A.1, Lashin S.A, 1,2,3, Afonnikov D.A, 1,2,3 | 1 Institute of Cytology and Genetics, SB RAS, Novosibirsk, Russia; 2 Kurchatov Genomic Center of the Institute of Cytology and Genetics, SB RAS, Novosibirsk, Russia; 3 Novosibirsk State University, Novosibirsk, Russia |
| [Sym 06] Fundamental questions in evolutionary systems biology: from genes and gene networks to populations and ecosystems | Spatial heterogeneity and species coexistence | Zhdanova Oksana L. | Giricheva E.1, Zhdanova O.1* | 1 Institute for Automation and Control Processes, FEB RAS, Vladivostok, Russia |
| [Sym 06] Fundamental questions in evolutionary systems biology: from genes and gene networks to populations and ecosystems | Assessment of phytoplankton productivity in Peter the Great Bay based on satellite data | Kozitskaya Irina | Kozitskaya I.1*, Zhdanova O.1 | 1 Institute for Automation and Control Processes, FEB RAS, Vladivostok, Russia |
| [Sym 06] Fundamental questions in evolutionary systems biology: from genes and gene networks to populations and ecosystems | Subfunctionalisationof GST genes in bivalves as a result of gene duplication | Vodiasova Ekaterina | Vodiasova E.A.*, Uppe V.A., Chelebieva E.S., Kladchenko E.S., Dmitrieva E.V. | A.O. Kovalevsky Instituteof Biology of the Southern Seas of RAS, Sevastopol, Russia |
| [Sym 07] Plant genomics, genetics and systems biology | Photosynthetic efficiency of grapevine genotypes in CO₂ capture | Alexandrov Eugeniu Gheorghe | Alexandrov E. | Institute of Genetics, Physiology and Plant Protection, Moldova State University, Chișinău, Republic of Moldova |
| [Sym 07] Plant genomics, genetics and systems biology | The Origin of the Grapevine (Vitaceae Juss.) | Alexandrov Eugeniu Gheorghe | Alexandrov E. | Institute of Genetics, Physiology and Plant Protection, Moldova State University, Chișinău, Republic of Moldova |
| [Sym 07] Plant genomics, genetics and systems biology | Transcriptional activity of transport protein genes in Brassicajuncea leaves under increasing zinc content in the environment | Kaznina Natalia Mstislavovna | Kaznina N.1*, Repkina N.1, Titov A.1 | Institute of Biology of the Karelian Research Centre of the Russian Academy of Sciences |
| [Sym 07] Plant genomics, genetics and systems biology | Analysis of DNA markers genetically linked to economically valuable traits in certain varieties and accessions of soybean(Glycine max (L.) Merr.). | Kurbanbaev Ilkham Dzhumanazarovich | Kurbanbayev I.¹*, Utayev M.¹, Juraev J.¹, Abdushukirova S.¹, Dolimov A.² | 1 Institute of Genetics and Plant Experimental Biology, Academy of Sciences of the Republic of Uzbekistan, Tashkent, Uzbekistan; 2 Institute of Plant Genetic Resources, Ministry of Agriculture of the Republic of Uzbekistan, Tashkent, Uzbekistan. |
| [Sym 07] Plant genomics, genetics and systems biology | Analysis of Variations and Genetic Diversity of Potato | Karetnikov Dmitry Igorevich | Karetnikov D.I.1,2*, Vasiliev G.V.1,2, Toshchakov S.V.3, Genaev M.A.1,2, NesterovM.A.1,2, Ibragimova S.M.1,2, Gavrilenko T.A.4, Salina E.A.1,2, Patrushev M.V.3, Kochetov A.V.1,2, Afonnikov D.A.1,2 | 1 Institute of Cytology and Genetics, SB RAS, Novosibirsk, Russia; 2 Kurchatov Genomic Center of the Institute of Cytology and Genetics, SB RAS, Novosibirsk, Russia; 3 Kurchatov Institute, Moscow, Russia; 4 N.I. Vavilov All-Russian Institute of Plant Genetic Resources, St. Petersburg, Russia |
| [Sym 07] Plant genomics, genetics and systems biology | Genetic diversity and selection footprints of barley varieties (Hordeum vulgare L.) cultivated in Russia | Afonnikova Svetlana | Afonnikova S.1*, Pronozin A.1, Kiseleva A.1, Piskarev V.2, Sotnik A.2, Vasiliev G.1, Afonnikov A.1, Salina E.1 | 1 Institute of Cytology and Genetics, Siberian Branch of the Russian Academy of Sciences, Russia; 2 Siberian Research Institute of Plant Production and Breeding, Russia |
| [Sym 07] Plant genomics, genetics and systems biology | Development of allele-specific markers for starch and sugar metabolism genes in Russian potato cultivars | Sergeeva Ekaterina | Sergeeva E.1*, Karetnikov D.1, Batov A.2, Gureeva Yu. 2, Larichev K.1, Afonnikov D.1, Kochetov A. 1 | 1 Institute of Cytology and Genetics, SB RAS, Novosibirsk, Russia; 2 Siberian Research Institute of Plant Cultivation and Breeding, Branch of Institute of Cytology andGenetics, SB RAS, Novosibirsk, Russia |
| [Sym 07] Plant genomics, genetics and systems biology | Bioinformatic characterization of the repeatomes of Elymus species | Kroupin Pavel Yu. | Kroupin P.*, Yurkina A., Sokolova V., Divashuk M. | All-Russian Research Institute of Agricultural Biotechnology, Russian Academy of Agricultural Sciences, Moscow, Russia |
| [Sym 07] Plant genomics, genetics and systems biology | Search for potential Y-subgenome repeats in the genus Elymus | Kroupin Pavel Yu. | Kroupin P. *, Sokolova V., Yurkina A., Divashuk M. | All-Russian Research Institute of Agricultural Biotechnology, Russian Academy of Agricultural Sciences, Moscow, Russia |
| [Sym 07] Plant genomics, genetics and systems biology | A computational pipeline for wheat ear morphometry based on image analysis | Komyshev Evgeniy Gennadievich | Komyshev E.G.1,2*, Genaev M.A.1,2, Kruchinina Yu.V.1,2, Koval V.S. 1,2, GoncharovN.P.1, Afonnikov D.A.1,2 | 1 Institute of Cytology and Genetics, SB RAS, Novosibirsk, Russia; 2 Kurchatov Genomic Center of the Institute of Cytology and Genetics, SB RAS, Novosibirsk, Russia |
| [Sym 07] Plant genomics, genetics and systems biology | SpikeDroidDB Update: Digital Description of a Wheat Ear | Komyshev Evgeniy Gennadievich | Komyshev E.G.1,2*, Kruchinina Yu.V.1,2, Koval V.S.1,2, Poteshkina A.A.1,3, PetrashN.V.1,3, Piskarev V.V.1,3, Goncharov N.P.1, Afonnikov D.A.1,2 | 1 Institute of Cytology and Genetics, SB RAS, Novosibirsk, Russia; 2 Kurchatov Genomic Center of the Institute of Cytology and Genetics, SB RAS, Novosibirsk, Russia; 3 Siberian Research Institute of Plant Production and Breeding - Branch of the Institute of Cytology andGenetics, SB RAS, Novosibirsk, Russia |
| [Sym 07] Plant genomics, genetics and systems biology | Texture analysis of wheat grains from the ITMI collection | Avzalov Dmitry | Dmitry R. Avzalov¹*, Evgeniy G. Komyshev¹, Dmitry A. Afonnikov 1,2,3 | 1 Institute of Cytology and Genetics, Siberian Branch of the Russian Academy of Sciences, Novosibirsk, Russia; 2 Novosibirsk State University, Novosibirsk, Russia; 3 Kurchatov Genomic Center of the Institute of Cytology and Genetics, SB RAS, Novosibirsk, Russia |
| [Sym 07] Plant genomics, genetics and systems biology | Anthocyanin biosynthesis in garlic (Allium sativum L.) organs: comparative expression analysis data | Mikhail Filyushin | Filyushin M.1*, Shchennikova A.1, Kochieva E.1 | 1 Research Center of Biotechnology RAS, Moscow, Russia |
| [Sym 07] Plant genomics, genetics and systems biology | Identification of Loci and Candidate Genes Responsible for Grain Size and Shape in Winter Bread Wheat | Budyak Daniil Vladimirovich | Budyak D.V.¹*, Kiseleva A.A.¹, Salina E.A.¹ | ¹Institute of Cytology and Genetics SB RAS, Novosibirsk, Russia |
| [Sym 07] Plant genomics, genetics and systems biology | A pragmatic duplex read enrichment workflow for low-yield nanopore sequencing data | Emirsaliev Asan Osmanovich | Emirsaliev A.1 *, Afonnikov D.1,2,3, Mitrofanova I.4 | 1 Institute of Cytology and Genetics, Siberian Branch of Russian Academy of Sciences, 630090, Novosibirsk, Russia; 2 Kurchatov Center for Genome Research, Institute of Cytology and Genetics, Siberian Branch of RussianAcademy of Sciences, 630090, Novosibirsk, Russia; 3 Faculty of Natural Sciences, Novosibirsk State University, 630090, Novosibirsk, Russia; 4 N.V. Tsitsin Main Botanical Garden of Russian Academy of Science, 127276, Moscow, Russia |
| [Sym 07] Plant genomics, genetics and systems biology | Features of creating an analyzing background for differentiation of soybean lines by sensitivity to photoperiod | Avdeev Sergey | Avdeev S.M.*, Kocheshkova A.A., Kroupin P.U., Svistunova N.Yu., KanunnikovaV.Yu., Romashkina S.I., Karlov G.I., Divashuk M.G. | All-Russian Scientific Research Institute of Agricultural Biotechnology, Moscow, Russia |
| [Sym 07] Plant genomics, genetics and systems biology | Evaluation of Genetic Diversity in Yellow Lupin (Lupinus luteus L.) Cultivars Using Molecular Markers | Saleh Samuel | Saleh S.*, Shamustakimova A. | Federal Williams Research Center of Forage Production & Agroecology (FWRC FPA), Lobnya, Russia |
| [Sym 07] Plant genomics, genetics and systems biology | The adaptive response of maize plants to cold stress is associated with differential expression of carotenoid and ABA synthesis genes | Kochieva Elena | Khavpacheva D.Kh.1*, Shchennikova A.V.1, Kochieva E.Z.1 | 1 Federal Center of Biotechnology, RAS, Moscow, Russia |
| [Sym 07] Plant genomics, genetics and systems biology | Population-genomic analysis of a Russian Oryza sativa L collection | Erofeeva Natalia | Erofeeva N.O.1*, Grigorieva E.I.1, Ogly A.M.2, Esaulova L.V.2, Korotenko T.L.2, Bruskin S.A.1, Konstantinov D.K.1, Medvedev D.O.1 | 1 PLASTILIN Ltd., Moscow, Russia; 2 Federal state budgetary scientific institution "Federal Scientific Rice Centre", Krasnodar, Russia |
| [Sym 07] Plant genomics, genetics and systems biology | ITS-RIBOTYPING AS A TOOL FOR PHYLOGENETIC ANALYSIS AND CERTIFICATION OF PAEONIA L.SPECIES IN THE COLLECTION OF THE BOTANICAL GARDEN OF THE URAL BRANCH OF RAS | Napalkova Viktoriya | Napalkova V.V.*, Filippov E.G. | Botanical Garden of the Ural Branch of RAS, Yekaterinburg, Russia |
| [Sym 07] Plant genomics, genetics and systems biology | New data on the ploidy and variability of the ITS1-2 region of Betula tianschanica Rupr. | Medvedeva Svetlana | Medvedeva S.1*, Cherepanova O.1, Sattarov D.2, Teptina A. 3 | 1 Botanical Garden Ural Branch of the Russian Academy of Sciences, Yekaterinburg, Russia; 2 Center for Innovative Biology and Medicine, National Academy of Sciences of Tajikistan, Dushanbe, Republic of Tajikistan; 3 Ural Federal University named after the first President of Russia B.N. Yeltsin, Yekaterinburg, Russia |
| [Sym 07] Plant genomics, genetics and systems biology | Structural variants between genomes of Solanum tuberosum varieties with different ploidy | Shmakov Nikolai Aleksandrovitch | Shmakov N.1,2*, Afonnikov D.1,2, Dolgikh V.1,2, Ryabov Yu.1,2 | 1 Institute of Cytology and Genetics, SB RAS, Novosibirsk, Russia; 2 Kurchatov Genomic Center of the Institute of Cytology and Genetics, SB RAS, Novosibirsk, Russia |
| [Sym 07] Plant genomics, genetics and systems biology | The lipoxygenase pathway in rapeseed (Brassica napus): CYP74 enzymes and expression dynamics of their genes during ontogenesis | Gorina Svetlana | Gorina S.*, Toporkova Y. | Kazan Institute of Biochemistry and Biophysics - Subdivision of the Federal State budgetary Institution of Science “Kazan Scientific Center of the Russian Academy of Sciences”, Kazan, Russia |
| [Sym 07] Plant genomics, genetics and systems biology | Genetic Diversity and Population Structure in Trial Populations of Norway Spruce (Picea abies L.) | Tis Margarita | Tis M.1,2,3*, Martynova E.2, Pavlov N.2, Rojas B. Juan P.2, Jana R.B.2 | 1 INMO University, Saint-Petersburg, Russia; 2 Skolkovo Institute of Science and Technology, Moscow, Russia; 3 Saint Petersburg State Forestry University, Saint-Petersburg, Russia |
| [Sym 07] Plant genomics, genetics and systems biology | The Effect of Phosphorus Deficiency on the Growth and the Lipidome of Chlamydomonas reinhardtii | Bogdanova Ekaterina Miqhalovna | E.M. Bogdanova1,2, S.V. Senik1, E.R. Kolova1, R.K. Puzansky1,2* | 1 Komarov Botanical Institute of the Russian Academy of Sciences (BIN RAS), St. Petersburg, Russia; 2 Federal State Budgetary Educational Institution of Higher Education Saint Petersburg State University(SPbSU), 199034, Russia, Saint Petersburg |
| [Sym 07] Plant genomics, genetics and systems biology | Expression of fiber length and fiber yield traits in Gossypium hirsutum L. varieties. | Mutalov Abdusalom | Mutalov A.A.¹*, Ergashev O.R.¹, Abdurasulov Sh.E.¹, Alikulov E.O.¹, KhakimovA.E.¹ | 1 Institute of Genetics and Experimental Biology of Plants, Academy of Sciences of the Republic of Uzbekistan, Tashkent, Uzbekistan |
| [Sym 07] Plant genomics, genetics and systems biology | Analysis of the population structure of the “Kelajak-3” variety of G. hirsutum L. based on individual morphological traits. | Ergashev Orif | O.R. Ergashev¹*, I.T. Kakhkhorov¹, A.A. Mutalov¹, G.Ch. Kholliev2 | 1 Institute of Genetics and Experimental Biology of Plants, Academy of Sciences of the Republic of Uzbekistan, Tashkent, Uzbekistan; Tashkent State Agrarian University, Tashkent, Uzbekistan |
| [Sym 07] Plant genomics, genetics and systems biology | Expression of seed cotton weight per boll in G. hirsutum L.genotypes. | Sanayev Normumin | Sanaev N.N.¹*, Ergashev O.R.¹, Khakimov A.E.¹, Alikulov E.O.¹, Abdurasulov Sh.E.², Kholliev G.Ch.² | 1 Institute of Genetics and Experimental Biology of Plants, Academy of Sciences of the Republic of Uzbekistan, Tashkent, Uzbekistan; 2 Tashkent State Agrarian University, Tashkent, Uzbekistan |
| [Sym 07] Plant genomics, genetics and systems biology | The effect of phytohormones on the process of cell renewal in the root cap of Arabidopsis thaliana L. | Cherenko Viktoriya Aleksandrovna | Cherenko V.1*, Omelyanchuk N.1, Zemlyanskaya E.1 | 1 Siberian Research Institute of Plant Production and Breeding - Branch of the Institute of Cytology andGe-netics, SB RAS, Novosibirsk, Russia |
| [Sym 07] Plant genomics, genetics and systems biology | Comparative analysis of the systemic organization of cambium transcriptomes in forest treesin the context of longevity | Medvedeva Anastasia | Medvedeva A.Y.1, Krutovsky K.V.1,2,3,4 | 1 Siberian Federal University, Krasnoyarsk, Russia; 2 Georg-August University of Göttingen, Göttingen, Germany; 3 N.I. Vavilov Institute of General Genetics, Russian Academy of Sciences, Moscow, Russia; 4 G.F. Morozov Voronezh State University of Forestry and Technologies, Voronezh, Russia |
| [Sym 07] Plant genomics, genetics and systems biology | WRKY transcription factorsas potential regulators of tertiary cell wall formation in plant fibers | Syrchina Natalya Georgievna | Syrchina N.1*, Mokshina N.1 | 1 Institute of Biochemistry and Biophysics, FRC KazanScientific Center of RAS, Kazan, Russia |
| [Sym 08] 1. Genomics, genetics, and systems biology of laboratory animals and genetic models of human diseases | Effect of Prottremine on the preservation and functional activity of telencephalon neurons in the MPTP-induced zebrafish model of Parkinson’s disease | Bao Xixin | Bao X.1*, Timofeeva E.A.1, Ardashov O.V.2, Volcho K.P.2, Salakhutdinov N.F.2, Amstislavskaya T.G.1 | 1 Novosibirsk State University, Novosibirsk, Russia; 2 Vorozhtsov Novosibirsk Institute of Organic Chemistry, Novosibirsk, Russia |
| [Sym 08] 1. Genomics, genetics, and systems biology of laboratory animals and genetic models of human diseases | Conditional knockdown of proteins using auxin-inducible degron (AID) system during neural differentiation of mouse embryonic stem cells | Yunusova Anastasia | Yunusova A.1,2, Schnaider Т.1,2 | 1 Institute of Cytology and Genetics SB RAS, Novosibirsk, Russia; 2 Novosibirsk State University, Novosibirsk, Russia |
| [Sym 08] 1. Genomics, genetics, and systems biology of laboratory animals and genetic models of human diseases | Vortioxetine-glycyrrhizic acid complex: effect on microglial gene expression | Ryabushkina Yuliya | Ryabushkina Y.A. 1*, Ritter P.E. 1, Khantakova J.N. 1, Salman R. 1, Meteleva E.S. 1,2, Bondar N.P. 1 | 1 Institute of Cytology and Genetics, SB RAS, Novosibirsk, Russia; 2 Institute of Solid State Chemistry and Mechanochemistry, SB RAS, Novosibirsk, Russia |
| [Sym 08] 1. Genomics, genetics, and systems biology of laboratory animals and genetic models of human diseases | Molecular mechanisms of impaired emotional learning in an idiopathic model of autism | Chikina Evgeniia | Chikina E.1,2, Tsybko A.3, Voronina T.2,4, Starinnov Z.1,2, Melnikova V.1, Sabirov M.1,2, Bimpisidis Z.5, Nesmelov A.6, Kaminskaya Y.3, Gainullina A.1,2, Shagimardanova E.2,7, Naumenko V.3, Gusev O.2,4,8, and Romanov R.5,9 | 1 Koltzov Institute of Developmental Biology of the Russian Academy of Sciences, Moscow, Russia; 2 Life Improvement by Future Technologies (LIFT) Center, Moscow, Russia; 3 Institute of Cytology and Genetics, Russian Academy of Sciences, Novosibirsk; 4 FCBRN of FMBA, Moscow, Russia; 5 Center for Brain Research, Medical University of Vienna, Vienna, Austria; 6 Regulatory Genomics Research Center, Institute of Fundamental Medicine and Biology, Kazan Fed-eral University, Kazan, Russia; 7 Genomics and bioimaging Core Facility, Moscow, Russia; 8 Intractable Disease Research Center, School of Medicine, Juntendo University, Tokyo, Japan; 9 Comprehensive Center for Artificial Intelligence in Medicine, Medical University of Vienna, Vienna, Austria |
| [Sym 08] 1. Genomics, genetics, and systems biology of laboratory animals and genetic models of human diseases | Transcriptomic profiling of Acomys cahirinus skeletal muscle in response to ischemic injury | Perepechenov Stepan Sergeevich | Perepechenov S.1,2, Titova А.1,2, Shigapova L. 1,2, Khanmurzin А.1, Perepechenova К.1, Bolshakova D.1, Shagimardanova Е.3,4, Kiyasov А.1, Gusev О.2,4 | 1 Institute of Fundamental Medicine and Biology, Kazan (Volga Region) Federal University, Kazan, Russia; 2 Federal Center of Brain and Neurotechnologies, FMBA of Russia, Moscow, Russia; 3 Skolkovo Institute of Science and Technology, Moscow, Russia; 4 Life Improvement by Future Technologies (LIFT) Center, Moscow, Russia |
| [Sym 08] 2. Population and evolutionary genetics/genomics of wild and domestic animals and genetic models of experimental domestication | Identification of genetic determinants underlying temporal variation in sockeye salmon (Oncorhynchus nerka) spawning using ddRAD sequencing | Revel-Muroz Anastasia | Revel-Muroz A.Z.1, Khrustaleva A.M.1 | 1 Institute of Gene Biology, 34/5 Vavilova Street, 119334 Moscow, Russia |
| [Sym 08] 2. Population and evolutionary genetics/genomics of wild and domestic animals and genetic models of experimental domestication | Impact of CPG islands density on evolutionary conservation rate of long non-coding RNA in mammal clade. | Babenko Vladimir Nikolaevich | Babenko V.N.1 | 1 Institute of Cytology and Genetics, SB RAS, Novosibirsk, Russia |
| [Sym 09] 1. Microbial communities of natural and anthropogenic habitats, biocollections, creation of producer strains | Genetic Identification and Phylogenetic Analysis of the Mycological Fungi Collection at the Kurchatov Institute - VIAM | Krivushina Anastasia Aleksandrovna | Krivushina A.1, Startsev V.1, Mosunova D.1, Goryashnik Y.1, Yakovenko Т.1 | 1 Kurchatov Institute Research Center - VIAM, Moscow, Russia |
| [Sym 09] 1. Microbial communities of natural and anthropogenic habitats, biocollections, creation of producer strains | Features of the pathogenesis of endophytic bacteria during clonal micropropagation of fruit and berry crops | Kornatskiy Sergey Arkadyevich | Kornatskiy S. | 2 All-Russia Research Institute for Agricultural Microbiology, St. Petersburg, Russia |
| [Sym 09] 1. Microbial communities of natural and anthropogenic habitats, biocollections, creation of producer strains | Virome analysis of symptomatic phlox plants (Phlox paniculata) revealed three new viruses of this crop | Motsar Elena | Motsar E.1, Sheveleva A.1, Sharko F.2, Chirkov S.1 | 1 Faculty of Biology, Lomonosov Moscow State University, Moscow, Russia; 2 Russia National Research Center “Kurchatov Institute”, Moscow, Russia |
| [Sym 09] 1. Microbial communities of natural and anthropogenic habitats, biocollections, creation of producer strains | Graph-Based Similarity Analysis of Short Multilocus Genomic Data | Gorbacheva Alina Antonovna | Gorbacheva A.1, Gukov B.1, Shipulin G.A.1, Matsvay A.1 | 1 Federal State Budgetary Institution “Centre for Strategic Planning and Management of Biomedical Health Risks” of the Federal Medical Biological Agency, Moscow, Russia |
| [Sym 09] 1. Microbial communities of natural and anthropogenic habitats, biocollections, creation of producer strains | Information system for organizing bacterial strains collection | Petrushin Ivan | Petrushin I.S.1,2, Nikitchenko K.A.2, Markova Yu.A.1, Vasilyeva U.A.1 | 1 Siberian Institute of Plant Physiology and Biochemistry, Siberian Branch of the Russian Academy of Sciences, Irkutsk, Russia; 2 Irkutsk State University, Irkutsk, Russia |
| [Sym 09] 1. Microbial communities of natural and anthropogenic habitats, biocollections, creation of producer strains | Defense systems of intracellular parasites | Irioglov Roman Andreevich | Irioglov R.1,2, Alekseevskiy A.1,2,3 | 1 Belozersky Research Institute of Physical and Chemical Biology, Lomonosov MSU, Moscow, Russia; 2 Faculty of Bioengineering and Bioinformatics, Lomonosov MSU, Moscow, Russia; 3 Research Institute for System Analysis, RAS, Moscow, Russia |
| [Sym 09] 1. Microbial communities of natural and anthropogenic habitats, biocollections, creation of producer strains | Spatially-resolved functional annotation of CAZymes in the human gut microbiome: integrating GH-family classification and subcellular localization prediction | Ashniev German | Ashniev G.A.1,2,3, Orlov A.V.1, Gelfand M.S.2,3, Rodionov D.A.4 | 1 Central University, Moscow, Russia; 2 Skolkovo Institute of Science and Technology, Moscow, Russia; 3 A. A. Kharkevich Institute for Information Transmission Problems of the Russian Academy of Sciences, Moscow, Russia; 4 Sanford Burnham Prebys Medical Discovery Institute, La Jolla, USA |
| [Sym 09] 1. Microbial communities of natural and anthropogenic habitats, biocollections, creation of producer strains | Comparative metagenomics of decaying wood reveals bacterial platforms and genes for lignin conversion | Sukhanov Artemiy Yurievich | Sukhanov A.Y.1, Kungurov G.A.1, Valiakhmetov E.E.1, Trahtman N.V.1, Validov S.Z.1 | 1 FRC "Kazan Research Center" RAS, Russia |
| [Sym 09] 2. Biotechnology through the lens of the microbiome | Antidepressant effect of Levilactobacillus brevis strain 47f on an animal model of depression and patients with comorbid depres-sion | Averina Olga | Averina O.V.1, Zorkina Ya.A.2, Varaeva Y.R.3, Kovtun A.S.1, Abramova O.V.2, Starodubova A.V. 3, Danilenko V.N. 1, Chekhonin V.P. 2 | 1 Institute of General Genetics of the Russian Academy of Sciences, Moscow, Russia; 2 FSBI "V.P. Serbsky National Research Medical Center of Psychiatry and Narcology" of the Ministry of Health. Moscow, Russia; 3 Clinic of therapeutic Nutrition of the Federal State Budgetary Institution "FITZ Nutrition and Bio-technology", Moscow, Russia |
| [Sym 09] 2. Biotechnology through the lens of the microbiome | An algorithm for selecting a neurobiotic among Russian Bifidobacterium adolescentis strains using genomic analysis | Averina Olga | Averina O.V.1, Troshina D.A.1, Danilenko V.N.1 | 1 Institute of General Genetics of the Russian Academy of Sciences, Moscow, Russia |
| [Sym 10] 1. Molecular medicine: gene expression and human diseases | The use of virus-like particles for the delivery of ribonucleoprotein complexes based on CRISPR/Cas systems | Aliev Timur | Aliev T. 1,2, Prudnikova E. 1, Imatdinov I. 1 | 1 State Research Center of Virology and Biotechnology “Vector”, Koltsovo, Russia; 2 Novosibirsk State University, Novosibirsk, Russia |
| [Sym 10] 1. Molecular medicine: gene expression and human diseases | Patient cohort-based study of cancer metabolic reprogramming and anti-cancer treatment with traditional Chinese medicine | Chen Wen-Lian | Wen-Lian Chen1, Xin Jing1, Dan Liu1, Cai-Yi Yang1, Hong Liu1 | 1 Cancer Institute, Longhua Hospital, Shanghai University of Traditional Chinese Medicine, Shanghai 200032, China |
| [Sym 10] 1. Molecular medicine: gene expression and human diseases | Transcriptional effects of STAG2 duplication during early neurogenesis | Tubalova Maria Igorevna | Tubalova M.I.1,2, Koksharova G.S. 3, Gridina M.M.1,2,3, Costa S.4, Krepischi A.4, Fishman V.S. 1,2,3 | 1 Institute of Cytology and Genetics, SB RAS, Novosibirsk, Russia; 2 Novosibirsk State University, Novosibirsk, Russia; 3 Sirius University of Science and Technology, Sochi, Russia; 4 University of Sao-Paulo, Sao-Paulo, Brazil |
| [Sym 10] 1. Molecular medicine: gene expression and human diseases | Differentiation of mesenchymal stem cells from the Bichat’s fat pad into corneal keratocytes | Gaivoronskaya Anastasia | Gaivoronskaya A.A.1,2, Butikova E.A.1,2, Surovtseva M.A.1 | 1 Research Institute of Clinical and Experimental Lymphology - Branch of the Institute of Cytology and Genetics, SB RAS, Novosibirsk, Russia; 2 Novosibirsk State University, Novosibirsk, Russia |
| [Sym 10] 1. Molecular medicine: gene expression and human diseases | Competing Endogenous RNAs as Markers for the Detection of High-Grade Serous Ovarian Cancer | Loginov Vitaliy Igorevich | Utkina O.V.1, Burdennyy A.M.2,3, Loginov V.I.2, Pronina I.V.1 | 1 State University of Education, Faculty of Natural Sciences, Department of Physiology, Human Ecol-ogy and Biomedical Knowledge, 10A-2 Radio st., Basmanny mun. dist., Moscow, 105005, Russian Federation; 2 Institute of General Pathology and Pathophysiology, 8 Baltiyskaya str., Moscow, 125315, Russian Federation; 3 Emanuel Institute of Biochemical Physics, Russian Academy of Sciences, 4 Kosygina str., Moscow, 119334, Russian Federation |
| [Sym 10] 1. Molecular medicine: gene expression and human diseases | An isogenic cell platform based on patient-specific iPSC-derived dopaminergic neurons to study the LGR4: c.1087G>T genetic variant | Sorogina Diana | Sorogina D.A.1, Podvysotskaya V.S.1, Pavlova S.V.1, Medvedev S.P.1, Zakian S.M.1, Grigor’eva E.V.1 | 1 Institute of Cytology and Genetics, SB RAS, Novosibirsk, Russia |
| [Sym 10] 1. Molecular medicine: gene expression and human diseases | Analysis of SIX3 Allelic Expression in Isogenic Human iPSC Lines Carrying a SIX2 Gene Deletion | Tarkhova Anna | Tarkhova A.1,2, Khabarova А.1, Fishman V.1,3, Salnikov P.1,2, Koksharova G.3 | 1 Institute of cytology and genetics SB RAS, Novosibirsk, Russia; 2 Novosibirsk state university, Novosibirsk, Russia; 3 Sirius University of Science and Technology, Sochi, Russia |
| [Sym 10] 1. Molecular medicine: gene expression and human diseases | Bioinformatic construction of lncRNA-microRNA-mRNA axes involved in ferroptosis regulation in lung adenocarcinoma | Selezneva Alena | Selezneva Al.D.1, Selezneva An.D.1, Burdennyy A.M.1,2, Loginov V.I.1,3, Braga E.A.1,3 | 1 Institute of General Pathology and Pathophysiology, Moscow, Russia; 2 Emanuel Institute for Biochemical Physics, Moscow, Russia; 3 Bochkov Research Centre for Medical Genetics, Moscow, Russia |
| [Sym 10] 1. Molecular medicine: gene expression and human diseases | Transcriptome of T-Regulatory Cells in T1D: The Role of BACH2 in Maintaining Immune Tolerance | Tychinin Dmitry | Tychinin D.I. 1, Kobyzeva P.A. 1, Vladimirov I.S.1, Mukhin V.E. 1, Svetlichny D.V. 1 | 1 Center for Strategic Planning and Management of Biomedical Health Risks, Federal Medical and Biological Agency. Pogodinskaya St. 10, bldg. 1, Moscow, 119121, Russia |
| [Sym 10] 1. Molecular medicine: gene expression and human diseases | Transcriptome analysis of M1-like macrophages in patients with familial hypercholesterolemia | Izyumchenko Artem Dmitrievich | Izyumchenko A.D.1,2, Tanayants K.O.2, Dracheva K.V.1, Legostaeva K.V.1, Grunina M.N.1,2, Suchko P.A.3, Glotov O.S.3, Larionova E.E.4, Urazgildeeva S.A.5, Kulikov A.N.1, Usenko T.S.1,2, Pchelina S.N.1,2, Miroshnikova V.V.1,2 | 1 Pavlov First Saint-Petersburg State Medical University, St. Petersburg, Russia; 2 Petersburg Nuclear Physics Institute named by B.P.Konstantinov of National Research Centre «Kur-chatov Institute», Gatchina, Russia; 3 Center of Genomic Technologies "Cerbalab", St. Petersburg, Russia; 4 Institute of Experimental Medicine, Saint Petersburg, Russia; 5 St. Petersburg Medical and Social Institute, St. Petersburg, Russia |
| [Sym 10] 1. Molecular medicine: gene expression and human diseases | Study of the effect of erythropoietin-encoding mRNA on the development of anemia induced by cytostatic therapy | Dyagileva Anastasia | Dyagileva A.1, Rybalkina O.2, Chernyaev I.1,2, Kisakov D.3, Kisakova L.3, Sharabin S.3, Krasnikova S.3 | 1 Tomsk State University, Tomsk, Russia; 2 E.D. Goldberg Research Institute of Pharmacology and Regenerative Medicine, Tomsk National Research Medical Center of the Russian Academy of Sciences, Tomsk, Russia; 3 Federal Budgetary Research Institution State Research Center of Virology and Biotechnology "Vec-tor" of Rospotrebnadzor, Koltsovo, Novosibirsk Region, Russia |
| [Sym 10] 1. Molecular medicine: gene expression and human diseases | Features of Monoallelic Regulation of Gene Expression in Human Embryo Chorionic Villi | Shevtsov Daniil | Shevtsov D.G.1, Lushnikov I.V.1, Zhilkina M.A.1, Tolmacheva E.N.1, Vasilyev S.A.1 | 1 Research Institute of Medical Genetics, Tomsk National Research Medical Center of the Russian Academy of Sciences (TNRMC), Tomsk, Russia |
| [Sym 10] 1. Molecular medicine: gene expression and human diseases | Construction of a ceRNA network potentially involved in the regulation of DNA methylation and demethylation processes in clear cell renal cell carcinoma using bioinformatics tools | Selezneva Anna | Selezneva An.D.1, Selezneva Al.D.1, Loginov V.I.1,2, Burdennyy A.M.1,3, Braga E.A.1,2 | 1 Institute of General Pathology and Pathophysiology, Moscow, Russia; 2 Bochkov Research Centre for Medical Genetics, Moscow, Russia; 3 Emanuel Institute for Biochemical Physics, Moscow, Russia |
| [Sym 10] 1. Molecular medicine: gene expression and human diseases | Generality and specificity of the decidual cell transcriptome in preeclampsia in Russian populations | Babovskaya Ananstasia | Babovskaya A.A.1, Trifonova E.A.1, Stepanov V.A.1 | 1 Research Institute of Medical Genetics, Tomsk National Research Medical Center, Tomsk, 634050 Russia |
| [Sym 10] 1. Molecular medicine: gene expression and human diseases | Mechanistic study of TUDCA promoting metastasis of esophageal squamous cell carcinoma by activating the “NR2C2-ITGB6-Focal adhesion” cascade | Yang CaiYi | Cai-Yi Yang1, Wen-Lian Chen1 | 1 Cancer Institute, Longhua Hospital, Shanghai University of Traditional Chinese Medicine, Shanghai 200032, China |
| [Sym 10] 1. Molecular medicine: gene expression and human diseases | The impact of acidosis and xenobiotics on nuclear speckles and alternative splicing in oncogenesis | Rubtsov Pavel Valentinovich | Rubtsov P.1, Pavlova I.1, Arapidi G.1, Kazakova A.1, Bogomyakova M.1, Varizhuk A.1 | 1 Lopukhin FRCC PCM, Moscow, Russia |
| [Sym 10] 1. Molecular medicine: gene expression and human diseases | Detection of Copy Number Alteration and Loss of Heterozygosity in Rare TERT-Negative Endocrine Tumors | Makarikova Olga | Makarikova O.1, Luppov D.1,2,3, Simonov A.3, Suntsova M.1, Matrosova A.1, Buzdin A.1,2,3 | 1 Sechenov First Moscow State Medical University, Moscow, Russia; 2 Burnasyan Federal Medical Biophysical Center, Federal Medical-Biological Agency of Russia, Mos-cow, Russia; 3 Sirius University of Science and Technology, 1 Olimpiyskiy Ave, 354340, Sirius, Krasnodar region, Russia |
| [Sym 10] 1. Molecular medicine: gene expression and human diseases | Aminoglycoside application for stimulating readthrough of premature termination codon in treatment of a rare genetic disease Kindler Syndrome | Martynova Aleksandra | Martynova A.1, Isaeva T.1, Kosykh A.1, Gurskaya N.1 | 1 Pirogov Russian National Research Medical University, Ministry of Health, Department of Regenera-tive Medicine, Research Institute of Translational Medicine, Moscow, Russia |
| [Sym 10] 1. Molecular medicine: gene expression and human diseases | Comprehensive Bioinformatic Analysis of Cisplatin-Induced Processes in Tumor Cells | Bekbaeva Irina | Bekbaeva I.V.1,2, Shnaider P.V.1, Provolovitch S.O.1,3, Ivanova O.M.1, Manukyan A.A.1, Shender V.O.1,4, Arapidi G.P.1,2,4 | 1 Lopukhin Federal Research and Clinical Center of Physical-Chemical Medicine of Federal medical biological agency, Moscow, Russia; 2 Moscow Institute of Physics and Technology, Dolgoprudny, Russia; 3 Lomonosov Moscow State University, Moscow, Russia; 4 Shemyakin-Ovchinnikov Institute of Bioorganic Chemistry, RAS, Moscow, Russia |
| [Sym 10] 1. Molecular medicine: gene expression and human diseases | Identification of molecular markers characteristic of a poorly differentiated class of hepatocellular carcinoma | Lukina-Gronskaya Aleksandra | Lukina-Gronskaya A.1, Domnina D.1,2, Kaluzhsky I.3, Kustova I.1, Gorev A.1, Dya-kova N.1, Ozerova D.1, Kudashkin N.1, Makeev V.3, Lazarevich N.1,2 | 1 Research Institute of Experimental Oncology and Carcinogenesis, N.N. Blokhin National Medical Research Center of Oncology; 2 Biological Department, Lomonosov Moscow State University, Moscow, Russia; 3 Vavilov Institute of General Genetics Russian Academy of Science, Moscow, Russia |
| [Sym 10] 1. Molecular medicine: gene expression and human diseases | Characterizing cancer-associated fibroblast composition and spatial organization of the stromal microenvironment in ovarian cancer as a basis for identifying targets for small-molecule drugs | Kazakova Anastasia Nikolaevna | Kazakova A.N.1,2,3, Anufrieva K.S1, Shnaider P.V.1, Ivanova O.M.1, Shender V.O.1,4, Arapidi G.P.1,3,4 | 1 Lopukhin Federal Research and Clinical Center of Physical-Chemical Medicine of Federal Medical Biological Agency, Moscow, Russia; 2 Center for Precision Genome Editing and Genetic Technologies for Biomedicine, Lopukhin Federal Research and Clinical Center of Physical-Chemical Medicine of Federal Medical Biological Agency, Moscow, Russia; 3 Moscow Institute of Physics and Technology (National Research University), Dolgoprudny, Russia; 4 Shemyakin-Ovchinnikov Institute of Bioorganic Chemistry, RAS, Moscow, Russia |
| [Sym 10] 1. Molecular medicine: gene expression and human diseases | Identification of potential protein markers of affective disorders using proteomics methods and assessment of their prognostic significance | Smirnova Liudmila Pavlovna | Smirnova L.1, Seregin A.1, Zavyalova M.2, Kazantseva D.1, Brzhozovsky A.2, Burenkova M.1, Ivanova S.1 | 1 Tomsk Research Institute of Mental Health, Tomsk National Research Medical Center, Tomsk, Russia; 2 Skolkovo Institute of Science and Technology, Moscow, Russia |
| [Sym 10] 1. Molecular medicine: gene expression and human diseases | Transcriptional and Epigenetic Changes in Type 1 Diabetes Progression | Svetlichnyy Dmitry | Tychinin D.I. 1, Telnaya E.A. 1, Antonova O.A. 1, Petryakina E.S. 1, Svetlichnyy D.V.1 | 1 Center for Strategic Planning and Management of Biomedical Health Risks, Federal Medical and Biological Agency. |
| [Sym 10] 2. Molecular medicine: gene expression and human diseases | Manganese-modified sorbent: in vitro study of its effect on blood leukocytes | Ovchinnikov Viktor S | Ovchinnikov V.S., Rachkovskaya L.N., Shvetsova A.M., Korolev M.A., Letyagin A.Yu. | Institute of Clinical and Experimental Lymphology - Branch of the Institute of Cytology and Genetics, SB RAS, Novosibirsk, Russia |
| [Sym 10] 2. Molecular pathology, diagnostics, and therapy | Toxicological characteristics of radiation-pegylated hyaluronidase | Shvetsova Aleksandra | Shvetsova A.1,3*, Korolev M.1, Churin A.3, Ershov K.1,2, Madonov P.1,2 | 1 NIIKEL, a branch of the Institute of Cytology and Genetics, SB RAS, Novosibirsk, Russia; 2 NGMU, Novosibirsk, Russia; 3 E.D. Goldberg Research Institute of Pharmacology and Regenerative Medicine of the Tomsk National Research Medical Center of the Russian Academy of Sciences, Tomsk, Russia |
| [Sym 10] 2. Molecular pathology, diagnostics, and therapy | Mass spectrometric comparison of the efficacy of a commercial foreign sorbent and a Russian sorbent in removing albumin and IgG from human serum. | Smirnova Liudmila Pavlovna | Smirnova L.1*, Boksha I.2,3, Zavyalova M.4, Seregin A.1, Konstantinova S.2, Nikitin K.2, Gromova M.2, Konovalova A.5, Lunin V.2 | 1 Tomsk, Russia; 2 Gamaleya National Research Center of Epidemiology and Microbiology, Moscow, Russia; 3 Mental Health Research Centre, Moscow, Russia; 4 Skolkovo Institute of Science and Technology, Moscow, Russia; 5 Siberian State Medical University of the Ministry of Health of the Russian Federation, Tomsk, Russia, 634050 |
| [Sym 10] 2. Molecular pathology, diagnostics, and therapy | Impact of the marine cyanobacteria Leptolyngbya cf. ectocarpi on somatic cell function in mice suffering from inflammatory bowel disease and toxic hepatitis | Lykov Alexander Petrovich | Lykov A.1, Uvarov I.1, Dolgalev E.1 | 1 Research Institute of Clinical and Experimental Lymphology - Branch of Institute of Cytology and Genetics, Siberian Branch of Russian Academy of Sciences, Novosibirsk, Russia |
| [Sym 10] 2. Molecular pathology, diagnostics, and therapy | Composition of the intestinal microbiota of female Wistar rats with experimental breast cancer and different therapeutic methods | Cherkas Valeriya Nikolaevna | Poveshchenko A.1, Cherkas V.1, Kabakov A.1, Kazakov O.1, Shipova A.2, Kon-dratyuk E.1, Bodrova N.1, Vasiliev G.2 | 1 SICEL - branch of Federal Research Center Institute of Cytology and Genetics SD RAS, Novosibirsk, Russia; 2 Institute of Cytology and Genetics of SB RAS, 630090, Novosibirsk, Novosibirsk, Russia |
| [Sym 10] 2. Molecular pathology, diagnostics, and therapy | Impact of the marine cyanobacteria Leptolyngbya cf. ectocarpi on somatic cell function in mice suffering from inflammatory bowel disease and toxic hepatitis | Uvarov Ivan Pavlovich | Uvarov I.P.1, Lykov A.P.1 | 1 Research Institute of Clinical and Experimental Lymphology - Branch of Institute of Cytology and Genetics, Siberian Branch of Russian Academy of Sciences, Novosibirsk, Russia |
| [Sym 10] 2. Molecular pathology, diagnostics, and therapy | Quantity of pro-oncogenic miRNAs and tumor-suppressive miRNAs in lymph in experimental breast cancer | Kabakov Aleksey Vasilievich | Kabakov A.1, Kazakov O.1, Poveshchenko A.1, Cherkas V.1, Kononchuk V.1, Kalinina T.1, Bodrova N.1, Sultanova L.1 | 1 SICEL - branch of Federal Research Center Institute of Cytology and Genetics SD RAS, Novosibirsk, Russia |
| [Sym 10] 2. Molecular pathology, diagnostics, and therapy | Functional state of mesenchymal stem cells from Bish's fat pads on nitinol mesh implants | Bondarenko Natalia | Bondarenko N.1, Baidina V.1, Surovtseva M.1, Kim I.1, Ostapets S.2, Naumov A.3, Baigonakova G.4, Marchenko E.4, Poveshchenko O.1 | 1 RICEL - branch of the Institute of Cytology and Genetics SB RAS, Novosibirsk, Russia; 2 NGMU, Novosibirsk, Russia; 3 Novosibirsk Regional Clinical Hospital, Novosibirsk, Russia; 4 National Research Tomsk State University, Tomsk, Russia |
| [Sym 10] 2. Molecular pathology, diagnostics, and therapy | The influence of photodynamic therapy and a combination of photodynamic therapy and surgical treatment of breast cancer on the relationship between pro-oncogenic and anti-oncogenic microRNAs in the thymus with thymus structure | Kazakov Oleg Vasilievich | Kazakov O.1, Kabakov A.1, Poveshchenko A.1, Cherkas V.1, Bodrova N.1, Sultanova L.1 | 1 SICEL - branch of Federal Research Center Institute of Cytology and Genetics SD RAS, Novosibirsk, Russia |
| [Sym 10] 2. Molecular pathology, diagnostics, and therapy | Changes Ki-67 after chemotherapy for experimental breast cancer | Bodrova Natalia Romanovna | Bodrova N.1, Kabakov A.1, Poveschenko A.1, Kazakov O.1, Cherkas V.1 | 1 SICEL - branch of Federal Research Center Institute of Cytology and Genetics SD RAS, Novosibirsk, Russia |
| [Sym 10] 2. Molecular pathology, diagnostics, and therapy | Concentration and safety of freely circulating DNA in acute myeloid leukemia | Voropaeva Elena | Voropaeva E.1,2, Kuznetsova I.3, Orlov P.1, Minnikh S.1, Nesterets A.1, Maximov V.2,4, Pospelova T.2 | 1 Institute of Cytology and Genetics, SB RAS, Novosibirsk, Russia; 2 Novosibirsk State Medical University, Novosibirsk, Russia; 3 Research Institute of Internal and Preventive Medicine - Branch of the Institute of Cytology and Genetics, SB RAS, Novosibirsk, Russia; 4 Municipal Clinical Hospital No. 2, Novosibirsk, Russia |
| [Sym 10] 2. Molecular pathology, diagnostics, and therapy | Fibroblast like synoviocytes as a basis of an in vitro model for primary screening of targeted therapy in rheumatoid arthritis | Rippinen Daria Vladimirovna | Rippinen D.1, Solovieva A.1 | 1 Research Institute of Clinical and Experimental Lymphology - Branch of the ICG SB RAS, Novosi-birsk, Russia |
| [Sym 10] 2. Molecular pathology, diagnostics, and therapy | Reconstruction and analysis of the rheumatoid arthritis gene network and search for new targets for pharmacological therapy | Kleshchev Maxim A. | Kleshchev M.1,2, Yatsyk I.1,2, Volyanskaya A.1, Adamovskaya A.1, Antropova E.1, Demenkov P.1,2,3, Ivanisenko T.1, Ivanisenko V.1,2,3 | 1 Institute of Cytology and Genetics of the Siberian Branch of the Russian Academy of Sciences, Novosibirsk, Russia; 2 Kurchatov Genome Center of the Institute of Cytology and Genetics of the Siberian Branch of the Russian Academy of Sciences, Novosibirsk, Russia; 3 Novosibirsk State University, Novosibirsk, Russia |
| [Sym 10] 2. Molecular pathology, diagnostics, and therapy | Anti-invasive action of an aryltriazole derivative of betulic acid in glioblastoma cell lines | Usenov Kubanych | Usenov K.1, Cherezis S.V.1, Pokrovsky A.G.1, Semenova M.D.2, Popov S.A.2, Shulz E.E.2. | 1 Laboratory of Molecular Pathology IMMT, Novosibirsk State University, Novosibirsk, Russia; 2 N.N.Vorozhtsov Institute of Organic Chemistry SB RAS, Novosibirsk, Russia |
| [Sym 10] 2. Molecular pathology, diagnostics, and therapy | Bioinformatic pipeline for clinical annotation of small genetic variants | Pletenev Ilya Andreevich | Pletenev I.A.1, Malygina A.V.1, Grammatikati K.S.1, Pilipenko M.N.1, Sukhikh N.A.1, Mitrofanov S.I.1 | 1 Federal State Budgetary Institution «Centre for Strategic Planning and Management of Biomedical Health Risks» of the Federal medical and biological agency |
| [Sym 10] 2. Molecular pathology, diagnostics, and therapy | Evaluation of Genome Editing Outcomes: From CRISPResso2 Automation to Statistical Correction of Background Variants | Volodina Olga | Volodina O.V.1, Smirnikhina S.A. 1 | 1 Research Centre for Medical Genetics, Moscow, Russia |
| [Sym 10] 2. Molecular pathology, diagnostics, and therapy | Preclinical models of rheumatological diseases | Shishaeva Ulya | Shishaeva U.1, Belovezhets T.1 | 1 Research Institute of Clinical and Experimental Lymрhology - Branch of the Institute of Cytology and Genetics of the SB RAS, 630117, Novosibirsk, Russian Federation |
| [Sym 10] 2. Molecular pathology, diagnostics, and therapy | Synthesis and evaluation of furanocarbonyl-tethered diaryl-pyrazolo-cyclohexadienones as anticancer compounds: In vitro selective cytotoxicity, induction of apoptosis and gene expression | Hamad Mohammad Saleh | Hamad M.S.1, Mironov M.E.1,2, Pokrovsky M.A.2, Ananyeva D.I.1,2, Pokrovsky A.G.1, Shults E.E.2 | 1 Novosibirsk State University, Novosibirsk, Russia; 2 N.N. Vorozhtsov Institute of Organic Chemistry SB RAS, Novosibirsk, Russia |
| [Sym 10] 2. Molecular pathology, diagnostics, and therapy | Levels of lipopolysaccharide (LPS), lipopolysaccharide-binding protein (LBP) and high-mobility group B1 protein (HMGB1) in the blood serum of patients with alcohol dependence at different stages of the disease. | Epimakhova Elena | Епимахова Е.1, Ветлугина Т.1, Прокопьева В.1, Кисель Н.И.1, Бохан Н.1 | 1 Mental Health Research Institute, Tomsk National Research Medical Center, Russian Academy of Sciences, Aleutskaya Street 4, 634014, Tomsk, Russia, |
| [Sym 10] 2. Molecular pathology, diagnostics, and therapy | Analysis of proteome alterations associated with Alzheimer's disease in the brain of 5xFAD mice | Strelnikova Polina | Strelnikova P.A. 1,2, Indeykina M.I.1,2, Bugrova A.E.1,2, Zakharova N.V. 1,2, Kononikhin A.S. 1, Тikolaev E.N.1 | 1 Skolkovo Institute of Science and Technology, Moscow, Russia; 2 Emanuel Institute of Biochemical Physics RAS, Moscow, Russia |
| [Sym 10] 2. Molecular pathology, diagnostics, and therapy | Soy lecithin intake dose-dependent effects on mitochondrial structure and function in C57BL/6 laboratory mice brain cells | Popova Elizaveta | Popova E.1, Suldina L.1,2, Morozova K. 2, Kiseleva E. 2, Evtushenko A.1, Boldyreva L.1 | 1 Scientific Research Institute of Neurosciences and Medicine, Novosibirsk, Russia; 2 Institute of Cytology and Genetics SB RAS, Novosibirsk, Russia |
| [Sym 10] 2. Molecular pathology, diagnostics, and therapy | Accumulation of bedaquiline resistance mutations in Mycobacterium tuberculosis during long-term treatment of multidrug-resistant tuberculosis | Sergeev Grigorii | Sergeev G.M.1, Vyazovaya A.A.1, Ahmedova G.M.2, Maslennikova N.B.2, Korneev D.D.2, Polev D.E.1, Leontev D.S.2, Turkin E.N.2, Mokrousov I.V. 1 | 1 St. Petersburg Pasteur Institute, St. Petersburg, Russia; 2 Anti-Tuberculosis Dispensary of the Kaliningrad Region, Kaliningrad, Russia |
| [Sym 10] 2. Molecular pathology, diagnostics, and therapy | Combinations of BET inhibitors with G4 ligands for the treatment of hematological malignancies: rationale for a synergistic approach and mechanisms of action | Sapozhnikova Varvara | Sapozhnikova V. 1, Pavlova I. 1, Bogomyakova M. 1, Tikhomirov A. 2, Varizhuk A. 1 | 1 Lopukhin Federal Research Center for Physiological Chemistry and Pharmacology, Federal Medical Biological Agency of Russia, Moscow, Russia; 2 G.F. Gause Scientific-Research Institute of New Antibiotics, Moscow, Russia |
| [Sym 10] 2. Molecular pathology, diagnostics, and therapy | Effect of a combination of the antitumor antibiotic doxorubicin and a fullerene C60 adduct with glycine on the Hela oncological cell line | Meger Yakov Vasilievich | Rashenkova I.I.1, Degtar I.V.1, Meger Y.V.1, Sharoiko V.V.2, Semenov K.N.2, Lantusheko A.O.1*, Evstigneev M.P.1 | 1 Sevastopol State University, Sevastopol, Russia; 2 Pavlov First Saint Petersburg State Medical University, Saint Petersburg, Russia, |
| [Sym 10] 2. Molecular pathology, diagnostics, and therapy | The effect of the cyanobacteria Leptolyngbya cf. ectocarpi on the severity of inflammatory bowel disease in mice. | Dolgalev Evgenii | Dolgalev E.1, Lykov A.1 | 1 Research Institute of Clinical and Experimental Lymphology - Branch of the Insti-tute of Cytology and Genetics SB RAS, Novosibirsk, Russia |
| [Sym 10] 2. Molecular pathology, diagnostics, and therapy | Investigation of the binding of a pH-dependent aptamer to the nucleolin of tumor cells using confocal fluorescence microscopy | Meger Yakov Vasilievich | Meger Y.V.1, Rashenkova I.I.1, Gabrysenok1,2,Sokolov P.A.1,2, Lantusheko А.О.1* | 1 Sevastopol State University, Sevastopol, Russia; 2 St. Petersburg State University, St Petersburg, Russia |
| [Sym 10] 2. Molecular pathology, diagnostics, and therapy | Reorganization of the membrane lipid profile by NT-1505: therapeutic potential in the treatment of Alzheimer's type dementia | Gerasimov Nikolay | Gerasimov N.Yu.1, Nevrova O.V.1, Krivandin A.V.1, Goloshchapov A.N.1 | 1 N.M. Emmanuel Institute of Biochemical Physics of the Russian Academy of Sciences, 4 Kosygina Street, Moscow, 119334, Russia |
| [Sym 10] 2. Molecular pathology, diagnostics, and therapy | Systemic Reprogramming of Colorectal Adenocarcinoma Cells by miRNA-Targeting Mesyl Oligonucleotides | Miroshnichenko Svetlana Konstantinovna | Miroshnichenko S.1, Patutina O.1, Kupryushkin M.1, Markov A.1, Zenkova M.1 | 1 Institute of Chemical Biology and Fundamental Medicine SB RAS, Novosibirsk, Russia |
| [Sym 10] 3. Interstitial space and extravascular drainage/transport pathways | Chloroquine Modulates AQP4 Expression and Glymphatic Function in Melanoma B16 | Obanina Natalia Andreevna | Obanina N.1, Bgatova N.1 | 1 Research Institute of Clinical and Experimental Lymphology - Branch of the Institute of Cytology and Genetics, SB RAS, Novosibirsk, Russia |
| [Sym 11] Cognitive science, neurogenetics, neuroinformatics, and systems computational biology | Algebraic grammar of bioinformatics and the evolutionary paradigm of algebraic-operator Darwinism | Petoukhov Sergey Valentinovich | Petoukhov S.V. | Mechanical Engineering Research Institute by A.A. Blagonravov name, RAS, Moscow |
| [Sym 11] Cognitive science, neurogenetics, neuroinformatics, and systems computational biology | Region-specific annotation of scRNA-seq of hypothalamic neurons based on open-source spatial transcriptomics data | Starinnov Zakhar Ruslanovich | Starinnov Z.1*, Sabirov M.2, Chikina E.3, Romanov R.4 | 1 Koltzov Institute of Developmental Biology of the Russian Academy of Sciences, Moscow; 2 Koltzov Institute of Developmental Biology of the Russian Academy of Sciences, Moscow; 3 Koltzov Institute of Developmental Biology of the Russian Academy of Sciences, Moscow; 4 Department of Molecular Neurosciences, Center for Brain Research, Medical University of Vienna, Vienna, Austria |
| [Sym 12] 1. Processes of maintaining genome stability and reproduction of genetic information | Study of the enzymatic properties of natural polymorphic variants of human alkyladenine DNA glycosylase AAG | Kladova Olga | Kladova O.1*, Bakman A.1, Tyugashev T.1, Kuznetsova A.1 | 1 Institute of Chemical Biology and Fundamental Medicine, SB RAS, Novosibirsk, Russia |
| [Sym 12] 1. Processes of maintaining genome stability and reproduction of genetic information | The effect of SNP-associated amino acid substitutions in ABH2 enzyme on its properties and catalytic activity towards methylated DNA | Sagalakova Viktoriia | Sagalakova V.V.1*, Kolesnikova V.A., Davletgildeeva A.T.1, Kuznetsov N.A.1 | 1 Institute of Chemical Biology and Fundamental Medicine, SB RAS, Novosibirsk, Russia |
| [Sym 12] 1. Processes of maintaining genome stability and reproduction of genetic information | Development of a test system to reveal the most promising G-quadruplex stabilizers contributing to the adaptation of bacterial cells to external conditions | Monakhova Mayya | Iakushkina I.1, Nikiforova L.2, Ivanov I.2, Kubareva E.1, Monakhova M.1* | 1 Belozersky Institute of Physico-Chemical Biology, Lomonosov Moscow State University, Moscow, Russia; 2 Faculty of Chemistry, Lomonosov Moscow State University, Moscow, Russia |
| [Sym 12] 1. Processes of maintaining genome stability and reproduction of genetic information | Search and Functional Analysis of RT-like DNA Polymerases from Prokaryotic Antiphage Defense System | Semikina Anastasiya | Semikina A.D.1*, Kuznetsov N.A.1 | 1 Institute of Chemical Biology and Fundamental Medicine, SB RAS, Novosibirsk, Russia |
| [Sym 12] 1. Processes of maintaining genome stability and reproduction of genetic information | The role of the mismatch-specific endonuclease EndoMS in the processes of base excision repair and DNA mismatch repair | Miroshnikov Aleksandr | Miroshnikov A.A.1*, Kuznetsova A.A.1, Kuznetsov N.A.1 | 1 Institute of Chemical Biology and Fundamental Medicine, SB RAS, Novosibirsk, Russia |
| [Sym 12] 1. Processes of maintaining genome stability and reproduction of genetic information | Search and characterization of properties of terminal deoxynucleotidyltransferases XByss and XGal | Demyanenko Kirill Vladislavovich | Demianenko K.V.*, Mikushina E.S., Tyugashev T.E., Senchurova S.I., Kuznetsov N.A. | Institute of Chemical Biology and Fundamental Medicine, SB RAS, Novosibirsk, Russia |
| [Sym 12] 1. Processes of maintaining genome stability and reproduction of genetic information | Kinetic properties and substrate specificity of AP endonuclease 1 from Hypsibius exemplaris | Yakovleva Anastasia | Yakovleva A.*, Mikushina E., Kuznetsova A. | 1 Institute of Chemical Biology and Fundamental Medicine, SB RAS, Novosibirsk, Russia |
| [Sym 12] 1. Processes of maintaining genome stability and reproduction of genetic information | Regulation of DNA polymerase β-catalyzed repair synthesis in the nucleosome linker DNA | Shtanov Danil | Shtanov D.1*, Kurgina T.1, Kutuzov M.1, Moor N.1, Lavrik O.1 | 1 Institute of Chemical Biology and Fundamental Medicine, SB RAS, Novosibirsk, Russia |
| [Sym 12] 1. Processes of maintaining genome stability and reproduction of genetic information | Kinetic features of RNA polymerase, DNA polymerase, and RNase H1 actions during head-on transcription-replication conflict | Timofeyeva Nadezhda | Timofeyeva N.A.*, Kosarev Iu. A., Kuznetsova A.A., Kuznetsov N.A. | Institute of Chemical Biology and Fundamental Medicine, SB RAS, Novosibirsk, Russia |
| [Sym 12] 1. Processes of maintaining genome stability and reproduction of genetic information | Investigating the Influence of RNA-Binding Proteins on the Activity of PARP1 and PARP2 in Complex with HPF1 | Berezhnev Egor Alexandrovich | Berezhnev E.A. *, Naumenko K.N., Lavrik O.I. | Institute of Chemical Biology and Fundamental Medicine, SB RAS, Novosibirsk, Russia |
| [Sym 12] 2. Apoptosis and other fundamental cellular processes regulating cell fate | The effect of conditioned media from MSCs obtained from bone marrow, limbus, and Bichat fat pads on the proliferative and migratory activity of induced and mature corneal myofibroblasts | Avdonina Sofia | Avdonina S.А.1,2*, Surovtseva M.A.1, Poveshchenko О.V.1 | 1 Research Institute of Clinical and Experimental Lymphology - branch of the Institute of Cytology and Genetics SB RAS, Novosibirsk, Russia; 2 Novosibirsk State Pedagogical University, Novosibirsk, Russia |
| [Sym 12] 2. Apoptosis and other fundamental cellular processes regulating cell fate | Investigation of programmed cell death in Drosophila melanogaster ovaries under GAGA transcription factor deficiency | Xu Zhihua | Xu Z.1, Karagodin D.A.2, Baricheva E.M.1,2 * | 1 Novosibirsk State University, Novosibirsk, Russia; 2 Institute of Cytology and Genetics, SB RAS, Novosibirsk, Russia |
| [Sym 12] 2. Apoptosis and other fundamental cellular processes regulating cell fate | Modification of antioxidant protection of plants under the influence of resveratrol and nitrogen oxide donor of the structure of pea seedlings mitochondrial membranes in norm | Nevrova Olga | Nevrova O.V., Gerasimov N.Yu.*, Zhigacheva I.V., Goloshchapov A.N. | N.M. Emmanuel Institute of Biochemical Physics of the Russian Academy of Sciences, 4 Kosygina Street, Moscow, 119334, Russia |
| [Sym 13] 1. Genetic determinants of aging and longevity | Age-related alterations in Parp1 expression in the hippocampus and prefrontal cortex of Wistar rats and senescence-accelerated OXYS rats | Leonidova Sofya Sergeevna | Leonidova S.1*, Muraleva N.A.2 | 1 Novosibirsk State University, Novosibirsk, Russia; 2 Institute of Cytology and Genetics SB RAS, Novosibirsk, Russia |
| [Sym 13] 1. Genetic determinants of aging and longevity | Changes in the level of nuclear membrane protein Lemd2 and nuclear morphology of neurons in the brain of senescence-accelerated OXYS rats | Devyatkin Vasiliy Aleksandrovich | Devyatkin V.1*, Muraleva N.1, Maksimova K.2, Stefanova N.1, Kolosova N.1 | 1 Institute of Cytology and Genetics, SB RAS, Novosibirsk, Russia; 2 Siberian State Medical University, Tomsk, Russia |
| [Sym 13] 2. Systemic mechanisms of aging as targets to extend healthspan | Melatonin in the prevention of perinatal-associated neurological abnormalities in OXYS rat models of Alzheimer's disease | Gordeeva Maria | Gordeeva M.1*, Sityaeva D.1,2, Kozlova T.2, Kutlimetova A.2, Kolosova N.2, Stefanova N.2 | 1 Novosibirsk State University, Novosibirsk, Russia; 2 Institute of Cytology and Genetics, SB RAS, Novosibirsk, Russia |
| [Sym 13] 2. Systemic mechanisms of aging as targets to extend healthspan | The effect of microplastics on the rate of brain aging: an experimental study | Monogova Anastasia | Monogova A.1*, Bagryanskaya E.2, Kolosova N.3, Stefanova N.3 | 1 Novosibirsk State University, Novosibirsk, Russia; 2 N.N. Vorozhtsov Novosibirsk Institute of Organic chemistry SB RAS, Novosibirsk, Russia; 3 Institute of Cytology and Genetics, SB RAS, Novosibirsk, Russia |
| [Sym 13] 2. Systemic mechanisms of aging as targets to extend healthspan | Features of neuroglial interactions during brain maturation and the development of Alzheimer's disease signs in OXYS rats - analysis of transcriptomic data | Khodunova-Zhukovskaia Ivana | Khodunova-Zhukovskaia I.1*, Stefanova N. 2 | 1 Novosibirsk State University, Novosibirsk, Russia; 2 Institute of Cytology and Genetics, SB RAS, Novosibirsk, Russia |
| [Sym 13] 3. Bioinformatics approaches to studying mechanisms of aging and identifying strategies to slow it | Cellular and molecular features of the immune system in Alzheimer's disease based on transcriptome analysis | Kabieva Shuana | Sh.Sh. Kabieva1*, A.M. Shaimardanov1, D.I. Tychinin1, D.V. Svetlichny1 | 1 Center for Strategic Planning and Management of Biomedical Health Risks, Federal Medical and Biological Agency. Pogodinskaya St. 10, bldg. 1, Moscow, 119121, Russia |
| [Sym 13] 3. Bioinformatics approaches to studying mechanisms of aging and identifying strategies to slow it | SIRT6 as a biomarker of aging: a meta-analysis of public transcriptomic data | Kashuk Ekaterina | Kashuk E.1*, Tarakanova A.1, Malygina A.1, Khrameeva E.1, Smirnov D.1 | 1 Center forBiomedical Technologies, Skolkovo Institute of Science and Technology, Moscow121205, Russia |
| [Sym 13] 3. Bioinformatics approaches to studying mechanisms of aging and identifying strategies to slow it | Revisiting the Role of SIRT6 as a Biomarker of Aging | Smirnov Dmitrii Nikolaevich | Kashuk E.1, Tarakanova A.1, Malygina A.1, Khrameeva E.1, Smirnov D.1,2* | 1 Center for Bio- and Medical Technologies, Skolkovo Institute of Science and Technology, Moscow, 121205, Russia; 2 Central University, Moscow, 123056, Russia |
