List of oral reports

SectionTitleSpeakerAuthorsAffiliation
[Sym 01] 1. Structural and functional organization of genomesRepeated W chromosome turnover in Lasiocampinae moths: evidence from chromosome-scale genome assembliesShipova AleksandraShipova A.A.1*, Ershov N.I.1,21 Institute of Cytology and Genetics, SB RAS, Novosibirsk, Russia; 2 Federal Territory Sirius, Sirius University of Science and Technology, Sochi, Russia
[Sym 01] 1. Structural and functional organization of genomesIci-HHV-6: phylogenetic structure and localization based on 100,000 genomesIvanova AleksandraIvanova A.O.¹, Zhuk A.S.¹ ², Kireeva O.¹, Meleshko D.A.¹ ³, Zaichenoka M.¹ ⁴, Pustoshilov D.¹, Klimuk E.I.¹, Severinov K.V.¹¹ Biotech Campus LLC, Moscow, Russia, ² Institute of Applied Computer Science, ITMO University, Saint Petersburg, Russia, ³ Advanced Engineering School, ITMO University, Saint Petersburg, Russia, ⁴ Moscow Institute of Physics and Technology (MIPT), Dolgoprudny, Russia
[Sym 01] 1. Structural and functional organization of genomesThe life cycle of an architectural RNA from its transcription to maturation into stable RNP aggregatesKrasikova AllaKrasikova A.1*, Kulikova T.1, Zlotina A.1, Fedorov A.11 Laboratory of Cell Nucleus Structure and Dynamics, Saint-Petersburg State University, Saint-Petersburg, Russia
[Sym 01] 1. Structural and functional organization of genomesAnalysis of prokaryotic DNA methylation based on Oxford Nanopore readsKonanov Dmitry NKonanov D.1*, Babenko V.2, Krivonos D.1, Ilina E.11 Research institute for System Biology and Medicine, Moscow, Russia; 2 FRCC of Physical-Chemical Medicine of FMBA, Moscow, Russia
[Sym 01] 1. Structural and functional organization of genomesDetailed analysis of the restriction-modification systems for Porphyromonas gingivalisKrivonos DanilKrivonos D.1,2,*, Chugunov A.1, Proskurin A.1, Akhmedzanova A.1, Arkhipova A.1, Kovalchuk S.1, Savinova T.1, Mikoelyan K.1, Vvedensky A.1, Konanov D.1, Lukina-Gronskaya A.1, Efremov R.1, Govorun V.1, Ilyina E.1, Revazova Z.1, Tsargasova M.1, Vybornaya E.1, Brizgalova V.1, Bobr I.1, Yanushevich O.11 Research Institute for Systems Biology and Medicine (RISBM), 18, Nauchniy Proezd, 117246 Moscow, Russia; 2 Moscow Center for Advanced Studies 20, Kulakova Str., Moscow, Russia.3 Federal State Budgetary Educational Institution of Higher Education “Russian University of Medicine”, Moscow, Russia
[Sym 01] 1. Structural and functional organization of genomesGenome reannotation of Microdochium nivale and analysis of intrapopulation diversity in this species at the whole-genome levelAntonova Maria IgorevnaAntonova M.1*, Gorshkov V.11 Kazan Institute of Biochemistry and Biophysics is a structural division of the Federal Research Center"Kazan Scientific Center of the Russian Academy of Sciences", Kazan, Russia
[Sym 01] 1. Structural and functional organization of genomesPolymorphism in at least 80 genes could be associated with an attenuation of the strain used as live veterinary brucellosis vaccineFeodorova Valentina A.Feodorova V.*, Lavrukhin M., Zaitsev S., Larionova O.Saratov State University of Genetics, Biotechnology and Engineering named after N.I. Vavilov, Saratov, Russia
[Sym 01] 1. Structural and functional organization of genomesPhylogenetic patterns of repetitive sequence composition and diversity in the genomes of air-breathing catfish (Clarias, Siluriformes)Lisachev Artem PavlovichLisachev A.P.1,2*, Panthum T.2, Singchat W.2, Prasanpan J.2,3, Griffin D.2,4, Matsuda Y.2, Srikulnath K.21 Institute of Cytology and Genetics, SB RAS, Novosibirsk, Russia; 2 Kasetsart University, Bangkok, Thailand3 Kalasin Fish Hatchery Farm (Betagro), Kalasin, Thailand4 University of Kent, Canterbury, UK
[Sym 01] 1. Structural and functional organization of genomesA pipeline for identifying domesticated transposable elementsGuseva IuliiaGuseva I.1,2*, Rezvykh A.1, Funikov S.11 Engelhardt Institute of Molecular Biology of Russian Academy of Sciences, Moscow, Russia; 2 Moscow Institute of Physics and Technology (National Research University), Moscow, Russia
[Sym 01] 1. Structural and functional organization of genomesThe largest microsporidian genomes and active transposons mark an early stage of genome reductionMikhail RaykoRayko M.1, *, Efeykin B.2, Frolova E.1, Kamyshatskaya O.1, Skobkina O.1,3, Miroliubov A.4, Tokarev Y5., Miroliubova T.2, Shklyar A.3, Aleoshin V.6,7, Nassonova E1,3.1 Laboratory of Cytology of Unicellular Organisms, Institute of Cytology RAS, 4 Tikhoretsky ave., 194064, St. Petersburg, Russia² Severtsov Institute of Ecology and Evolution, Russian Academy of Sciences, Laboratory of Systematicsand Evolution of Parasites, Moscow, Russia³ St. Petersburg University, St. Petersburg, Russia⁴ Zoological Institute, Russian Academy of Sciences, Laboratory for the Study of Parasitic Worms and Protists, St. Petersburg, Russia⁵ All-Russian Institute of Plant Protection, Laboratory of Insect Pathology and Biotechnology, St.Petersburg, Russia⁶ Kharkevich Institute for Information Transmission Problems, Russian Academy of Sciences, Moscow, Russia⁷ Lomonosov Moscow State University, Belozersky Institute of Physico-Chemical Biology, Moscow, Russia
[Sym 01] 1. Structural and functional organization of genomesComparative Analysis of Singular Diagonal Blocks in Linkage Disequilibrium Matrices Across Human, Cattle, and Maize GenomesKhvorykh GennadyKhvorykh G.* and Khrunin A.National Research Centre «Kurchatov Institute», Moscow, Russia
[Sym 01] 1. Structural and functional organization of genomesFrom genomics to chromatomics: how close are we to understanding how eukaryotic genomes function?Shaytan Alexey KonstantinovichShaytan A.K.1,2*1 Lomonosov Moscow State University, Moscow, Russia; 2 HSE University, Moscow, Russia
[Sym 01] 2. Regulatory genomicsStudying of the regulatory role and rational design of RNA polymerase II transcription terminators using classical machine learning methodsLetiagina Anna EvgenievnaLetiagina A.E.1*, Andreyeva E.N.1, Posazhennikov M.A.1,2, Omelina E.S.11 Institute of Molecular and Cellular Biology SB RAS, Novosibirsk, Russia; 2 Novosibirsk State University, Russia
[Sym 01] 2. Regulatory genomicsImprovement of a phylogenetic footprinting method for transcription factor binding sites recognition based on the use of bootstrap trials for the analysis of bacterial genomic dataMukhin Aleksey MaksimovichMukhin A.M.1,2,3*, Khlebodarova T.M.1,2, Oshchepkov D.Yu.1,21 Institute Cytology and Genetics SB RAS, Novosibirsk, Russia; 2 Kurchatov Genomic Center of ICG SB RAS, Novosibirsk, Russia; 3 Novosibirsk State University, Novosibirsk, Russia *
[Sym 01] 2. Regulatory genomicsGromosega tool for predicting transcription factor cooperativity in ChIP-seq and RNA-seq dataLevitsky Victor G.Levitsky V.G.1*, Tsukanov A.V.1, Raditsa, V.V11 Institute of Cytology and Genetics, SB RAS, Novosibirsk, Russia
[Sym 01] 2. Regulatory genomicsDifferential allele-specific analysis reveals empagliflozin-induced regulatory effects in human PBMCsGubina MariaGubina M.1,2*, Bryzgalov L.O.11 Institute of Cytology and Genetics, SB RAS, Novosibirsk, Russia; 2 Novosibirsk State University, Novosibirsk, Russia
[Sym 01] 2. Regulatory genomicsMulti-PseNet: A Integrated Deep Learning Framework for Pseudouridine Site Prediction by Multi-modal FeaturesZhao JianLiang Dong1, Jingjing Liu1, Haiqing Si2, Jing Wu3, Jiawen Jing1, Quan Wang1, Xiaofeng Song1*, Jian Zhao1*1 Department of Biomedical Engineering, Nanjing University of Aeronautics and Astronautics, Nanjing, China; 2 College of General Aviation and Flight, Nanjing University of Aeronautics and Astronautics, Nanjing, China; 3 School of Biomedical Engineering and Informatics, Nanjing Medical University, Nanjing, China
[Sym 01] 2. Regulatory genomicsMotif activity response analysis for identification of transcription factors driving oncogenic transformation and tumor subtype variabilityKropivnitskaya Nataliia VladimirovnaKropivnitskaya N.1, Kaluzhskiy I.2, Meshcheryakov G.3, Makeev V.4*1 Laboratory of Systems Biology and Computational Genetics, Vavilov Institute of General Genetics, Russian Academy of Sciences, Moscow, Russia; 2 Multiomics laboratory, Life Science Center MIPT, Moscow, Russia; 3 Institute of Protein Research, Russian Academy of Sciences, Pushchino, Russia; 4 Cancer Research UK, National Biomarker Centre, Manchester, UK5 N.N. Blokhin National Medical Research Center of Oncology, Moscow, Russia
[Sym 01] 2. Regulatory genomicsSearch for potential VDR/Partner composite elements in regulatory DNA of genes associated with respiratory infections and atopic diseasesPopov AlexeyPopov A.1*, Oshchepkov D.2, Kononchuk V.1, Kalinina T.1, Valembakhov T.1, Lukin A1,3, Kondyurina E.4, Zelenskaya V.4, Vavilin V.11 Federal Research Center of Fundamental and Translational Medicine, SB RAS, Novosibirsk, Russia; 2 Institute of Cytology and Genetics, SB RAS, Novosibirsk, Russia; 3 Novosibirsk State University, Novosibirsk, Russia; 4 Novosibirsk State Medical University, Novosibirsk, Russia
[Sym 01] 2. Regulatory genomicspLatinum-STARR: a new STARR-seq platform for functional characterization of regulatory sequencesSemicheva DariaSemicheva D.I.2*, Salnikov P.A.1, Panchenko D.D.2, Ivanova A.S.2, Makarenko M.S.2, Gridina M.M.1,2, Fishman V.S.1,21 The Institute of Cytology and Genetics SB RAS, Novosibirsk, Russia; 2 Sirius University of Science and Technology, Sirius Federal Territory, Russia
[Sym 01] 2. Regulatory genomicsClustering of transcription factors for different taxa of eukaryotes based on the similarity of their motifs and their binding sitesRaditsa VladimirVladimir V. Raditsa1*, Victor G. Levitsky1,21 Institute of Cytology and Genetics, SB RAS, Novosibirsk, Russia; 2 Novosibirsk State University, Novosibirsk, Russia
[Sym 01] 2. Regulatory genomicsMolecular mechanisms of tissue-specific transcription during Drosophila melanogaster metamorphosisEvdokimova Alexandra AlexeevnaEvdokimova A.¹*, Kolesnikova T.², Vorobyeva N.¹¹ Institute of Gene Biology, Russian Academy of Sciences, Moscow, Russia² Institute of Molecular and Cellular Biology, Novosibirsk, Russia
[Sym 01] 2. Regulatory genomicsPredicting gene expression profiles based on CAGE-seq data using a modified LegNet architectureAsadullin ArturAsadullin A.1*, Kolpakov F.1, Kolmykov S.11 Department of Computational Biology, Sirius University of Science and Technology, Sirius, Krasnodar region, Russia
[Sym 01] 2. Regulatory genomicsIdentification of pioneer transcription factors based on allele-specific differences in chromatin accessibilityKolmykov SemyonPanisheva S.A.1*, Levitsky V.G.1,2, Kolmykov S.K.31 Novosibirsk State University, Novosibirsk, Russia; 2 Institute of Cytology and Genetics, SB RAS, Novosibirsk, Russia; 3 Department of Computational Biology, Sirius University of Science and Technology, Sirius, Russia
[Sym 01] 2. Regulatory genomicsExploring the regulatory grammar of human UTRs with predictive and generative deep learning modelsAristova ElizavetaAristova E.O.1,2*, Khoroshkin M. 3, Rybakov A.K.1, Penzar D.D.2, Zinkevich A.O.1, Kulakovskiy I.V.2,41 Faculty of Bioengineering and Bioinformatics, Lomonosov Moscow State University, Moscow, Russia; 2 Vavilov Institute of General Genetics, RAS, Moscow, Russia; 3 University of California, San Francisco, CA, USA; 4 Institute of Protein Research, RAS, Pushchino, Russia
[Sym 01] 2. Regulatory genomicsStudy of the mechanism of post-transcriptional protein buffering in human skeletal musclePopov Daniil V.Popov D.1*, Makhnovskii P.1, Orlova M.11 Institute of Biomedical Problems of the RAS, Moscow, Russia
[Sym 01] 2. Regulatory genomicsUnraveling host-parasite communication: small non-coding RNA and exosomes from human trematodesPakharukova MariaPakharukova M.Y. 1,2*, Lishai E.A. 1,2, Fuks E. 2, Cheng G. 31 Institute of Cytology and Genetics, Siberian Branch of Russian Academy of Sciences, Novosibirsk, Russia; 2 Novosibirsk State University, Novosibirsk, Russia; 3 Shanghai Tenth People’s Hospital, Institute for Infectious Diseases and Vaccine Development, Tongji University School of Medicine, Shanghai, China
[Sym 01] 2. Regulatory genomicsRepresentation-independent comparison of transcription factor motifsTsukanov Anton VitalievichTsukanov A.V1,2*, Levitsky V.G.1,21 Institute of Cytology and Genetics, SB RAS, Novosibirsk, Russia; 2 Institute of Molecular and Cellular Biology, SB RAS, Novosibirsk, Russia
[Sym 01] 3. Fundamental and applied 3D genomicsTrimodal approach revealing the role of H3K36 mono- and dimethylation and the enzymes responsible for these processes in the spatial organisation of chromatinMityukov Vladislav DmitrievichMityukov V.D.1*, Ulyanov S.V.1,2, Razin S.V.1,21 Institute of Gene Biology RAS, Moscow, Russia; 2 Lomonosov Moscow State University, Faculty of Biology, Moscow, Russia
[Sym 01] 3. Fundamental and applied 3D genomicsCohesin contributes to nuclear stiffness and limits cell migrationKabirova EvelynKabirova E.1,2*, Maltseva E.3, Ryzhkova A.1, Khabarova A.1, Battulin N.1,21 Institute of Cytology and Genetics, Novosibirsk, Russia; 2 Novosibirsk State University, Novosibirsk, Russia; 3 Sirius University of Science and Technology, Sirius Federal Territory, Russia
[Sym 01] 3. Fundamental and applied 3D genomicsOncogenic NOTCH1 fusions: from Hi-C diagnostics to functional interpretationRaitsina YanaRaitsina Y.V.1,2*, Salnikov P.A.1,2, Gridina M.M.1,3, Fishman V.S.1,3, Torgunakov N.Yu.1,21 Institute of Cytology and Genetics, Siberian Branch of the Russian Academy of Sciences, Novosibirsk, Russia; 2 Novosibirsk State University, Novosibirsk, Russia; 3 Scientific and Technological University "Sirius", Sirius Federal Territory, Russia
[Sym 01] 3. Fundamental and applied 3D genomicsThe influence of spatial chromatin structure on local hopping of the Sleeping Beauty transposon in human HCT116 cellsBattulin NarimanKhabarova A.A.1, Nuriddinov M.M.1, Smirnov A.V.1, Battulin N.R.1,2*1 Institute of Cytology and Genetics, SB RAS, Novosibirsk, Russia; 2 Novosibirsk State University, Novosibirsk, Russia
[Sym 01] 3. Fundamental and applied 3D genomicsCondensins-mediated mitotic folding persists as a structural echo in interphase chromatinBattulin NarimanYunusova A.M.1,2, Tsoi E.A.1,2, Smirnov A.V.1, Shnaider T.A.1,2, Pristyazhnuk I.E.1,2, Gridina M.M.1,2, Fishman V.S.1,2, Battulin N.R.1,2*1 Institute of Cytology and Genetics, SB RAS, Novosibirsk, Russia; 2 Novosibirsk State University, Novosibirsk, Russia
[Sym 01] 3. Fundamental and applied 3D genomicsCoarse-grained modeling of polymer brush interactions in lampbrush chromosomes of Xenopus tropicalisKonstantinov Viktor VitalievichKonstantinov V.1,2*, Lagunov T.1,2Konstantinov V.1, 2*, Lagunov T.1, 2
[Sym 01] 3. Fundamental and applied 3D genomicsThe role of CTCF in the evolution of chromatin spatial organizationNurislamov ArtemNurislamov A.1,2*, Popov A. 3, Semichyova D. 1,2, Gridina M. 1,2, Fishman V. 1,21 Sirius University of Science and Technology, Sirius Federal Territory, Russia; 2 Institute of Cytology and Genetics, Novosibirsk, Russia; 3 Skolkovo Institute of Science and Technology, Moscow, Russia
[Sym 01] 3. Fundamental and applied 3D genomicsCombining DamID and Hi-C for Chromatin Interaction MappingSalnikov PavelNurislamov A.R.1, Stepanchuk Y.K.1,2,3, Tubalova M.I.2,3, Salnikov P.A.2,3*1 Sirius University of Science and Technology, Russia; 2 Новосибирский государственный университет, Новосибирск, Россия; 3 Институт цитологии и генетики СО РАН, Новосибирск, Россия
[Sym 01] 3. Fundamental and applied 3D genomicsComparative analysis of chromatin spatial contact maps in vertebrate lampbrush chromosomesLagunov TimofeyLagunov T.1,2, *, Gridina M.1,2,3, Stepanchuk Y.1,2,3, Konstantinov V.1,2, Kulikova T.4, Maslova A.4, Krasikova A.4, Fishman V.1,2,3,51 Institute of Cytology and Genetics SB RAS, Novosibirsk, Russia; 2 Novosibirsk State University, Novosibirsk, Russia; 3 Sirius University of Science and Technology, Sirius, Russia; 4 Laboratory of Cell Nucleus Structure and Dynamics, Saint Petersburg State University, Saint Petersburg, Russia; 5 Artificial Intelligence Research Institute, Moscow, Russia
[Sym 01] 3. Fundamental and applied 3D genomicsTADs and chromatin loops in human neurons in the context of cell-type specificity, in vitro maturation, and schizophrenia pathogenesisZagirova DianaZagirova D.1,2*, Ulianov K.1, Molodova M.1, Morozov K.1, Kononkova A.1, Morozova P.3, Efimova O.1, Ulianov S.4, Razin S.4, Khaitovich P.1, Khrameeva E.11 Center for Bio- and Medical Technologies, Skoltech, Moscow, Russia; 2 Institute for Information Transmission Problems of Russian Academy of Sciences (the Kharkevich Institute), Moscow, Russia; 3 Moscow Institute of Psychoanalysis, Moscow, Russia; 4 Institute of Gene Biology, Russian Academy of Sciences, Moscow, Russia
[Sym 01] 3. Fundamental and applied 3D genomicsStudy of the spatial organization of ribosomal DNA repeats in human cellsLuzhin ArtemLuzhin A.1*, Emmer D.1, Deriglazov D.1, Velichko A.1, Razin S.11 Institute of Gene Biology, RAS, Moscow, Russia
[Sym 01] 3. Fundamental and applied 3D genomicsSequence-encoded principles of chromatin compartmentalization are preserved across large evolutionary distancesPanchenko DaryaPanchenko D.1*, Gridina M.1,2, Glumova E.2,3, Nurislamov A.1, Fishman V.1,2,31 Sirius University of Science and Technology, Sirius, Sochi, Russia; 2 Institute of Cytology and Genetics, Novosibirsk, Russia; 3 Novosibirsk State University, Novosibirsk, Russia
[Sym 01] 3. Fundamental and applied 3D genomicsExpression switching of the human keratin genes type II is mediated by reorganization of spatial contacts with superenhancersShtompel Anastasia SergeevnaShtompel A.S.1,2*, Kalabusheva E.P.3, Luzhin A.V.1, Molodova M.N.1,4, Selivanovsky A.V.5, Khrameeva E.E.4, Ulianov S.V.1,2, Razin S.V.1,21 Institute of Gene Biology, RAS, Moscow, Russia2Lomonosov Moscow State University, Moscow, Russia3Koltzov Institute of Developmental Biology, RAS, Moscow, Russia4Skolkovo Institute of Science and Technology, Moscow, Russia5Moscow Institute of Physics and Technology, Moscow, Russia
[Sym 01] 3. Fundamental and applied 3D genomicsMechanisms of spatial chromatin architecture regulation in the human keratin gene locusDukich Mariya MiyatovnaDukich M.M. ¹, ²*, Shtompel A.S. ¹, ², Ulianov S.V. ¹, ², Kalabusheva E.P. ³, Razin S.V. ¹, ²¹ Laboratory of Structural-Functional Organization of Chromosomes, Institute of Gene Biology, Russian Academy of Sciences, Moscow, Russia² Department of Molecular Biology, Faculty of Biology, M.V. Lomonosov Moscow State University, Moscow, Russia³ Cell Biology Laboratory, Koltzov Institute of Developmental Biology, Russian Academy of Sciences, Moscow, Russia
[Sym 01] 3. Fundamental and applied 3D genomicsThree-dimensional nuclear organization of satellite DNA is conserved yet lineage-specific across great apesPopova Marina AleksandrovnaPopova M.1*, Komissarov A. 2, Khrameeva E.11 Center for Bio- and Medical Technologies, Skoltech, Moscow, Russia; 2 Neapolis University Pafos, Pafos, Cyprus* Marina.Popova2@skoltech.ru
[Sym 01] 4. Genome-wide transcriptomics (differential gene expression)Studying concatemerization using barcodes: a new perspective on recombination and transgene expressionSmirnov AlexanderSmirnov A.V.1*, Ryzhkova A.S.1, Yunusova A.M.1, Belokopytova P.S.1, Nurislamov A.R.2, Salnikov P.A.1, Koncevaya G.V.1, Zadorozhnyi D.V.2, Battulin N.R.1,3.1 Institute of Cytology and Genetics, SB RAS, Novosibirsk, Russia; 2 Sirius University of Science and Technology, Sochi, Russia.3 Novosibirsk State University, Novosibirsk, Russia
[Sym 01] 4. Genome-wide transcriptomics (differential gene expression)De novo transcriptome of males and females of the larch bud gall midge Dasineura rozhkovi Mam. et Nik.Shishkina OlgaShishkina O.D.1*, Deryuzhenko M.A..1, Adonyeva N.V. 1, Andreenkova O.V. 1, Shatskaya, N.V. 1, Vasiliev G.V.1, Gruntenko N.E. 11 Institute of Cytology and Genetics, SB RAS, Novosibirsk, Russia
[Sym 01] 4. Genome-wide transcriptomics (differential gene expression)Successful search for a new effective insecticide and transcriptome analysis of its possible mechanisms of actionGruntenko Nataly E.Gruntenko N.1*, Deryuzhenko M.1, Sharmankina S.1, Karpova E.1, Adonyeva N.1, Andreenkova O.1, Shishkina O.1, Burdina E.1, Yarovaya O.1,2, Kovaleva K.1,2, Luzina O.2, Oreshko V.1,2, Vasiliev G.1, Shatskaya N.11 Institute of Cytology and Genetics, SB RAS, Novosibirsk, Russia; 2 N.N. Vorozhtsov Novosibirsk Institute of Organic Chemistry, SB RAS, Novosibirsk, Russia
[Sym 01] 4. Genome-wide transcriptomics (differential gene expression)Altered Expression of Genes Associated with Neurogenesis and Extracellular Matrix Signaling in the Telencephalon of Danio rerio Following Traumatic Brain Injury and Administration of Caffeine-Treated Peripheral Immune CellsWang ShenghaoWang S.1*, Nekhoroshev E.V.1, Markova E.V.2, Savkin I.V.2, Serenko E.V.2, Amstislavskaya T. G 11 Novosibirsk State University, Novosibirsk, Novosibirsk, Russia; 2 Federal State Budgetary Scientific Institution «Research Institute of Fundamental and Clinical Immunology», Novosibirsk, Russia
[Sym 01] 4. Genome-wide transcriptomics (differential gene expression)Comparative analysis of transcriptomic markers of metabolic resistance in Musca domestica to different classes of insecticidesGarbaly VladislavaGarbaly V.1*1 All-Russian Research Institute of Veterinary Entomology and Arachnology - branch of the Federal State Budgetary Scientific Institution Federal Research Center of the Tyumen Scientific Center of the Siberian Branch of the Russian Academy of Sciences, Tyumen, Russia
[Sym 01] 4. Genome-wide transcriptomics (differential gene expression)Transcriptomic profile during diapause in Daphnia magnaVorobeva ElizavetaVorobeva E.2*, Gazizova G.2, Yerokhov P.1, Petrova M.1,6, Tukhbatullin A.1, Voronezhskaya E.1, Kozlova O.2, Sabirov M.5, Gusev O.3,5, Shagimardanova E.4,5, Galimov Y.11 Koltzov Institute of Developmental Biology of the Russian Academy of Sciences, Moscow, Russia2Institute of Fundamental Medicine and Biology, Kazan Federal University, Kazan, Russia3Graduate School of Medicine, Juntendo University, Tokyo, Japan4Skolkovo Institute of Science and Technology, Moscow, Russia5Life Improvement by Future Technologies (LIFT) Center, Moscow, Russia6Faculty of Biology, Lomonosov Moscow State University, Moscow, Russia
[Sym 01] 4. Genome-wide transcriptomics (differential gene expression)Disruptions in Transcriptional and Epigenetic Regulation of Associative Memory Formation in the Hippocampus of 5xFAD MiceValyaeva AnnaValyaeva A.A.1,2*, Fortygina P.A.1,3, Antonova O.A.1, Snigir E.A.1, Borodinova A.A.3, Svetlichnyy D.V.11 Center for Strategic Planning and Management of Biomedical Health Risks, Federal Medical and Biological Agency, Moscow, Russia; 2 Lomonosov Moscow State University, Moscow, Russia; 3 Institute of Higher Nervous Activity and Neurophysiology, RAS, Moscow, Russia
[Sym 01] 4. Genome-wide transcriptomics (differential gene expression)Evolutionary conservation of alternative splicing in flowering plantsKasianova AlexandraKasianova A.M.1,2*, Klepikova A.V.2, Logacheva M.D.1,2, Penin A.A.21 Center for Molecular and Cellular Biology, Skolkovo Institute of Science and Technology, Moscow, Russia; 2 Vavilov Institute of General Genetics, Moscow, Russia
[Sym 01] 4. Genome-wide transcriptomics (differential gene expression)Characterization of the nucleolar transcriptome of HeLa cellsKonovalova EugeniaKonovalova E.1*, Valyaeva A.1,2, Sheval E.2,31 Lomonosov Moscow State University, Faculty of Bioengineering and Bioinformatics, Moscow, Russia; 2 Lomonosov Moscow State University, Belozersky Institute of Physico-Chemical Biology, Moscow, Russia; 3 Lomonosov Moscow State University, Faculty of Biology, Department of Cell Biology and Histology, Moscow, Russia
[Sym 01] 4. Genome-wide transcriptomics (differential gene expression)Bioinformatic study of gene networks regulating redox metabolism in glioblastoma based on transcriptomic dataIvanov Oleg AndreevichIvanov O.A.1,2*, Kordyukova M.Y.1, Bulgakov T.K.1,2, Sorokina M.A.3,4, Gazizova G.R.1, Shagimardanova E.I.4,5, Gusev O.A.1,4, Kudryashova O.M.1,3, Belousov V.V.1,3,41 Federal State Budgetary Institution «Federal center of brain research and neurotechnologies» of the Federal Medical Biological Agency, Russia, Moscow2 Shemyakin-Ovchinnikov Institute of Bioorganic Chemistry, RAS, Russia, Moscow3 Pirogov Russian National Research Medical University, Russia, Moscow4 "LIFT" LLC, Russia, Moscow5 Skolkovo Institute of Science and Technology (Skoltech), Russia, Moscow
[Sym 01] 4. Genome-wide transcriptomics (differential gene expression)Salinity preadaptation induces cross-stress tolerance in the Yenisei hump-nosed whitefish larvae according to RNA-seq dataEpifantsev Alexander AlexeyevichA.A. Epifantsev 1*, E.A. Vakhteeva 1, A.G. Koroleva 1, T.V. Sidorova 1, S.A. Potapov 1, L.V. Sukhanova 1, O. Yu. Glyzina 1, S.I. Didorenko 2, A.A. Etingova 2, Yu. P. Sapozhnikova 11 Limnological Institute, SB RAS, Irkutsk, Russia; 2 Baikal Museum SB RAS, Irkutsk, Russia
[Sym 01] 4. Genome-wide transcriptomics (differential gene expression)Prediction and analysis of cellular differentiation trajectories from stem sells to lung progenitorsVitreschak Alexey GennadevichVitreschak A.G.1*, Lyubetsky V.A.1.1 Institute for Information Transmission Problems of the Russian Academy of Sciences (Kharkevich Institute), Moscow, Russia
[Sym 01] 4. Genome-wide transcriptomics (differential gene expression)Spatial transcriptomics in non-model organisms researchShagimardanova ElenaShagimardanova E.1,2*, Voronina T.2, Efimova O.3, Bilyalov A.2, Filatov N.2, Titova A.3, Kozlova O.4, Bydanov A.4, Gusev O.21 Genomic and bioimaging core facility, Skolkovo Institute of Science and technology, Moscow, Russia; 2 Life Improvement by Future Technologies Center, Moscow, Russia; 3 Center for Bio- and Medical Technologies, Skolkovo Institute of Science and technology, Moscow, Russia; 4 Institute of Fundamental Medicine and Biology, Kazan (Volga Region) Federal University, Kazan, Russia
[Sym 02] 1. Reconstruction, computational analysis and modeling of gene networks and metabolic pathwaysAutomated reconstruction and analysis of gene networks in the field of agrobiology and biomedicine using cognitive system ANDSystemIvanisenko Vladimir AleksandrovichIvanisenko V.A.*, Demenkov P.S., Ivanisenko T.V., Kleshchev M.A., Antropova E.A., Yatsyk I.V., Volyanskaya A.R., Adamovskaya A.V.1 Institute of Cytology and Genetics SB RAS, Novosibirsk, Russia
[Sym 02] 1. Reconstruction, computational analysis and modeling of gene networks and metabolic pathwaysA Tool for Deriving Frame-Based Flux Balance Analysis Models from Associative Gene Networks Associated with Human Metabolic DiseasesKazantsev FedorKazantsev F.V.1,2, Matushkin Yu.G.1, Lashin S.A.1,21 Institute of Cytology and Genetics SB RAS, Novosibirsk, Russia; 2 Novosibirsk State University, Novosibirsk, Russia
[Sym 02] 1. Reconstruction, computational analysis and modeling of gene networks and metabolic pathwaysDynamic regimes in a mathematical model of nitrite utilization by Escherichia coliDolmatova AnastasiaDolmatova A.A.1,2*, Lashin S.A.1, Matushkin Yu.G.1, Khlebodarova T.M.11 Institute of Cytology and Genetics, SB RAS, Novosibirsk, Russia; 2 Novosibirsk State University, Novosibirsk, Russia
[Sym 02] 1. Reconstruction, computational analysis and modeling of gene networks and metabolic pathwaysMathematical model for assessing the risk of sarcopenia in patients with rheumatoid arthritisDolmatova AnastasiaDolmatova A.A.1,3*, Starshova A.V.2,3, Omelchenko V.O.2, Lashin S.A.11 Institute of Cytology and Genetics, SB RAS, Novosibirsk, Russia; 2 Research Institute of Clinical and Experimental Lymphology - Branch of the Institute of Cytology and Genetics, SB RAS, Novosibirsk, Russia; 3 Novosibirsk State University, Novosibirsk, Russia
[Sym 02] 1. Reconstruction, computational analysis and modeling of gene networks and metabolic pathwaysStress adaptation through size changes: insights from the minimal cellMatyushkina DariaMatyushkina D.¹*, Lazareva A.¹, Vasilyeva E.¹, Polyakova A.¹, Shcherbakova O.¹, Zavalko F.¹, Svistunov A.¹, Butenko I.², Kovalenko A.², Sumarokova M.³, Pavlov R. ³, Bashkirov P. ³, Govorun V.¹¹ Laboratory of Simple Systems, Research Institute of Systems Biology and Medicine, Rospotrebnadzor, Moscow, Russia² Laboratory of Multi-omics Studies, Research Institute of Systems Biology and Medicine, Rospotrebnadzor, Moscow, Russia³ Laboratory of Bioelectrochemistry, Research Institute of Systems Biology and Medicine, Rospotrebnadzor, Moscow, Russia
[Sym 02] 1. Reconstruction, computational analysis and modeling of gene networks and metabolic pathwaysReconstruction of the associative gene network of the immuno-metabolic response in primary open-angle glaucoma using ANDSystemYatsyk IvanI.V. Yatsyk1*, V.A. Ivanisenko1,2,31 Institute of Cytology and Genetics, SB RAS, Novosibirsk, Russia; 2 Novosibirsk State University, Novosibirsk, Russia; 3 Kurchatov Genomic Center of the Institute of Cytology and Genetics, SB RAS, Novosibirsk, Russia
[Sym 02] 1. Reconstruction, computational analysis and modeling of gene networks and metabolic pathwaysGenome-scale modeling for the analysis and optimization of 2′-fucosyllactose biosynthesis in lactic acid bacteriaEsembaeva MaryamEsembaeva M.A.1*, Kulyashov M.A.1, Akberdin I.R.11 Department of Computational Biology, Scientific Center for Genetics and Life Sciences, Sirius University of Science and Technology, Sirius, Russia
[Sym 02] 1. Reconstruction, computational analysis and modeling of gene networks and metabolic pathwaysGenome-scale modeling in BioUML platform: from raw data to interactive metabolic mapsKulyashov Mikhail AndreevichKulyashov M.A.1*, Kachnov V.A.1, Esembaeva M.A.1, Melikhova E.V.11 Department of Computational Biology, Scientific Center for Genetics and Life Sciences, Sirius University of Science and Technology, Sirius, Russia
[Sym 02] 1. Reconstruction, computational analysis and modeling of gene networks and metabolic pathwaysBioEMMA: Automated Reconstruction of Metabolic Maps from KEGG Pathway Definitions for Interactive Flux VisualizationKachnov Vladislav AlexandrovichKachnov V.A.1*, Esembaeva M.A.1, Melikhova E.V.1, Kulyashov M.A.11 Department of Computational Biology, Scientific Center for Genetics and Life Sciences, Sirius University of Science and Technology, Sirius, Russia
[Sym 02] 1. Reconstruction, computational analysis and modeling of gene networks and metabolic pathwaysDynamic Modeling of Lactococcus lactis Central Metabolism: Integration of Growth Kinetics, Transcriptomic Regulation, and Oxygen AvailabilityKachnov Vladislav AlexandrovichKachnov V.A.1*, Sokolova T.S.1, Akberdin I.R.11 Department of Computational Biology, Scientific Center for Genetics and Life Sciences, Sirius University of Science and Technology, Sirius, Russia
[Sym 02] 1. Reconstruction, computational analysis and modeling of gene networks and metabolic pathwaysTissue-specific metabolic patterns of growth in chickens revealed by multi-omics analysisKaplan Vladimir SergeevichVladimir Kaplan1, *, Mikhail Kulyashov1, Ivan Evshin1,2, Nataliya Osik3, Lyudmila Yanshole3, Elena Shagimardanova5, Natalia Volkova6, Anastasia Vetokh6, Yuri Tsentalovich3, Oleg Gusev7,8, Fedor Kolpakov1, Ilya Akberdin11 Sirius University of Science and Technology, 354340 Sirius, Russia; 2 Biosoft.Ru, LLC., 630058 Novosibirsk, Russian Federation; 3 International Tomography Center SB RAS, Institutskaya str. 3a, Novosibirsk, 630090, Russia; 5 Genomics and Bioimaging Core Facility, Skolkovo Institute of Science and Technology, 143026 Moscow, Russia; 6 L. K. Ernst Federal Research Center for Animal Husbandry, Dubrovitsy, Podolsk, Moscow Oblast, 142132, Russia; 7 Intractable Disease Research Center, Graduate School of Medicine, Juntendo University, Tokyo 113-8421, Japan; 8 Institute of Biochemistry and Genetics, Ufa Federal Research Centre of the Russian Academy of Sciences (IBG UFRC RAS), 450054 Ufa, Russia
[Sym 02] 1. Reconstruction, computational analysis and modeling of gene networks and metabolic pathwaysIn silico analysis of miRNA regulatory networks to identify potential biomarkers of the clinical course of viral infectionsMikheeva Elena ValerievnaMikheeva E.V.1,2*, Timofeeva A.M.11 Institute of Chemical Biology and Fundamental Medicine, SB RAS, Novosibirsk, Russia; 2 State Budgetary Healthcare Institution of the Novosibirsk Region "Novosibirsk Clinical Central District Hospital", Novosibirsk Region, Krasnoobsk w. s., Russia
[Sym 02] 1. Reconstruction, computational analysis and modeling of gene networks and metabolic pathwaysUncovering Genetic and Metabolic Signatures of Antimicrobial Resistance in Escherichia coli via Physics-Informed Transcriptomic InferenceKazemzadeh ShimaKazemzadeh S. 1*, Akbarisaeed T. 2, Syromyatnikov M.Y. 1,31 Laboratory of Metagenomics and Food Biotechnology, Voronezh State University of Engineering Technologies, Voronezh, Russia2Department of Oncology, Hematology and Radiotherapy, Institute of Motherhood and Childhood, Pirogov Russian National Research Medical University (RNRMU), Moscow, Russia3Department of Genetics, Cytology and Bioengineering, Voronezh State University, Voronezh, Russia
[Sym 02] 1. Reconstruction, computational analysis and modeling of gene networks and metabolic pathwaysModelling Evolution in a Two-Sex Population with Non-overlapping GenerationsRevutskaya OksanaRevutskaya O.1*, Zhdanova O.1,2, Frisman E.31 Institute for Complex Analysis of Regional Problems, Far Eastern Branch, Russian Academy of Sciences, Birobidzhan, Russia; 2 Institute of Automation and Control Processes, Far Eastern Branch, Russian Academy of Sciences, Vladivostok, Russia
[Sym 02] 2. Mathematical immunology and epidemiologyMultiscale model of influenza infection initiation: integrating entry kinetics and tissue transportKosenko MaksimKosenko M.*State Research Center of Virology and Biotechnology “Vector”, Rospotrebnadzor
[Sym 02] 2. Mathematical immunology and epidemiologyPrediction of T-cell epitopes interactions with major histocompatibility complex I using their structural formulasSmirnov Anton SergeevichSmirnov A.S1,2,*, Filimonov D.A.3, Lagunin A.A.1,31 Pirogov Russian National Research Medical University, Moscow, Russia; 2 Bochkov Research Centre for Medical Genetics, Moscow, Russia; 3 Orekhovich Institute of Biomedical Chemistry, Moscow, Russia
[Sym 02] 2. Mathematical immunology and epidemiologyModelling the structural, spatial and contextual organization and regulation of immune processesBocharov GennadyBocharov G.1,2,3*, Grebennikov D.1,2,3, Savinkov R.1,2,31 Marchuk Institute of Numerical Mathematics of the Russian Academy of Sciences (INM RAS), Moscow, Russia; 2 Moscow Center for Fundamental and Applied Mathematics at INM RAS, Moscow, Russian Federation; 3 Institute of Computer Science and Mathematical Modelling, Sechenov University, Moscow, Russia
[Sym 02] 2. Mathematical immunology and epidemiologyBistable epigenetic switching leads to acquired resistance to ibrutinib in B-cell lymphomas: Insights from Mathematical Modeling.Kosinsky YuriKosinsky Yu.A.1*, Peskov K.V.11 M&S Decisions LLC, Moscow, Russia
[Sym 02] 2. Mathematical immunology and epidemiologySystems biological study of Long COVID in ORCHESTRA Luxembourg project: preparations for the next epidemicsKolodkin AlexeyKolodkin A.N.1,2*, Orlov J.L.31 Sirius University of Science and Technology, Sirius, Russia; 2 Luxembourg Institute of Health, Luxembourg3 Sechenov University, Moscow, Russia
[Sym 02] 2. Mathematical immunology and epidemiologyMathematical modeling of LCMV infection for investigation of acute and chronic immune response.Nikitich AntoninaNikitich A.1,2*1 Institute of Numerical Mathematics RAS, Moskow, Russia; 2 LLC Simurgpharm, Moscow, Russia
[Sym 02] 2. Mathematical immunology and epidemiologyTransport modeling in lymphatic system of humans and animalsGrebennikov DmitryGrebennikov D.1,2,3*1 Marchuk Institute of Numerical Mathematics of the Russian Academy of Sciences (INM RAS), Moscow, Russia; 2 Moscow Center for Fundamental and Applied Mathematics at INM RAS, Moscow, Russia; 3 Sechenov First Moscow State Medical University of the Ministry of Health of the Russian Federation (Sechenov University), Moscow, Russia
[Sym 02] 2. Mathematical immunology and epidemiologyProbabilistic forecasting of the spread of Tuberculosis in the regions of the Russian FederationKrivorotko OlgaKrivorotko O.1*, Neverov A.1, Kaminskiy G.2, Zyatkov N.1, Schwartz Y.31 Sirius University of Science and Technology, Sirius, Sochi, Russia; 2 Tula Regional Clinical Center for the Prevention and Control of AIDS and Infectious Diseases, Ministry of Health of the Russian Federation, Tula, Russia; 3 Novosibirsk TB Research Institute, Ministry of Health of the Russian Federation, Novosibirsk, Russia
[Sym 02] 2. Mathematical immunology and epidemiologyA time-adaptive optimization approach for reconstructing immune response in a mathematical model of acute HIV infection using clinical dataGainova IrinaGainova I.1*1 Sobolev Institute of Mathematics, SB RAS, Novosibirsk, Russia
[Sym 03] 1. Structural biology of proteins, nucleic acids and membranesWeak interactions, strong effects: structural insights into single-pass receptors function from NMR spectroscopyLushpa VladislavLushpa V.1,2,3*, Kornilov F.1,2, Bershatsky Y.1,2,3, Goncharuk M.1, Mineev K.4, Goncharuk S.1,2, Bocharov E.1,21 Shemyakin-Ovchinnikov Institute of Bioorganic Chemistry of the Russian Academy of Sciences, 117997 Moscow, Russia; 2 Moscow Institute of Physics and Technology, 141701 Dolgoprudny, Russia; 3 Institution National Medical Research Center of Cardiology Named after Academician E.I. Chazov, Ministry of Health of the Russian Federation; 121552 Moscow, Russia; 4 Institute of organic chemistry and chemical biology, Goethe University Frankfurt, 60438 Frankfurt am Main, Germany
[Sym 03] 1. Structural biology of proteins, nucleic acids and membranesComplementing protein structure with modeling and big data to study DNA repairZharkov Dmitry OlegovichZharkov D.O.1,2*1 Novosibirsk State University, Novosibirsk, Russia; 2 SB RAS Institute of Chemical Biology and Fundamental Medicine, Novosibirsk, Russia
[Sym 03] 1. Structural biology of proteins, nucleic acids and membranesA unique feature of rumicidins is the key to creating a new class of antibioticsPaleskava AlenaPaleskava A.1,2*, Shulenina O.1, Tolstyko E.1, Pichkur E.1,3, Konevega A.1,2,31 Petersburg Nuclear Physics Institute named by B.P. Konstantinov of National Research Centre “Kurchatov Institute”, Gatchina, Russia; 2 Peter the Great St.-Petersburg Polytechnic University, St. Petersburg, Russia; 3 National Research Centre “Kurchatov Institute”, Moscow, Russia
[Sym 03] 1. Structural biology of proteins, nucleic acids and membranesCoupling between protein-protein and protein-lipid interactions in signal transduction by bitopic membrane receptorsBocharov Eduard ValerievichBocharov E.V.1,2*1 Moscow Institute of Physics and Technology, Dolgoprudny, Russia; 2 Shemyakin-Ovchinnikov Institute of bioorganic chemistry RAS, Moscow, Russia
[Sym 03] 1. Structural biology of proteins, nucleic acids and membranesSearch of Dengue virus serine protease oligopeptide inhibitorsPushkarevskaya Anna AnatolevnaPushkarevskaya A.1*, Sakovina L.1,2, Lomzov A.11 Institute of Chemical Biology and Fundamental Medicine, SB RAS, Novosibirsk, Russia; 2 Novosibirsk State University, Novosibirsk, Russia
[Sym 03] 1. Structural biology of proteins, nucleic acids and membranesPulsed Dipolar EPR Spectroscopy for Structural Characterization of Conformationally Diverse DNA and RNA Ensembles and Their ComplexesKrumkacheva OlesyaKrumkacheva O.A. 1*, Kolokolov M.I. 1, Sannikova N.E. 1, Graifer D.M.2, Malygin A.K.2, Bagryanskaya E.G.3, Fedin M.V.11 International Tomography Center SB RAS, Novosibirsk, Russia; 2 Institute of Chemical Biology and Fundamental Medicine SB RAS, Novosibirsk, Russia; 3 N.N. Vorozhtsov Novosibirsk Institute of Organic Chemistry SB RAS, Novosibirsk, Russia
[Sym 03] 1. Structural biology of proteins, nucleic acids and membranesMethods for calculating antibody affinityVasyuchenko Ekaterina PavlovnaVasyuchenko E.P.1,2*, Shaburova E.V.1,3, Antonets D.V.11 MSU Institute for Artificial Intelligence, Moscow, Russia2Faculty of Biology, MSU, Moscow, Russia3Institute of Cytology and Genetics, SB RAS, Novosibirsk, Russia
[Sym 03] 1. Structural biology of proteins, nucleic acids and membranesCrystal Structure of the Songling Virus NucleoproteinYanshin AlexeyYanshin A. 1,2, Ukladov Е. 2,3, Pospelov V. 4, Imatdinov I.1, Rizhikov Y. 4, Borshchevsky V. 4, Gladysheva A.11 State Research Center of Virology and Biotechnology "Vector" of Rospotrebnadzor, Koltsovo, Russia; 2 Novosibirsk State University, Novosibirsk, Russia; 3 SRF “SKIF” Koltsovo, Russia; 4 Moscow Institute of Physics and Technology, Moscow, Russia* alexei.yanshin@mail.ru
[Sym 03] 1. Structural biology of proteins, nucleic acids and membranesComputational and experimental characterization of amyloidogenic properties of human ribosomal proteinsSukhanova Xenia VladimirovnaSukhanova X. 1*, Lashkul V. 1, Mijanovich O. 1, Ptyushkina M. 1, Andreychuk J. 1, Velizhanina M. 1, Aksenova A. 1, Rubel A. 11 Saint Petersburg State University, Laboratory of amyloids biology, Saint Petersburg, Russia
[Sym 03] 1. Structural biology of proteins, nucleic acids and membranesStudying the structure of Trk neurotrophin receptors and their interactions with drugs by multiple methodsKot ErikKot E.1*, Shulepko M.1, Savitskaya A.2, Liu T.1, Shoshin A.1, Ma M.1, Vilar M.3, Mineev K.4, Goncharuk S.2, Lyukmanova E.1,21 Shenzhen MSU-BIT University, Shenzhen, China; 2 Shemyakin-Ovchinnikov Institute of Bioorganic Chemistry RAS, Moscow, Russia; 3 Instituto de Biomedicina de Valencia-CSIC, Valencia, Spain; 4 Institute of Organic Chemistry and Chemical Biology, Goethe University Frankfurt, Frankfurt am Main, Germany
[Sym 03] 1. Structural biology of proteins, nucleic acids and membranesLigand-mediated regulation of the oncochannel TRPV6 ion-conducting poreVeretenenko Irina IvanovnaVeretenenko I.I.1,2*, Trofimov Y.A.1, Efremov R.G.1,2,3,41 Shemyakin-Ovchinnikov Institute of bioorganic chemistry RAS, Moscow, Russia; 2 Moscow Institute of Physics and Technology (National Research University), Dolgoprudny, Russia; 3 Research Institute for Systems Biology and Medicine, Moscow, Russia; 4 National Research University «Higher School of Economics», Moscow, Russia
[Sym 03] 1. Structural biology of proteins, nucleic acids and membranesAssessment of the conformational mobility of the Tyr77 residue in chymosins from the polar bear (Ursus maritimus) and flying fox (Pteropus alecto) using experimental and computational methodsUkladov Egor OlegovichUkladov E.O.1,2, Belenkaya S.V. 3,4, Shcherbakov D.N. 3,4, Shevtsov M.B.5, Borshchevsky V.I. 5, Arkhipov S.G.¹1 - SRF "SKIF", Koltso, Russia2 - Novosibirsk State University, Novosibirsk, Russia3 - State Research Center of Virology and Biotechnology “Vector”, 630559 Kol’tsovo, Russia4 - Altai State University, Barnaul, Russia5 - Center for Molecular Mechanisms of Aging and Age-Related Diseases, Moscow Institute of Physics and Technology, Moscow, Russia
[Sym 03] 1. Structural biology of proteins, nucleic acids and membranesModulation of the TRPA1 channel by spider toxinsShenkarev ZakharShenkarev Z.O.1*, Ivannikov A.D.1,2, Shulepko M.A.2, Mironov P.A.1, Kuznetsov A.V.2, Zhivov A.E.1, Kulbatskii D.S.1, Lyukmanova E.N.1,2<*1 Shemyakin-Ovchinnikov Institute of Bioorganic Chemistry, Russian Academy of Sciences, 119997, Moscow, Russia.2 Shenzhen MSU-BIT University, 518172, Shenzhen, China
[Sym 03] 1. Structural biology of proteins, nucleic acids and membranesStructural insights into dimerization of insect sodium channel in lipid membraneLyukmanova EkaterinaLyukmanova E.N.1,2,3, *, Kocharovskaya M.V.1,2, Rybchenko V.1, Shulepko M.A.1, Bychkov M.L.2, Orlov N.A.1,3, Orekhov P.S.1,3, Feofanov A.V.1,3,Kirpichnikov M.P.2,3, Shenkarev Z.O.2, *1 Shenzhen MSU-BIT University, Shenzhen, China; 2 Shemyakin-Ovchinnikov Institute of Bioorganic Chemistry, Russian Academy of Sciences, Moscow, Russia; 3 Faculty of Biology, Lomonosov Moscow State University, Moscow, Russia
[Sym 03] 1. Structural biology of proteins, nucleic acids and membranesModeling the Structure of rIGSRNA16 Using AFM and CafeMol/HORNET: Analysis of Conformational Changes under Heat StressShestun PavelShestun P.A.1*, Karpushkina I.A.1, Mokin Ya.I.2, Gavrilova A.A.2, Dubrovin E.V.3, Fonin A.V.2*1 ITMO University, St. Petersburg, Russia; 2 Institute of Cytology RAS, St. Petersburg, Russia; 3 A.N. Frumkin Institute of Physical Chemistry of the Russian Academy of Sciences, Moscow, Russia
[Sym 03] 1. Structural biology of proteins, nucleic acids and membranesCurrent Status of the SRF SKIF Infrastructure for Structural Biology ResearchArkhipov SergeyArkhipov S.¹*, Vinokurov Z.¹, Goldenberg B.¹, Poteryaev V.¹, Zubavichus Ya.¹1 Synchrotron Radiation Facility - Siberian Circular Photon Source "SKlF" Boreskov Institute of Catalysis of Siberian Branch of the Russian Academy of Sciences (SRF "SKIF"), Koltsovo, Russia
[Sym 03] 1. Structural biology of proteins, nucleic acids and membranesMolecular pharmacology and gating of TRP channelsSobolevsky AlexanderSobolevsky A.Columbia University, NY, USA
[Sym 03] 1. Structural biology of proteins, nucleic acids and membranesA molecular biophysical platform for studying membrane proteinsEfremov RomanEfremov R.G.1,2*1 Shemyakin-Ovchinnikov Institute of Bioorganic Chemistry RAS, Moscow, Russia; 2 Research Institute for Systems Biology and Medicine, Moscow, Russia
[Sym 03] 1. Structural biology of proteins, nucleic acids and membranesActive Knowledge Base for Automatically Solvingthe Problem of Analyzing the Secondary Structure of RNAMarchenko MikhailMarchenko, Mikhail1,3*, Perepelkin, Vladislav 1,3,4, Podkolodnyy, Nikolay 1,2,3, Shabunin, Vladimir 1,3, Gartman, Alexander1,3, Titov, Igor2,31 Institute of Computational Mathematics and Mathematical Geophysics, SB RAS, Novosibirsk, Russia; 2 Institute of Cytology and Genetics, SB RAS, Novosibirsk, Russia; 3 Novosibirsk National Research State University, Novosibirsk, Russia? 4 Novosibirsk State Technical University, Novosibirsk, Russia
[Sym 03] 2. Pharmacology, cheminformatics and chemical biologyNeuroimmunomodulatory properties and molecular targets of halonal in alcoholismSavkin Ivan VladimirovichI.V. Savkin1*, T.V. Shushpanova2, E.V. Markova11 Federal State Budgetary Scientific Institution “Research Institute of Fundamental and Clinical Immunology”, Novosibirsk, Russia 2Mental Health Research Institute, Tomsk National Research Medical Center, Russian Academy of Sciences, Tomsk, Russia
[Sym 03] 2. Pharmacology, cheminformatics and chemical biologyFormation of a panel of new ibuprofen conjugates based on HSA ligand drugs for the prevention and treatment of Alzheimer’s diseaseMachulin AndreyMachulin A.1*, Deryusheva E.2, Litus E.2, Dakhno P.2,3, Alikova V.2, Shevelyova M. 21 Skryabin Institute of Biochemistry and Physiology of Microorganisms, Pushchino Scientific Center for Biological Research of the Russian Academy of Sciences, Pushchino, Russia; 2 Institute for Biological Instrumentation, Pushchino Scientific Center for Biological Research of the Russian Academy of Sciences, Pushchino, Russia; 3 Kuban State University, Krasnodar, Russia
[Sym 03] 2. Pharmacology, cheminformatics and chemical biologyMachine Learning prediction of enantioselectivity in the asymmetric Mannich reaction using a combination of fragment and three-dimensional descriptorsVasechkin KonstantinVasechkin K.V.1*, Nikitin I.D.11 Kharkevich Institute for Information Transmission Problems of the Russian Academy of Sciences, Moscow, Russia
[Sym 03] 2. Pharmacology, cheminformatics and chemical biologyAn Integrated Web Platform for Predicting Inhibition and Substrate Specificity of Human Membrane TransportersRudik AnastasiaRudik A.1, Khodos G.2, Stolbov L.1, Lagunin A.1,2, Filimonov D.1, Poroikov V. 11 Department of Bioinformatics, Institute of Biomedical Chemistry, 10 bldg. 8, Pogodinskaya str., Moscow, 119121, Russia; 2 Department of Bioinformatics, Pirogov Russian National Research Medical University, 1, Ostrovitianova str., Moscow, 117513, Russia
[Sym 03] 2. Pharmacology, cheminformatics and chemical biologyThe Antivir Database and Computational Models for Predicting the Antiviral Activity of Drug-Like CompoundsTarasova Olga A.Tarasova O.A.*, Karasev D.A., Biziukova N.Yu., Filippova T.A., Rudik A.V., Kuzikov A.V., Filimonov D.A., Veselovsky A.V., Shumyantseva V.V. Poroikov V.V.1 Institute of Biomedical Chemistry, Moscow, Russia
[Sym 03] 2. Pharmacology, cheminformatics and chemical biologyFrom big data to new pharmaceuticals: The role of artificial intelligence and machine learningPoroikov Vladimir VasilievichPoroikov V.V.1 Institute of Biomedical Chemistry, Moscow, Russia
[Sym 04] Big biological data analysis, ontologies and artificial intelligenceSemi-automated algorithm for image analysis of respiratory organoidsDemchenko AnnaDemchenko A.1*, Balyasin M.2, Kondratyeva E.1, Kyian T.1, Smirnikhina S.11 Research Centre for Medical Genetics, Moscow, Russia; 2 Peoples' Friendship University of Russia named after Patrice Lumumba, Novosibirsk, Russia
[Sym 04] Big biological data analysis, ontologies and artificial intelligenceDe Novo Sampling and Sequence Derived Structural Descriptors Based In-silico Identification of Host-Pathogen Protein InteractionsWajid Arshad AbbasiWajid Arshad Abbasi1, *, Momina Ali1, Maryum Bibi1, Amsa Shabir2, Saiqa Andleeb3, Syed Ali Abbas11 Computaional Biology and Data Analysis Lab., Department of Computer Sciences & Information Technology, King Abdullah Campus, University of Azad Jammu & Kashmir, Muzaffarabad, 13100, Pakistan2Department of Software Engineering, Capital University of Science & Technology (CUST), Islamabad, Pakistan3Biotechnology Lab., Department of Zoology, King Abdullah Campus, University of Azad Jammu & Kashmir, Muzaffarabad, 13100, Pakistan
[Sym 04] Big biological data analysis, ontologies and artificial intelligenceApplication of deep learning methods for chromothripsis detection using structural variation dataKaritskaia Polina EvgenievnaKaritskaia P.1*, Vyatkin Y.11 Novosibirsk State University, Novosibirsk, Russia
[Sym 04] Big biological data analysis, ontologies and artificial intelligenceMeta-analysis of transcriptomes and RT-PCR results under conditions of high data sparsity using Drosophila melanogaster as a modelDeryuzhenko Maksim AlekseevichDeryuzhenko M.¹*, Ponomarenko M.¹, Shishkina O.¹, Gruntenko N.¹¹ Institute of Cytology and Genetics, SB RAS, Novosibirsk, Russia
[Sym 04] Big biological data analysis, ontologies and artificial intelligenceLHDetect3: a software tool for quantitative assessment of soybean leaf pubescence using deep learningGenaev MikhailGenaev M.A.1,2*, Afonnikov D.A.1,2,31 Institute of Cytology and Genetics, SB RAS, Novosibirsk, Russia; 2 Kurchatov Genomic Center of the Institute of Cytology and Genetics, SB RAS, Novosibirsk, Russia; 3 Novosibirsk State University, Novosibirsk, Russia
[Sym 04] Big biological data analysis, ontologies and artificial intelligenceAutomated Extraction of Medical Dataset References from Biomedical PublicationsHaider TaqiTaqi H.1*, Evgeniy N.P.11 Faculty of Mechanics & Mathematics, Novosibirsk State University, Russia
[Sym 04] Big biological data analysis, ontologies and artificial intelligenceDevelopment and Validation of Machine Learning Models and an Interactive Web System for Early Prediction of Diabetes and HypertensionZhao ZhimengZhimeng Zhao, Ming Chen*Department of Bioinformatics, College of Life Sciences, Zhejiang University, Hangzhou 310058, China
[Sym 04] Big biological data analysis, ontologies and artificial intelligenceSelf-supervised pretraining of YOLOv12x-obb model with DINOv2 outperforms results of GWHD-2020 and 2021 contest winners while using 28 times less labelled dataKozhekin Mikhail VictorovichKozhekin M.1,2*, Genaev M.1,2, Afonnikov D.1,21 Institute of Cytology and Genetics, SB RAS, Novosibirsk, Russia; 2 Kurchatov Genomic Center of the Institute of Cytology and Genetics, SB RAS, Novosibirsk, Russia
[Sym 04] Big biological data analysis, ontologies and artificial intelligenceThe main components of genetic data quality controlSukhikh NatalieSukhikh N.A.1*#, Mitrofanov S.I.1#, Golubnikova L.A.1, Grammatikati K.S.1, Pilipenko M.N.1, Ivanov M.V.1, Kashtanova D.A.1, Shpakova T.A.1, Sergeev A.P.1, Frolova L.V.1, Pak E.V.1, Svetlichnyy D.V.1, Nekrasova A.I.1, Romanova S.V.1, Ivashechkin A.A.1, Varlamova O.V.1, Shestakov D.A.1, Mamchur A.A.1, Rumyantseva A.M.1, Blinova O.I.1, Terekhov M.V.1, Maksyutina V.V.1, Kazakova P.G.1, Bulanova N.V.1, Grebnev P.A.1, Makhotenko A.V.1, Snigir E.A.1, Marchenko O.M.1, Maralova E.D.1, Shingaliev A.S.1, Zakubansky A.V.1, Daniel V.V.1, Yudin V.S.1, Makarov V.V.1, Keskinov A.A.1, Kraevoy S.A.1, Yudin S.M.1, Skvortsova V.I.21 Federal State Budgetary Institution «Centre for Strategic Planning and Management of Biomedical Health Risks» of the Federal medical and biological agency (Centre for Strategic Planning, of the Federal medical and biological agency), Moscow, Russia; 2 The Federal Medical Biological Agency (FMBA of Russia), Moscow, Russia
[Sym 04] Big biological data analysis, ontologies and artificial intelligencePowerNovo2: A Non-Autoregressive De Novo Peptide Sequencing Model Based on Generative Normalizing FlowsPetrovskiy DenisPetrovsky D.1*, Nikolsky K.1, Kopylov A.1, Rudnev V.1, Kulikova L.1, Kaisheva A.11 Federal State Budgetary Scientific Institution "V.N. Orekhovich Research Institute of Biomedical Chemistry" of the Russian Academy of Sciences, Moscow, Russia
[Sym 04] Big biological data analysis, ontologies and artificial intelligenceBenchmarking and improving Connectivity Maps for accurate transcriptome based lead generationMishra RichaMishra R.1*, Ahmad S.1**1 School of Computational and Integrative Sciences, Jawaharlal Nehru University, New Delhi, India
[Sym 04] Big biological data analysis, ontologies and artificial intelligenceThe Role of Oligodendrocytes in the Pathophysiology of SchizophreniaLin KongxuanKongxuan Lin1, Wenjing Jia1, Haiqing Si2*, Quan Wang1*1 Department of Biomedical Engineering, Nanjing University of Aeronautics and Astronautics, Nanjing 211106, China; 2 College of General Aviation and Flight, Nanjing University of Aeronautics and Astronautics, Nanjing 211106, China
[Sym 04] Big biological data analysis, ontologies and artificial intelligenceThe trajectory of human organism development reflected in routine blood biomarkersManolov AleksanderManolov A. 1*, Shatokhin A. 1, Pavlenko A. 1, Klochkov K1, Likhacheva P. 2, Fedorov D. 1, Govorun V. 11 Research Institute of Systems Biology and Medicine of Rospotrebnadzor, Moscow, Russia; 2 Moscow Institute of Physics and Technology (National Research University), Moscow, Russia
[Sym 04] Big biological data analysis, ontologies and artificial intelligenceThe application of convolutional neural networks for detecting VJ fragmentsBelyakov Matvei DmitrievichBeliakov M.1*, Vlasova E.2,3, Shugay M.31 Saint-Petersburg State Univeristy, Saint-Petersburg, Russia; 2 National Research University ITMO, Saint-Petersburg, Russia; 3 Russian National Research Medical Institute, Moscow, Russia
[Sym 04] Big biological data analysis, ontologies and artificial intelligenceComparisons of methods for reference-independent search for spreading organisms in metagenomic sequencing dataPopov Nikolay SergeevichN.S. Popov, 1,2*, V.V. Panova1, A.I. Manolov1, A.N. Lukashev1,2, E.N. Ilina11 Research Institute for Systems Biology and Medicine (RISBM), Moscow, Russia; 2 Martsinovsky Institute of Medical Parasitology, Tropical and Vector-Borne Diseases, Sechenov University, Moscow, Russia
[Sym 04] Big biological data analysis, ontologies and artificial intelligenceNew statistical approaches for studying the morphological diversity of barbs in Lake Tana (Ethiopia) using geometric morphometricsYakovleva EkaterinaYakovleva E.1*, Shkil F.1,21 Koltzov Institute of Developmental Biology, RAS, Moscow, Russia; 2 A.N. Severtsov Institute of Ecology and Evolution of the Russian Academy of Sciences, RAS, Moscow, Russia
[Sym 04] Big biological data analysis, ontologies and artificial intelligenceA Framework for Reconstructing IgG-Specific N-Glycome from Total Plasma N-Glycome: Enabling Large-Scale GWAS of Protein-Specific GlycosylationSoplenkova AnnaAnna Soplenkova1*, Denis Maslov1, Anna Timoshchuk1, Domagoj Kifer2, Ana Cvetko3, Michel Georges4, Claire J. Steves5, Cristina Menni5,6,7, Sodbo Sharapov1, Gordan Lauc2,3, Yurii S. Aulchenko1,81 MSU Institute for Artificial Intelligence, Lomonosov Moscow State University, Moscow, Russia; 2 University of Zagreb Faculty of Pharmacy and Biochemistry, Zagreb, Croatia3 Genos Glycoscience Research Laboratory, Zagreb, Croatia4 Unit of Animal Genomics, GIGA Institute, University of Liège, Liège, Belgium5 Department of Twin Research & Genetic Epidemiology, King’s College London, London, UK6 Department of Pathophysiology and Transplantation, Università Degli Studi di Milano, Milan, Italy.7 Fondazione IRCCS Cà Granda Ospedale Maggiore Policlinico, Angelo Bianchi Bonomi Hemophilia andThrombosis Center, Milan, Italy.8 Institute of Cytology and Genetics SB RAS, Novosibirsk, Russia
[Sym 04] Big biological data analysis, ontologies and artificial intelligenceStructure-informed proteome-wide mining of antimicrobial resistance determinants in Neisseria gonorrhoeae using structural similarity searchGnanasekar PranavathiyaniGnanasekar Pranavathiyani1*1 Division of Bioinformatics, School of Chemical and Biotechnology, SASTRA Deemed University, Thanjavur 613401, Tamil Nadu, India
[Sym 04] Big biological data analysis, ontologies and artificial intelligenceAutomated HPO term annotation in Russian-language medical texts using a domain-adapted language model and a graph neural networkYarovoy ArtemYarovoy A.A.1*, Soloshenko M.A.1, Sparber P.A.1, Shchagina O.A.1, Sharkov A.A.2,3, Ryzhkova O.P.1, Borovikov A.O.11 Research Centre for Medical Genetics (RCMG), Moscow, Russia; 2 Veltischev Research and Clinical Institute for Pediatrics and Pediatric Surgery, Pirogov Russian National Research Medical University, Moscow, Russia; 3 Genomed LLC, Moscow, Russia
[Sym 04] Big biological data analysis, ontologies and artificial intelligenceSpecialized differential information systems versus global integrated artificial intelligenceShlikht AnatolyShlikht A. 1*, Kramorenko N.1, Tamkovich С.2, Shtam Т.31 Far Eastern Federal University, Vladivostok, Russia; 2 Novosibirsk State University, Novosibirsk, Russia, 3 NRC «Kurchatov Institute» PNPI, Gatchina, Russia
[Sym 04] Big biological data analysis, ontologies and artificial intelligenceMegaproteomics of minimal cellLazareva AnastasiaLazareva A.1*, Matyushkina D.1, Butenko I.1, Kovalenko A.1, Vasileva E.1, Govorun V.11 Scientific Research Institute for Systems Biology and Medicine, Moscow, Russia
[Sym 04] Big biological data analysis, ontologies and artificial intelligenceA New Web-Accessible Tool for High-Precision De Novo Peptide SequencingNikolsky Kirill SergeevichNikolsky K.1*, Petrovskiy D.1, Kopylov A.1, Rudnev V.1, Kulikova L.1, Kaysheva A.11 V.N. Orekhovich Institute of Biomedical Chemistry, Russian Academy of Sciences, Moscow, Russia
[Sym 04] Big biological data analysis, ontologies and artificial intelligenceNorm and normality as objects of theoretical research.Gorbunov KonstantinGorbunov K.1*, Benediktova J.11 Research Institute for Systems Biology and Medicine, Moscow, Russia
[Sym 04] Big biological data analysis, ontologies and artificial intelligenceA machine learning-based method for biomedical text miningBiziukova Nadezhda YurievnaBiziukova N.1*, Tarasova O.1, Rudik A.1, Poroikov V.11 Institute of Biomedical Chemistry, Moscow, Russia
[Sym 04] Big biological data analysis, ontologies and artificial intelligenceMachine learning for integrative multi-omics clustering and feature gene identificationZhang ZhangZhang Z.1,2,3*1 National Genomics Data Center, China National Center for Bioinformation, Beijing 100101, China; 2 Beijing Institute of Genomics, Chinese Academy of Sciences, Beijing 100101, China; 3 University of Chinese Academy of Sciences, Beijing 101408, China
[Sym 04] Big biological data analysis, ontologies and artificial intelligenceDBP-Finder: Sequence-based prediction of DNA-binding proteinsShaburova ElizavetaShaburova E.V.1,2*, Gavrilenko A.D.1, Maslov D.E.1, Shtokalo D.N.1, Vyatkin Y.V.1, Ramensky V.E.1,3,4, Antonets D.V.11 MSU Institute for Artificial Intelligence, Lomonosov Moscow State University, Moscow, Russia; 2 Institute of Cytology and Genetics, SB RAS, Novosibirsk, Russia; 3 National Medical Research Center for Therapy and Preventive Medicine of the Ministry of Healthcare of Russian Federation, Moscow, Russia; 4 Department of Bioengineering and Bioinformatics, Lomonosov Moscow State University, Moscow, Russia
[Sym 04] Big biological data analysis, ontologies and artificial intelligenceSemantic Decomposition of Functional Modules via Sparse OptimizationMokin Yakov IvanovichY.I. Mokin*, I.M. Kuznetsova, A.V. FoninInstitute of Cytology RAS, Saint Petersburg, Russia
[Sym 04] Big biological data analysis, ontologies and artificial intelligenceUsing deep learning to predict epistatic interactions of protein mutationsKolomnikova Daria YurievnaKolomnikova D.Y.1*, Shtokalo D.N.2, Ramensky V.E.2,3,4, Trofimova E.Y.2, Shaburova E.V.2,51 Novosibirsk State University, Novosibirsk, Russia; 2 MSU Institute for Artificial Intelligence, Lomonosov Moscow State University, Moscow, Russia; 3 National Medical Research Center for Therapy and Preventive Medicine of the Ministry of Healthcare of Russian Federation, Moscow, Russia; 4 Department of Bioengineering and Bioinformatics, Lomonosov Moscow State University, Moscow, Russia; 5 Institute of Cytology and Genetics, SB RAS, Novosibirsk, Russia
[Sym 04] Big biological data analysis, ontologies and artificial intelligenceCell Type-Specific Prediction of Functional Genomic Signals from DNA Using Human-Readable Experimental DescriptionsAspidova AlenaAspidova A1*, Shadskii A1,2, Kuratov Y1, Belokopytova P3, Tsoi E3, Koksharova G2, Ivanov A3, Burtsev M4, Fishman V1,2,31 AIRI2 Sirius University3 Institute of Cytology and Genetics SB RAS4 London Institute of Mathematical Sciences
[Sym 04] Big biological data analysis, ontologies and artificial intelligenceDeep models and epistatic interactions of amino acid substitutions in proteinsRamensky VasilyRamensky V.E.1,2,3 *, Shilova P.A.4, Kolomnikova D.Y.5, Trofimova E.Y.1, Maslov D.E.1,5, Shaburova E.V.1,61 MSU Institute for Artificial Intelligence, Lomonosov Moscow State University, Moscow, Russia; 2 National Medical Research Center for Therapy and Preventive Medicine of the Ministry of Healthcare of Russian Federation, Moscow, Russia; 3 Department of Bioengineering and Bioinformatics, Lomonosov Moscow State University, Moscow, Russia; 4 Moscow Institute of Physics and Technology (national research university), Moscow, Russia; 5 Novosibirsk State University, Novosibirsk, Russia; 6 Institute of Cytology and Genetics, SB RAS, Novosibirsk, Russia
[Sym 04] Big biological data analysis, ontologies and artificial intelligenceComparative analysis of avian influenza virus pathogenicity prediction using machine learning methods and in vivo experimental dataBragina MariaBragina M.1*, Kolosova N.1, Perfilyeva O.1, Gudymo A.1, Vasiltsova N.1, Danilchenko N.1, Egorova M.1, Marchenko V.11 FBRI State Research Centre of Virology and Biotechnology “Vector”, Rospotrebnadzor, Koltsovo, Russia
[Sym 04] Big biological data analysis, ontologies and artificial intelligenceTrends of AI tools applications in Life sciences educationOrlov Yuriy LOrlova N.G. 1, Orlov Y.L. 2,3*,1 Financial University under the Government of Russian Federation, Moscow, Russia; 2 I.M.Sechenov First Moscow State Medical University (Sechenov University), Moscow, Russia; 3 Novosibirsk State University, Novosibirsk, Russia
[Sym 04] Big biological data analysis, ontologies and artificial intelligenceEvolutionary inferences from the analysis of mutation dynamics in the SARS-CoV-2 replication-transcription complexPalyanov AndreyA.Yu. Palyanov1,2*, A.P. Devyaterikov1, N.V. Palyanova2, A.M. Shestopalov21 A.P. Ershov Institute of Informatics Systems of the Siberian Branch of the Russian Academy of Sciences, Novosibirsk, Russia,2 Research Institute of Virology, Federal Research Center of Fundamental and Translational Medicine, Novosibirsk, Russia,
[Sym 04] Big biological data analysis, ontologies and artificial intelligenceGenomis islands characterization using nucleotide repatats in bacterial genomesMitić Nenad S.Malkov S. 1, Stojanović B. 2, Beljanski M.3, Mitić N.S.1*1 Faculty of Mathematics, University of Belgrade, Belgrade, Serbia; 2 Mathematical institute of SASA, Belgrade, Serbia; 3 Institute for General and Physical Chemistry, Belgrade, Serbia
[Sym 04] Big biological data analysis, ontologies and artificial intelligenceJoint Learning-Based Relation Extraction from Scientific Literature for Crop Knowledge Graph ConstructionZheng XiaoyingXiaoying Zhen, Ming Chen*Department of Bioinformatics, College of Life Sciences, Zhejiang University, Hangzhou 310058, China
[Sym 04] Big biological data analysis, ontologies and artificial intelligenceReconfiguration of Gene Networks and the Phenomenon of Adaptive Stabilization of Liver Structures During Resveratrol-Mediated Correction of Stress-Induced and Post-Stress Behavioral Disorders: A Transcriptomic Perspective (Dedicated to the Centenary of F.Z. Meerson)Tseilikman Vadim EduardovichTseilikman V.E.1, Tselikman O.B.1, Shatilov V.A.1, Zhukov M.S.1, Buksha I.A.1, Lipatov I.A.1, Epitashvili A.E.1, Tselikman D-M.V.1, Ermolenko A.A.1, Grabchuk M.A.1, Burlakov E.V.1, Shamshurin M.S.1, Kabilov M.R.3, Zavyalov E.L.2, Khotskina A.S.21 Chelyabinsk State University, Faculty of Fundamental Medicine, Chelyabinsk, Russia; 2 SPF-vivarium, Institute of Cytology and Genetics SB RAS, Novosibirsk, Russia; 3 Institute of Chemical Biology and Fundamental Medicine SB RAS, Novosibirsk, Russia
[Sym 05] Medical, population, and evolutionary genomics/genetics of humansGenome-wide association study of degenerative changes of the human spine in the RuDDS cohortElgaeva Elizaveta E.Zorin E.1,2, Berdnikova A.3, Nostaeva A.1, Tsepilov Y.1,4, Elgaeva E.1,51 Institute of Cytology and Genetics SB RAS, Novosibirsk, Russia; 2 All-Russia Research Institute for Agricultural Microbiology, Saint Petersburg, Russia; 3 Mygenetics, Novosibirsk, Russia; 4 Wellcome Sanger Institute, Cambridge, the UK; 5 Novosibirsk State University, Novosibirsk, Russia
[Sym 05] Medical, population, and evolutionary genomics/genetics of humansQuantitative trait loci in cytokine genes and variability of their serum concentrations in women with uterine leiomyomaDolmatova AnastasiaDolmatova A.A. 1,2*, Konenkov V.I.1, Shevchenko A.V.1, Koroleva E.G.11 Research Institute of Clinical and Experimental Lymphology - Branch of the Institute of Cytology andGenetics, SB RAS, Novosibirsk, Russia; 2 Novosibirsk State University, Novosibirsk, Russia
[Sym 05] Medical, population, and evolutionary genomics/genetics of humansStructural Variability of HAND1, EOMES, BYSL, RBM46 Genes in Mammals with Different Placentation Types: A Bioinformatic StudyDonchenko Ekaterina VitalievnaDonchenko E. 1*, Butenko E.1 Academy of Biology and Medicine, Southern Federal University (SFU), Rostov-on-
[Sym 05] Medical, population, and evolutionary genomics/genetics of humansThe Use of Whole-Genome Sequencing in Diagnosing Trinucleotide Repeat DisordersFonova ElizavetaFonova E.1*, Kafelnikova P.1, Zarubin A.1, Gosudarkina S.1, Zhalsanova I.Zh.1, Skryabin N.11 Research Institute of Medical Genetics, Tomsk National Research Medical Center of the RussianAcademy of Sciences, Tomsk, Russia
[Sym 05] Medical, population, and evolutionary genomics/genetics of humansThe Nenets population as a reference model for paleogenetic research in the ArcticVagaytseva KseniyaK.V. Vagaytseva, I.A. Volkova, N.A. Kolesnikov, L.V. Valikhova, A.V. Bocharova, O.M. Burenkova, O.D. Ruzavina, V.N. Kharkov, V.A. StepanovResearch Institute of Medical Genetics, Tomsk National Research Medical Center of the Russian Academy of Sciences, Tomsk, Russia
[Sym 05] Medical, population, and evolutionary genomics/genetics of humansThe gene pool of the Khakass and Shors according to autosomal SNPs and Y-chromosome haplogroupsKharkov VladimirKharkov V.1*, Khitrinskaya I.1, Zarubin A.1, Stepanov V.11 Research Institute of Medical Genetics, TNMRC, Tomsk, Russia
[Sym 05] Medical, population, and evolutionary genomics/genetics of humansThe role of natural selection in the alternative splicing patterns formation in fetal growth retardationGavrilenko MariaGavrilenko M.M.1*, Trifonova E.A.1, Babovskaya A.A.1, Izhoykina E.V.2, GusarovaA.A.1, Stepanov V.A.11 Research Institute of Medical Genetics, Tomsk National Research Medical Center, Russian Academy of Sciences, Tomsk, Russia; 2 Regional Perinatal Center named after I.D. Evtushenko, Tomsk, Russia
[Sym 05] Medical, population, and evolutionary genomics/genetics of humansRetrotransposons polymorphism in Russian populations.Kanapin AlexanderKanapin A.A.1*, Hirata D. 1, Samsonova A.A.11 Peter the Great Polytechnic University, St. Petersburg, Russia
[Sym 05] Medical, population, and evolutionary genomics/genetics of humansAnalysis of the preeclampsia pathogenetics using systemic approachesTrifonova EkaterinaTrifonova E.A.1*, Babovskaya A.A.1, Gavrilenko M.M.1, Gabidulina T.V.2, Zhilyakova O.V. 2, Zarubin A.A. 1, Svarovskaya M.G. 1, Stepanov V.A. 11 Research Institute of Medical Genetics, Tomsk National Research Medical Center, Russian Academy of Sciences, Tomsk, Russia; 2 Siberian State Medical University, Tomsk, Russia
[Sym 05] Medical, population, and evolutionary genomics/genetics of humansAnalysis of candidate variants in human de novo genes in patients without a confirmed molecular genetic diagnosisKubkin YaroslavKubkin Ya.V.*1, Guseva D.V.1, Beskorovainyi N.S.1, Fomenko S.2, Ryzhkova O.P.1, Borovikov A.O.11 Research Centre for Medical Genetics, Moscow, Russia; 2 Biotech Campus LLC, Moscow, Russia
[Sym 05] Medical, population, and evolutionary genomics/genetics of humansDevelopment of a platform for curation of clinical and molecular genetic data in the Russian national biobank of hereditary diseasesBorovikov ArtemBorovikov A.¹, Murtazina A.¹, Levchenko O.¹, Subbotin D.¹, Vasiliev P.¹, Sharova M.¹, Komarova V.¹, Soloshenko M.¹, Tabakov V.¹, Skoblov M.¹, Sparber P.¹, Kutsev S.¹¹ Research Centre for Medical Genetics, Moscow, Russia
[Sym 05] Medical, population, and evolutionary genomics/genetics of humansIdentification and validation of translation defects in medical genetics: investigating the pathogenic mechanisms of variants in uORFsDan HaritonovHaritonov D.V.1*, Shynkevich Y.V.1, Filatova A.Yu.11 Research Centre for Medical Genetics, Moscow, Russia
[Sym 05] Medical, population, and evolutionary genomics/genetics of humansAutomated Prioritization Algorithm for Secondary Findings in ACMG SF v3.3 GenesBasova AnnaBasova A.¹*, Vizerov T.¹, Borovikov A.¹, Zabudskaya K.¹, Beskorovayny N.¹, Malysheva E.¹, Ryzhkova O.¹1 Research Centre for Medical Genetics, Moscow, Russia
[Sym 05] Medical, population, and evolutionary genomics/genetics of humansY-chromosome diversity of the Turkic peoples of the Volga-Uralregion and the Caucasus: results of whole-genome sequencingDzhaubermezov Murat AlievichEkomasova N.1,2*, Dzhaubermezov M.1,2, Gabidullina L.1, Sufyanova Z.1, KhidiyatovaI.2, Akhmetshin А.2, Karunas A.2, Chekanov N.3, Khusnutdinova E.1,21 Ufa University of Science and Technology, Ufa, Russia; 2 Institute of Biochemistry and Genetics - Subdivision of the Ufa Federal Research Centre of the RussianAcademy of Sciences, Ufa, Russia; 3 Biotech Campus LLC, Moscow, Russia
[Sym 05] Medical, population, and evolutionary genomics/genetics of humansEthnogenetic Patterns of Rare Disease Carrier Status in the CaucasusFomenko Sergei SergeevichFomenko S.1*, Zaimenko A.1, Dzhaubermezov M.2,3, Khusnutdinova E.2,3,Suvorova Y.11 Biotek Campus LLC, Moscow, Russia; 2 Institute of Biochemistry and Genetics of Ufa Scientific Centre, Ufa, Russia; 3 Ufa University of Science and Technology, Ufa, Russia
[Sym 06] Fundamental questions in evolutionary systems biology: from genes and gene networks to populations and ecosystemsEvolutionary transcriptomics of cancer developmentIvanov Roman ArtemovichIvanov R.A. 1*, Afonnikov D.A. 1,2, Matushkin Y.G..1, Lashin S.A.1,21 Institute of Cytology and Genetics, SB RAS, Novosibirsk, Russia; 2 Novosibirsk State University, Novosibirsk, Russia
[Sym 06] Fundamental questions in evolutionary systems biology: from genes and gene networks to populations and ecosystemsVariational autoencoder based on transformer architecture for population structure analysis.Tatiana Nikolaeva AndreevnaNikolaeva T.*, Sherbakov D.Limnological Institute of the Siberian Branch of the Russian Academy of Sciences, Irkutsk, Russia
[Sym 06] Fundamental questions in evolutionary systems biology: from genes and gene networks to populations and ecosystemsCandidate SNP markers for alteration of human SCN9A gene expressionas an integrator of pain generation, perception, response and anesthesiaDotsenko PolinaDotsenko P.A.1,2,3*, Zolotareva K.A.1, Ivanov R.A.1, Chadaeva I.V.1,3, Podkolodnyy N.L.1,4,Ivanisenko V.A.1,2,3, Demenkov P.S.1, Lashin S.A.1,2, Ponomarenko M.P.1,31 Institute of Cytology and Genetics SB RAS, Novosibirsk, Russia; 2 Novosibirsk State University, Novosibirsk, Russia; 3 Kurchatov Genomic Center of ICG SB RAS, Novosibirsk, Russia; 4 Institute of Computational Mathematics and Mathematical Geophysics SB RAS, Novosibirsk, Russia
[Sym 06] Fundamental questions in evolutionary systems biology: from genes and gene networks to populations and ecosystemsOrigin and evolution of the Esf2/ABP1 family of genes in DrosophylidaeDavydova Elizaveta DenisovnaElizaveta D. Davydova 1, †, Alexei A. Kotov 1, †, Ekaterina Yu Yakovleva 1 and LudmilaV. Olenina 11 Koltzov Institute of Developmental Biology, Russian Academy of Sciences, Moscow, Russia
[Sym 06] Fundamental questions in evolutionary systems biology: from genes and gene networks to populations and ecosystemsDiversity of ATP synthases and their homologs in genomes, including ultrasmall nanobacteria from the CPR groupDibrova DariaDibrova D.V.1,2*, Mulkidjanian A.Y.1,21 Belozersky Institute of Physico-Chemical Biology, Lomonosov Moscow State University, Moscow, Russia; 2 School of Bioengineering and Bioinformatics, Lomonosov Moscow State University, Moscow, Russia
[Sym 06] Fundamental questions in evolutionary systems biology: from genes and gene networks to populations and ecosystemsReconstruction of the phylogeny and molecular clock of Erysipelothrix rhusiopathiae based on ancient genomesIvanova AleksandraAlexandra O. Ivanova1,2,3, Natalia Y. Berezina3, Andrey A. Kritsky2,3, Egor I.Botsmanov2, Alla A. Perevozchikova3, Tatiana R. Tsedilina1, Evgeny I. Klimuk2, Alexandra P. Buzhilova3, Konstantin V. Severinov21 Institute of Bioorganic Chemistry of the Russian Academy of Science; 2 Biotechnology Campus LLC; 3 Anuchin Research Institute and Museum of Anthropology, Moscow, Russia
[Sym 06] Fundamental questions in evolutionary systems biology: from genes and gene networks to populations and ecosystemsUnobvious consequences of non-selective equilibrium harvestingon the evolution of populationZhdanova Oksana L.Zhdanova O.1*, Frisman E.21 Institute for Automation and Control Processes, FEB RAS, Vladivostok, Russia; 2 Institute for Complex Analysis of Regional Problems, FEB, RAS, Birobidzhan, Russia
[Sym 06] Fundamental questions in evolutionary systems biology: from genes and gene networks to populations and ecosystemsInteractive Individual-Oriented Platform with a Graphical Interface for Forward Modeling of Microsatellite Population DynamicsPoroshina Anastasiya AndreevnaPoroshina A.A. 1*, Sherbakov D.Yu 11 Limnological Institute, Siberian Branch of the Russian Academy of Sciences, Irkutsk, Russia
[Sym 06] Fundamental questions in evolutionary systems biology: from genes and gene networks to populations and ecosystemsNiche conservatism or diversification: climatic niches of the genus Orthops (Insecta: Miridae: Mirinae) in a phylogenetic contextDzhelali PolinaDzhelali P.A.1,2*, Namyatova A.A.1,21 Zoological Institute of the Russian Academy of Sciences, Saint Petersburg, Russia; 2 All-Russian Institute of Plant Protection, Pushkin, Saint Petersburg, Russia
[Sym 06] Fundamental questions in evolutionary systems biology: from genes and gene networks to populations and ecosystemsMathematical models integrating ecological and genetic approaches in population biologyFrisman EfimFrisman E.1*, Kulakov M.1, Neverova G.1,2, Zhdanova O.1,21 Institute for Complex Analysis of Regional Problems, FEB, RAS, Birobidzhan, Russia; 2 Institute for Automation and Control Processes, FEB RAS, Vladivostok, Russia
[Sym 06] Fundamental questions in evolutionary systems biology: from genes and gene networks to populations and ecosystemsEvolutionary Analysis of Opsin Diversity in CtenophoresKuleshova Olga NikolaevnnaKuleshova O.N.¹*, Bayandina Y.S.¹, Krivenko O.V.¹1 A.O. Kovalevsky Institute of Southern Seas Biology, Russian Academy of Sciences, Sevastopol, Russia
[Sym 06] Fundamental questions in evolutionary systems biology: from genes and gene networks to populations and ecosystemsFrom Epigenetics to Evolution: The Impact of AT-chX piRNAs on the Evolutionary Rate of the vasa Gene in the Drosophila melanogaster GenomeKotov AlexeiKotov A.A.1*, Yakovleva E.Y.1, Olenina L.V.11 Koltzov Institute of Developmental Biology, Russian Academy of Sciences, Moscow, Russia
[Sym 06] Fundamental questions in evolutionary systems biology: from genes and gene networks to populations and ecosystemsExperimental and Computational Approaches to Studies of Ecology and Evolution of Baikal InvertebratesSherbakov DmitrySherbakov D. Yu.1,2, *1 Limnological Institute, Siberian Branch of the Russian Academy of Sciences, Irkutsk, 2 NovosibirskState University, Novosibirsk
[Sym 07] Plant genomics, genetics and systems biologyReconstruction and Computational Analysis of the microRNA Regulatory Gene Network in Mechanisms of Wheat Drought ResponseKleshchev Maxim A.Kleschev M.1*, Maltseva A.1,3, Antropova E.1, Demenkov P.1,2,3, Ivanisenko T.1,2,3, Orlov Yu.1,4,5, Haoyu Chao6, Ming Chen6, Kolchanov N.1,2,3, Ivanisenko V.1,2,31 Institute of Cytology and Genetics of the Siberian Branch of the Russian Academy of Sciences, Novosibirsk, Russia; 2 Kurchatov Genome Center of the Institute of Cytology and Genetics of the Siberian Branch of theRussian Academy of Sciences, Novosibirsk, Russia; 3 Novosibirsk State University, Novosibirsk, Russia; 4 Agrarian and Technological Institute, Peoples' Friendship University of Russia, Moscow 117198, Russia; 5 The Digital Health Center, I.M. Sechenov First Moscow State Medical University of the Russian Ministryof Health (Sechenov University), Moscow 119991, Russia; 6 Department of Bioinformatics, College of Life Sciences, Zhejiang University, Hangzhou 310058, China
[Sym 07] Plant genomics, genetics and systems biologyIdentification and validation of stable loci underlying productivity traits in common wheatKiseleva AntoninaKiseleva A.A.1,2*, Leonova I.N.1, Nesterov M.A. 1, Piskarev V.V.3, Salina E.A. 1,21 Institute of Cytology and Genetics SB RAS, Novosibirsk, Russia; 2 Kurchatov Genomic Center, Institute of Cytology and Genetics SB RAS, Novosibirsk, Russia; 3 Siberian Research Institute of Crop Production and Breeding, Siberian Branch of Russian Academy of Sciences, Novosibirsk, Russia
[Sym 07] Plant genomics, genetics and systems biologyPlantReg 1.1: the reconstruction of links between transcription factor regulatory networks and biological processes under their controlLavrekha Viktoriya VadimovnaLavrekha V.V.1*, Omelyanchuk N.A. 1, Bogomolov A.G. 1, Zemlyanskaya E.V.1,21 Institute of Cytology and Genetics, SB RAS, Novosibirsk, Russia; 2 Novosibirsk State University, Novosibirsk, Russia
[Sym 07] Plant genomics, genetics and systems biologyCas9 Endonuclease-Mediated Knockout of the GAME9 Gene Reduces Steroidal Glycoalkaloids Accumulation in PotatoEgorova AnastasiyaEgorova A.1,2*, Kostina N.1,2, Kotsuba V.3, Hoffie I. 4, Hertig C. 4, Hiekel S. 4, Kumlehn J. 4, Gerasimova S.1, Kochetov A.1,21 Institute of Cytology and Genetics, SB RAS, Novosibirsk, Russia; 2 Kurchatov Genomic Center of the Institute of Cytology and Genetics, SB RAS, Novosibirsk, Russia; 3 Federal Research Centre “Fundamentals of Biotechnology” RAS, Moscow, Russia; 4 IPK Gatersleben, Seeland, Germany
[Sym 07] Plant genomics, genetics and systems biologyDifferent evolutionary pathways of centromeric DNA in Triticeae speciesVershinin Alexander VasilievichElisafenko E.A.1,2, Evtushenko E.V.2, Vershinin A.V.2*1 Institute of Cytology and Genetics SB RAS, Novosibirsk, Russia; 2 Institute of Molecular and Cellular Biology SB RAS, Novosibirsk, Russia
[Sym 07] Plant genomics, genetics and systems biologyMathematical modeling of the effect of exogenous auxin on cellular dynamics in the root meristem of Arabidopsis thaliana L.Azarova Daria SergeevnaAzarova D.S.1, V.A. Cherenko1, Zemlyanskaya E.V.1,2, Lavrekha V.V.1*1 Department of Systems Biology, Institute of Cytology and Genetics, Siberian Branch of the Russian Academy of Sciences, Novosibirsk, Russia; 2 Department of Natural Sciences, Novosibirsk State University, Novosibirsk, Russia
[Sym 07] Plant genomics, genetics and systems biologyBinding site variants of the transcription factor ETHYLENE-INSENSITIVE3 mediate divergent regulation of gene expression by ethylene in Arabidopsis thaliana L.Maslakova Angelina AleksandrovnaMaslakova A.A.1, Dolgikh V.A.1,2, Zemlyanskaya E.V.1,2 *1 Institute of Cytology and Genetics, SB RAS, Novosibirsk, Russia; 2 Novosibirsk State University, Novosibirsk, Russia
[Sym 07] Plant genomics, genetics and systems biologyMachine learning-guided comparative transcriptomics revealsabiotic stress-responsive regulatory signatures in wheat and riceWang ZixuanZixuan Wang, Zhouxuan Ge, Ming Chen*Department of Bioinformatics, College of Life Sciences, Zhejiang University, Hangzhou 310058, China
[Sym 07] Plant genomics, genetics and systems biologyWheat genome sequencing as a trigger of research on discovery and editing genes for agronomic traitsSalina Elena A.Salina E.A.1,21 Institute of Cytology and Genetics SB RAS, Novosibirsk, Russia; 2 Kurchatov Genomic Center, Institute of Cytology and Genetics SB RAS, Novosibirsk, Russia
[Sym 07] Plant genomics, genetics and systems biologyTranscriptomic data on multi-cycle stress effects on plants as a tool for searching for marker genes of stress memoryShchennikova Анна ВладимировнаShchennikova A.V.1*, Filyushin M.A.1, Kochieva E.Z.11 Federal Center of Biotechnology, RAS, Moscow, Russia
[Sym 07] Plant genomics, genetics and systems biologyMulti-omics approach as a tool for studying the symbiotic effectiveness of garden peaGordon MikhailZhukov V.A.1,2, Gordon M.L.1,2*, Zhernakov A.I.1, Zorin E.A.1, Sulima A.S.1, Romanyuk D.A.1, Kichigina N.E.1, Kulaeva O.A.1, Akhtemova G.A.1, TikhonovichI.A.11 Federal State Budget Scientific Institution "All-Russia Research Institute for Agricultural Microbiology", St. Petersburg, Russia; 2 Federal Research Center "N. I. Vavilov All-Russian Institute of Plant Genetic Resources (VIR)", St.Petersburg, Russia
[Sym 07] Plant genomics, genetics and systems biologyRole of the flax mobilome in the formation of agronomically valuable traitsSamsonova Maria GeorgievnaDuk M.A..2, Stanin V. 1, Kanapin A.A. 1, Hirata D. 1, Samsonova M.G.1 *1 Peter the Great St.Petersburg Polytechnic University, St.Perersburg, Russian Federation; 2 Ioffe Institute, Saint Petersburg, Russian Federation
[Sym 07] Plant genomics, genetics and systems biologyMedicago lupulina as a Genetic Model for Studying the Influence of Mycorrhization on the Metabolome and Transcriptome of the Host PlantYurkov Andrey PavlovichYurkov A.1*, Kryukov A.1, Vavulina T.1, Kosulnikov Yu.1, Kosulnikova A.1, BelyaevaA.1, Puzanskiy R.2, Shishova M.31 All-Russia Research Institute for Agricultural Microbiology, St. Petersburg, Russia; 2 Komarov Botanical Institute of the Russian Academy of Sciences, St. Petersburg, Russia; 3 St. Petersburg State University, St. Petersburg, Russia
[Sym 07] Plant genomics, genetics and systems biologyGenomic analysis of an Oryza sativa L. collection for the development of a genomic selection system for agronomically valuable traitsGrigoreva Elena IgorevnaGrigorieva E.I.1 *, Erofeeva N.O., Ogly A.M.2, Esaulova L.V.2, Korotenko T.L.2, Bruskin S.A.1, Konstantinov D.K.1, Medvedev D.O.11 PLASTILIN Ltd., Moscow, Russia; 2 Federal state budgetary scientific institution "Federal Scientific Rice Centre", Krasnodar, Russia
[Sym 07] Plant genomics, genetics and systems biologyDevelopment of digital phenotyping methods for individual plants based on soybean structural analysisSapozhnikov NikitaSapozhnikov N.A.1*, Novikov D.I.1, Grigorieva E.I.1, Konstantinov D.K.1, MedvedevD.O.11 Plastilin LLC, bldg. 1, 42 Bolshoy Boulevard, Moscow, 121205, Russia
[Sym 07] Plant genomics, genetics and systems biologyComparative analysis of homostyle lines of common buck wheat(Fagopyrum esculentum)Prokopchuk Sofia RomanovnaProkopchuk S.1,2*, Logacheva M.1,2, Schelkunov M.1,2, Penin A.2, Fesenko A.2,3,Fesenko I.2,31 Center for Molecular and Cellular Biology, Skolkovo Institute of Science and Technology, Moscow, Russia; 2 Vavilov Institute of General Genetics, Moscow, Russia; 3 Breeding Centre, Laboratory of Buckwheat Breeding, Federal State Budgetary Scientific Institution“Federal Scientific Center of Legumes and Groat Crops”, Orel, Russia
[Sym 07] Plant genomics, genetics and systems biologyGene gain and loss: Uncovering pathogenicity in the pan-genome of Fusarium oxysporum f.sp. liniSenko AlisaSenko A.A.1*, Stanin V.A.1,3, Kanapin A.A.1, Samsonova A.A.1, Rozhmina T.A.2, Samsonova M.G.3*1 Centre for Computational Biology, Peter the Great St. Petersburg Polytechnic University, St. Petersburg, Russia; 2 Laboratory of Breeding Technologies, Federal Research Center for Bast Fiber Crops, Torzhok, Russia; 3 Mathematical Biology & Bioinformatics Lab, Peter the Great St. Petersburg Polytechnic University, St.Petersburg, Russia
[Sym 07] Plant genomics, genetics and systems biologyIdentification of loci associated with soybean flowering using genome-wide association study under the conditions of humid subtropics of the Russian FederationMenkov MikhailMenkov M. *¹, ², Rozanova I.1, Igoshin A.³, Bogush D.¹, Ermakova P.¹, KhlestkinaE.¹, ²1 Sirius University of Science and Technology, Research Center of Genetics and Life, Krasnodar Territory, Russia; 2 Federal Research Center All-Russian Institute of Plant Genetic Resources named after N.I. Vavilov, Saint Petersburg, Russia; 3 Institute of Cytology and Genetics of Siberian Branch of the Russian Academy of Sciences, Novosibirsk, Russia
[Sym 07] Plant genomics, genetics and systems biologyChanges in the lipidome during the development of autotrophicand mixotrophic batch cultures of Chlamydomonas reinhardtiiPuzanskiy Roman KonstantinovichBogdanova E.M.1, Senik S.V.1, Kolova E.R.1, Puzanskiy R.K.1*1 Komarov Botanical Institute of the Russian Academy of Sciences (BIN RAS), St. Petersburg, Russia
[Sym 07] Plant genomics, genetics and systems biologyDevelopment of AI tools in plant biology on example of the SmartCrop platformOrlov Yuriy LOrlov Y.L. 1,2,3*, Ivanisenko V.A. 3,4, Chen M. 51 I.M.Sechenov First Moscow State Medical University (Sechenov University), Moscow, Russia; 2 Patrice Lumumba Peoples’ Friendship University, Moscow, Russia; 3 Novosibirsk State University, Novosibirsk, Russia; 4 Institute of Cytology and Genetics SB RAS, Novosibirsk, Russia; 5 Zhejiang University, Hangzhou, Russia
[Sym 07] Plant genomics, genetics and systems biologyCellulose synthesis inhibition in Arabidopsis thaliana hypocotylsis accompanied by complex changes in the lipid profile of endomembranes and plasma membraneSuslov Dmitry VladimirovichKotlova E.1, Senik S.1, Puzanskiy R.1, Pozhvanov G.1,2, Rodina O.1, Bogdanova E.1, Manzhieva B.1, Frolova D.3, Manova A.3, Suslov D.1,3*1 Komarov Botanical Institute, RAS, St. Petersburg, Russia; 2 Herzen State Pedagogical University, St. Petersburg, Russia; 3 St. Petersburg State University, St. Petersburg, Russia
[Sym 07] Plant genomics, genetics and systems biologyCRISPR/Cas9-engineered thermo sensitive genic male sterility: apath to hybrid wheat breedingShafi AjazAjaz Shafi1*, E. Potokina1,1 Skolkovo Institute of Science and Technology, Moscow, Russia
[Sym 07] Plant genomics, genetics and systems biologyElucidating the Molecular Mechanisms of Abiotic Stress Responses in Rice and Wheat through Integrated Clusteringand WGCNAGe ZhouxuanZhouxuan Ge1, Zixuan Wang1, Ming Chen*21 Department of Bioinformatics, College of Life Sciences, Zhejiang University, Hangzhou 310058, China
[Sym 07] Plant genomics, genetics and systems biologyMining and Pyramiding the novel blast-resistant genes without yield penalty into elite rice cultivarsHe HuaqinGuanpeng Huang1, Shiwei Ma 1,2, Changqing Feng1, Guofeng Wu1, Jiayi Guo1, Shuhong Wu1, Shoukai Lin2, Li Zhang1, Peitin Hu1, Wanyi Liu1, Yajing Zheng1, Samuel Tareke Woldegiorgis1, Yufang Ai1, Lina Zhang1, Wei Liu1, Huaqin He11 College of Life Sciences, Fujian Agriculture and Forestry University, Fuzhou 350002, China; 2 College of Environmental and Biological Engineering, Putian University, Putian, 351100, China.
[Sym 07] Plant genomics, genetics and systems biologyThe possible mechanism of drought resistance in grapevine cultivars revealed by RNA-seqVodiasova EkaterinaVodiasova E.1,2*, Gavrilenko I.1, Uppe V.1,2, Maletich G.1, Pronozin A.1,3, Khvatkov P.11 Federal State Funded Institution of Science "The Labor Red Banner Order Nikita Botanical Gardens - National Scientific Center of the RAS", Yalta, Russia; 2 A.O. Kovalevsky Institute of Biology of the Southern Seas of RAS, Sevastopol, Russia; 3 Institute of Cytology and Genetics, Siberian Branch of the Russian Academy of Sciences, Novosibirsk, Russia
[Sym 08] 1. Genomics, genetics, and systems biology of laboratory animals and genetic models of human diseasesAUTOPHAGY GENES TRANSCRIPTION AND ULTRASTRUCTURE CHANGES IN BRAIN CELLS OF MICE IN AGEING AND NEURODEGENERATION DEVELOPMENTKorolenko Tatiana AleksandrovnaT.A. Korolenko 1, A.B. Pupyshev 1, V.M. Belichenko 1, N.P. Bgatova 2, E.L. Zavjalov 3, M.A. Tikhonova 11. Scientific Research Institute of Neurosciences and Medicine, Novosibirsk, Russia; 2. Institute of clinical and experimental Lymphology, Filial of Institute of Cytology and Genetics, Siberian Branch of Russian Academy of Sciences, Novosibirsk, Russia; 3.Institute of Cytology and Genetics, Siberian Branch of Russian Academy of Sciences, Novosibirsk, Russia
[Sym 08] 1. Genomics, genetics, and systems biology of laboratory animals and genetic models of human diseasesThe cerebral dopamine neurotrophic factor CDNF in the regulation of behavior and the central nervous system functioningNaumenko VladimirNaumenko V.S.1, Eremin D.V.1, Kaminskaya Ya.P.1, Ilchibaeva T.V.1, Mishchenko T.A.2, Vedunova M.V.2, Tsybko A.S.11 Russia, Novosibirsk, Federal Research Center Institute of Cytology and Genetics SB RAS; 2 Russia, Nizhny Novgorod, Institute of Biology and Biomedicine, Lobachevsky State University of Nizhni Novgorod
[Sym 08] 1. Genomics, genetics, and systems biology of laboratory animals and genetic models of human diseasesThe effect of Tnf gene knockout on brain neuroplasticity following acute administration of bacterial lipopolysaccharideAdonina Svetlana NikolayevnaS.N. Adonina*1, A.K. Skotnikova1, U.S. Ustinova1, V.S. Moskaluk1, D.V. Bazovkina11 Institute of Cytology and Genetics, SB RAS, Novosibirsk, Russia
[Sym 08] 1. Genomics, genetics, and systems biology of laboratory animals and genetic models of human diseasesThe Effect of Lecithin Intake on Synaptic Ultrastructure and Neuromediation in C57BL/6 Mice Brain CellsMorozova Ksenia NikolaevnaMorozova K.N.1,2, Suldina L.A.1, Voronova I.P.3, Evtushenko A.A.2,3, Kiseleva E.V.1, Boldyreva L.V.31 Institute of Cytology and Genetics, Siberian Branch of the Russian Academy of Sciences, Novosibirsk, Russia; 2 Novosibirsk State University, Novosibirsk, Russia; 3 Research Institute of Neuroscience and Medicine, Novosibirsk, Russia
[Sym 08] 1. Genomics, genetics, and systems biology of laboratory animals and genetic models of human diseasesSex differences in liver gene expression depending on the obesity model in miceBalybina NataliaBalybina N.1, Yakovleva T.1, Kazantseva A.1, Makarova N.1, Bazhan N.11 Institute of Cytology and Genetics, SB RAS, Novosibirsk, Russia
[Sym 08] 1. Genomics, genetics, and systems biology of laboratory animals and genetic models of human diseasesVortioxetine complex with glycyrrhizic acid: overcoming glucocorticoid resistance and modulation of the inflammatory reponseBondar NataliaBondar N.P.1, Khantakova J.N.1, Meteleva E.S.1,2, Ryabushkina Y.A.2, Polaykov N.E.2,3, Degtyareva A.O.1, Salman R.1, Dushkin A.V.21 Institute of Cytology and Genetics, SB RAS, Novosibirsk, Russia; 2 Institute of Solid State Chemistry and Mechanochemistry, SB RAS, Novosibirsk, Russia; 3 Institute of Chemical Kinetics and Combustion, SB RAS, Novosibirsk. Russia
[Sym 08] 1. Genomics, genetics, and systems biology of laboratory animals and genetic models of human diseasesSearch for rare genetic variants that cause mitochondrial dysfunction in patients with Parkinson's diseaseSafonova AlyonaSafonova A.A.1,2, Malakhova A.A.1, Medvedev S.P.1,3, Zakian S.M.1,31 Institute of Cytology and Genetics, SB RAS, Novosibirsk, Russia; 2 Novosibirsk State University, Novosibirsk, Russia; 3 Surgut State University, Surgut, Russia
[Sym 08] 1. Genomics, genetics, and systems biology of laboratory animals and genetic models of human diseasesA new experimental model for the study of human neurodegenerative diseases: Drosophila funebris strain that is sensitive to shakingMukha Dmitry V.Kosherova K.A.1, Mukha D.V.11 Vavilov Institute of General Genetics Russian Academy of Sciences, Moscow, Russia
[Sym 08] 1. Genomics, genetics, and systems biology of laboratory animals and genetic models of human diseasesEvaluation of neuroprotective properties of glucocerebrosidase activity modulators in mouse models of parkinsonismPchelina Sofya NPchelina S.N.1,2, Emelyanov A.K. 1,2, Lavrinova A.O. 1,2, Kopytova A.E. 1,2, Pidy-urchina V.N. 1, Artynyuk A. 1, Baydakova G.V.3, Rudenok М.М4., Nesterov М.S.5, Abaimov D.А.6, Slominsky P.А.4, Zakharova Е.Yu.3, Konevega А.L.11 Petersburg Nuclear Physics Institute, Kurchatov Institute National Research Center, Gatchina, Rus-sia; 2 Pavlov First Saint Petersburg State Medical University, Saint Petersburg, Russia; 3 Research Center of Medical Genetics, Moscow, Russia; 4 Institute of Molecular Genetics, Kurchatov Institute National Research Centre, Moscow, Russia; 5 Scientific Center of Biomedical Technologies, Federal Medical and Biological Agency of Russia, Moscow, Russia; 6 Research Centre of Neurology, Moscow, Russia.
[Sym 08] 1. Genomics, genetics, and systems biology of laboratory animals and genetic models of human diseasesSocial Buffering of Stress in Rats as a Multisystem Model of Protective Functions and Phenotypic Diversity of Stress ResilienceSarapultsev Alexey PKomelkova M.V.1,2, Naumenko V.S.3, Sarapultsev A.P.1,21 Russian-Chinese Education and Research Center of System Pathology, South Ural State University, Chelyabinsk, Russia; 2 Institute of Immunology and Physiology, UB RAS, Ekaterinburg, Russia; 3 Institute of Cytology and Genetics, SB RAS, Novosibirsk, Russia
[Sym 08] 1. Genomics, genetics, and systems biology of laboratory animals and genetic models of human diseasesPhenotyping Architecture of Inflammation in Larval Zebrafish (Danio rerio) for Small-Molecule Triage: Reporter Bias and Limits of InterpretationSarapultsev Alexey PKalueff A.V.1,2, Sarapultsev A.P.3,4, Komelkova M.V3,41 School of Science, Xian Jiaotong-Liverpool University, Suzhou, China; 2 St. Petersburg State University, St. Petersburg. Russia; 3 South Ural State University, Chelyabinsk, Russia; 4 Institute of Immunology and Physiology, UB of RAS, Ekaterinburg
[Sym 08] 1. Genomics, genetics, and systems biology of laboratory animals and genetic models of human diseasesThe role of hypoxia-inducible factor (HIF) in the development of neurodegenerative processesMitroshina Elena VladimirovnaMitroshina E.V.1, Strelkova P.L.1, Klimenko M.O.1, Bredikhina T.D.1, Vedunova M.V.11 National Research Lobachevsky State University of Nizhny Novgorod, Nizhny Novgorod, Russia
[Sym 08] 1. Genomics, genetics, and systems biology of laboratory animals and genetic models of human diseasesCross-Species Integrative Genomic Analysis Identifies Male-Specific Regulatory Determinants of Skeletal Muscle HypertrophyMukhametshina AlbinaMukhametshina A.¹, Mukhametshina R.¹, Sultanov R.I.2, Zhelankin A.V.2, Kulemin N.A.2, Generozov E.V.2, Ahmetov I.I. 21 Lomonosov Moscow State University, Moscow, Russia; 2 Lopukhin Federal Research and Clinical Center of Physical-Chemical Medicine of Federal Medical Biological Agency, Moscow, Russia; 3 Kazan State Medical University, Kazan, Russia
[Sym 08] 1. Genomics, genetics, and systems biology of laboratory animals and genetic models of human diseasesInvestigating the impact of the pathogenic MEFV c.2080A>G variant on molecular processes in cellular models of familial Mediterranean fever.Shubkin Andrei VyacheslavovichShubkin A.V.1,2, Nikitin E.R.1,2, Karapetyan L.V.3, Atshemyan S.A.3,4, Pavlova S.V. 2, Medvedev S.P.2, Zakian S.M.21 Novosibirsk State University, Novosibirsk, Russia; 2 Institute of Cytology and Genetics, SB RAS, Novosibirsk, Russia; 3 Institute of Biomedicine and Pharmacy, RAU, Yerevan, Armenia; 4 Institute of Molecular Biology, NAS RA, Yerevan, Armenia
[Sym 08] 1. Genomics, genetics, and systems biology of laboratory animals and genetic models of human diseasesGeneration, characterization and application of a novel mouse model of Hemophilia BSokolova OlesyaSokolova O.1, Andriianov V.1, Malyutina A.1, Leonova E.1, Reshetnikov V.11 Sirius University of Science and Technology, Sochi, Russia
[Sym 08] 1. Genomics, genetics, and systems biology of laboratory animals and genetic models of human diseasesMulti-modal transcriptomic profiling of adrenal gland of Acomys cahirinusBydanov Andrey StanislavovichBydanov A.1, Bilyalov A.2,3, Voronina T.1,3, D. Maksimov4, Gazizova G.1, Shagimardanova E.3,5, Gusev O3,6, Kozlova O.11 Regulatory Genomics Research Center, Institute of Fundamental Medicine and Biology, Kazan Federal University, Kazan, Russia; 2 Loginov Moscow Clinical Scientific Center, 111123 Moscow, 111123 Moscow, Russia; 3 Life Improvement by Future Technologies (LIFT) Center, 121205 Moscow, Russia; 4 Lomonosov Moscow State University, Moscow, Russia; 5 Genomics and bioimaging Core Facility, Skolkovo Institute of Science and Technology, 143026 Moscow, Russia; 6 Graduate School of Medicine, Juntendo University, Tokyo, Japan
[Sym 08] 1. Genomics, genetics, and systems biology of laboratory animals and genetic models of human diseasesBridging science and medicine: novel mouse genetic models for studying human psychiatric and cognitive pathologiesKaragyaur MaximKaragyaur M.N.1, Averina O.A.2, Bozov K.D.1, Dzhauari S.S.1, Priymak A.V.1,2, Khaybullina R.T.1, Permyakov O.A.2, Popov V.S.1, Grigorieva O.O.2, Illarionova M.E.1, Shkarina L.N.1, Primak A.L.1, Andreev A.I.3, Semina E.V.1, Klimovich P.S.1, Samokhodskaya L.M.1, Sergiev P.V.2, Neyfeld E.A.1, Tsygankov B.D.4, Tkachuk V.A.11 Medical Research and Educational Institute, Lomonosov Moscow State University, Moscow, Russia; 2 A.N. Belozersky Institute of Physico-Chemical Biology, Lomonosov Moscow State University, Mos-cow, Russia; 3 Perm State National Research University, Perm, Russia; 4 Russian University of Medicine of the Ministry of Healthcare of the Russian Federation, Moscow, Russia
[Sym 08] 1. Genomics, genetics, and systems biology of laboratory animals and genetic models of human diseasesUneven distribution of piRNAs of different occurrence as one of the factors of their tissue specificityKuzmichev Sergey AlexandrovichKuzmichev S.A., 1, Tchevkina E.M. 11 Rsearch Institute of Experimental Oncology and Carcinogenesis, Research Institute of Carcinogenesis, N.N. Blokhin National Medical Research Center of Oncology, Moscow, Russia
[Sym 08] 1. Genomics, genetics, and systems biology of laboratory animals and genetic models of human diseasesGut Microbiome as a Factor in NeurodegenerationSlepneva Elizaveta EduardovnaSlepneva E.¹, Komissarov A.¹, Stulov A.¹, Bulat S.¹, Saratceva S.¹1 B.P. Konstantinov Petersburg Nuclear Physics Institute, NRC «Kurchatov Institute», Gatchina, Russia
[Sym 08] 2. Population and evolutionary genetics/genomics of wild and domestic animals and genetic models of experimental domesticationBridging the parasite-mediated domestication hypothesis (PMD) and the Novosibirsk farm fox and mink domestication experimentsSkok JankoSkok Janko 11 Department of Animal Science, Faculty of Agriculture and Life Sciences, University of Maribor, Maribor, Slovenia
[Sym 08] 2. Population and evolutionary genetics/genomics of wild and domestic animals and genetic models of experimental domesticationRat strain prone to appearance of cardiac arrhythmiaMarkel Arcady LvovichMarkel A.1, Moreva T. 11 Institute of Cytology and Genetics, SB RAS, Novosibirsk, Russia
[Sym 08] 2. Population and evolutionary genetics/genomics of wild and domestic animals and genetic models of experimental domesticationParental effect in the formation of a memory and chromosomal rearrangements in DrosophilaNikitina Ekaterina AleksandrovnaNikitina E.1,2, Vasilyeva S.2, Zhuravlev A.1, Zalomaeva E.1,2, Medvedeva A.11 Pavlov Institute of Physiology, Russian Academy of Sciences, Saint-Petersburg, Russia; 2 Herzen State Pedagogical University of Russia, Saint-Petersburg, Russia
[Sym 08] 2. Population and evolutionary genetics/genomics of wild and domestic animals and genetic models of experimental domesticationComparative Transcriptome Analysis of Two Brain Regions, Molecular, Cellular, and Behavioral Characteristics of Rats with Contrasting Nervous System ExcitabilityDyuzhikova NataliaDyuzhikova N.1, Pavlova M. 1, Shalaginova I.11 Pavlov Institute of Physiology, Russian Academy of Sciences, Saint-Petersburg, Russia
[Sym 08] 2. Population and evolutionary genetics/genomics of wild and domestic animals and genetic models of experimental domesticationDangerous mitochondria: how birds ecology drives mitochondrial DNA mutational spectrumGusarov Yury SergeevichGusarov Y.1, Mikhailova A.1, Efimenko B.1, Voronca A.1, Gunbin K.1, Bushuev A.2, Burskaya V.3,4, Popadin K.11 Center of the Genomic Researches, Higher School of Living Systems, Institute of Medicine and Life Science, Immanuel Kant Baltic Federal University, Kaliningrad, Russia; 2 Lomonosov Moscow State University, Moscow, Russia; 3 University of Antwerp, Antwerp, Belgium; 4 Plant Systems Biology Center VIB - Ugent, Gent, Belgium
[Sym 08] 2. Population and evolutionary genetics/genomics of wild and domestic animals and genetic models of experimental domesticationGenetic Analysis of Modern Polar Bear Populations in the Russian ArcticDaisuke HirataHirata D.1, Boltunov A.N.2, Kanapin A.A.1, Samsonova A.A.11 Centre for Computational Biology, Peter the Great Saint Petersburg Polytechnic University, St. Pe-tersburg 195251, Russia; 2 Marine Mammals Research and Expedition Center, LLC, Moscow 117997, Russia
[Sym 08] 2. Population and evolutionary genetics/genomics of wild and domestic animals and genetic models of experimental domesticationExtrapolation task performance peculiarities of domesticated and non selected juvenile foxes (3,5 - 4 months).Mukhamedschina Irina AndreevnaMukhamedshina I.1, Besogonova K. 2, Klyuchereva A.1, Morsakova K.2, Kharlamova A.11 Institute of Cytology and Genetics, SB RAS (IC&G SB RAS), Novosibirsk, Russia; 2 Perm State National Research University, Perm, Russia
[Sym 08] 2. Population and evolutionary genetics/genomics of wild and domestic animals and genetic models of experimental domesticationThe modified open field test behavioral responses of silver foxes from different breeding directions: domesticated, unselected, and selected for aggression toward humansBesogonova Kseniya АлександровнаBesogonova K, 1, Morsakova E.1, Mukhamedshina I.2, Kostitsyna N.1, Kharlamova A.21 Perm State National Research University, Perm, Russia; 2 Institute of Cytology and Genetics, SB RAS, Novosibirsk, Russia
[Sym 08] 2. Population and evolutionary genetics/genomics of wild and domestic animals and genetic models of experimental domesticationComparative analysis of BoLA-DRB3.2 polymorphism in worldwide Holstein and Russian commercial and indigenous cattle breedsLazebnaya Irina ViktorovnaLazebnaya I.1, Lazebny O.21 Vavilov Institute of General Genetics, Russian Academy of Sciences, Moscow, Russia; 2 Koltzov Institute of Developmental Biology, Russian Academy of Sciences, Moscow, Russia
[Sym 08] 2. Population and evolutionary genetics/genomics of wild and domestic animals and genetic models of experimental domesticationLocal biodiversity of Artemia in the context of the global distribution and invasive speciesMeger Yakov VasilievichMeger Y.V.1, Lantushenko A.O. 11 Sevastopol State University, Sevastopol, Russia.
[Sym 08] 2. Population and evolutionary genetics/genomics of wild and domestic animals and genetic models of experimental domesticationAssessment of imputation quality for low-pass whole-genome sequencing data in Kalmyk cattle using a multi-breed reference panelVolkova Oliveira MariaVolkova Oliveira M.V.1,2, Savelieva S.Yu.2, Speranskaia A.S.2, Bochkaeva Z.V.3, Chernyaeva E.N.11 Federal state budget science institution All-Russian Research Institute for Animal Breeding (FGBNU VNIIplem), Lesnye Polyany, Russia; 2 Vavilov Institute of General Genetics of Russian Academy of Sciences, Moscow, Russia; 3 Kalmyk State University
[Sym 08] 2. Population and evolutionary genetics/genomics of wild and domestic animals and genetic models of experimental domesticationAnalysis of SNP differentiation in CpG islands and transcription factor binding sites in wild and domestic reindeerKonorov Evgenii AndreevichKonorov E.A. 1,2, Semina M.T.1, Sipko T.P.3, Artyushin I.V.4, Layshev K.A. 1,5,1 Vavilov Institute of General Genetics, Russian Academy of Sciences, Moscow, Russia; 2 Gorbatov Federal Research Center for Food Systems, Russian Academy of Sciences, Moscow, Russia; 3 A.N. Severtsov Institute of Ecology and Evolution of the Russian Academy of Sciences, Moscow, Russia; 4 Evolutionary Ecology Group, Department of Biology, University of Antwerp, Antwerp, Belgium; 5 St. Petersburg Federal Research Center, Russian Academy of Sciences, St. Petersburg, Russia
[Sym 08] 2. Population and evolutionary genetics/genomics of wild and domestic animals and genetic models of experimental domesticationScans for signatures of selection in the genomes of the Sychev cattle breedIgoshin AleksandrIgoshin A.V.1, Yudin N.S.1, Larkin D.M.1,21 Institute of Cytology and Genetics, SB RAS, Novosibirsk, Russia; 2 Royal Veterinary College, University of London, London NW1 0TU, UK
[Sym 08] 2. Population and evolutionary genetics/genomics of wild and domestic animals and genetic models of experimental domesticationPrenatal stress-induced alters behaviour in american mink (Neogale vison) offspringTrapezov Oleg VasilevichTrapezov O.V.1,21 Institute of Cytology and Genetics, SB RAS, Novosibirsk, Russia; 2 Novosibirsk State University, Novosibirsk, Russia
[Sym 08] 2. Population and evolutionary genetics/genomics of wild and domestic animals and genetic models of experimental domesticationEvolutionary dynamics of tandem repeats and their relationship with mobile elements in the genomes of anuran amphibians (Ranidae and Pipidae)Ostromyshenskii DmitriiOstromyshenskii DI.1, Ivanova NG.1, Litvinchuk SN.1, Travina AO.11 Institute of Cytology RAS, Saint-Petersburg, Russia
[Sym 09] 1. Microbial communities of natural and anthropogenic habitats, biocollections, creation of producer strainsStudy of the destruction of G-series lignin monomers by the bacterial strain Alcaligenes aquatilis using omics technologiesVasilieva AsyaVasilieva A.R.1,2, Chesnokov D.O.1,2, Pashinina S.S.1, Demko M.A.1, Shipova A.A.1,2, Peltek S.E.1,21 Institute of Cytology and Genetics, SB RAS, Novosibirsk, Russia; 2 Kurchatov Genomic Center of the Institute of Cytology and Genetics, SB RAS, Novosibirsk, Russia
[Sym 09] 1. Microbial communities of natural and anthropogenic habitats, biocollections, creation of producer strainsDevelopment of a Recombinant Acidic alpha-Amylase Producer Based on Molecular and Genetic Analysis of Extremophilic IsolatesKarbolina Ekaterina DmitrievnaKarbolina E.D.1, Uvarova Y.E.1,2, Vasilieva A.R. 1,2, Zadorozhny A.V.1, Shipova A.A.1.2, Bukatich E.Y.1, Bannikova S.V.1,2, Shlyakhtun V.N.1,2, Ushakov V.S.1, Bogacheva N.V.1,2, Korzhuk A.V.1,2, Arbuzov G.D.1, Peltek S.E.1,21 Institute of Cytology and Genetics, SB RAS, Novosibirsk, Russia; 2 Kurchatov Genomic Center of the Institute of Cytology and Genetics, SB RAS, Novosibirsk, Russia
[Sym 09] 1. Microbial communities of natural and anthropogenic habitats, biocollections, creation of producer strainsBioinformatics Assessment of Translation Elongation Efficiency in Yeasts of the Genera Komagataella and PichiaLashin Sergey AlexandrovichLashin S.A.1, Ivanov R.A.1, Afonnikov D.A.1, Matushkin Yu.G.11 Institute of Cytology and Genetics, SB RAS, Novosibirsk, Russia
[Sym 09] 1. Microbial communities of natural and anthropogenic habitats, biocollections, creation of producer strainsDevelopment of strains producing target proteins based on genetic technologiesPeltek Sergei EvgenevichPeltek S.E.1,2, Khlebodarova TM1, Uvarova Y.E.1,2, Zadorozhny A.V.1, Shipova A.A.1.2, Bukatich E.Y.1, Bannikova S.V.1,2, Shlyakhtun V.N.1,2, Gotalskaya Y.D. 1, Karbolina E.D.1, Ushakov V.S.1, Chesnokov D.O.1,2, Bogacheva N.V.1,2, Korzhuk A.V.1,2, Bochkov D.V. 1, Arbuzov G.D.1, Babenko V.N.1, Vasilieva A.R. 1,21 Laboratory of molecular biotechnologies, Institute of Cytology and Genetics, SB RAS, Novosibirsk, Russia; 2 Kurchatov Genomic Center, Institute of Cytology and Genetics SB RAS, Novosibirsk, Russiaa
[Sym 09] 1. Microbial communities of natural and anthropogenic habitats, biocollections, creation of producer strainsAssessing the accuracy of reconstructing metabolic properties of the genus Megasphaera using program gapseqVinichenko Veronika BorisovnaVinichenko V.1, Shikov A.2, Nizhnikov A.1,2, Antonets K.1,21 St. Petersburg State University, St. Petersburg, Russia; 2 All-Russia Research Institute for Agricultural Microbiology, St. Petersburg, Russia
[Sym 09] 1. Microbial communities of natural and anthropogenic habitats, biocollections, creation of producer strainsMycoagents' identification of Monarda didyma plants cultivated in the conditions of the Southern coast of CrimeaSoldatov Denis KonstantinovichBulavin I.1, Soldatov D.11 Nikita Botanical Gardens - National Scientific Center of the RAS, Yalta, Russia
[Sym 09] 1. Microbial communities of natural and anthropogenic habitats, biocollections, creation of producer strainsTwo-time-point WGS metagenomic analysis of the gut microbiome in hospitalized patients reveals short-term stability: preliminary results from a multi-center studySonets Ignat ValerjevichSonets I.V. 1, Krivonos D.V. 1, Pavlenko A.V. 1, Ilina E.N. 1, Govorun V.M. 11 Department of Mathematical Biology and Bioinformatics, Research Institute for Systems Biology and Medicine, Moscow 117246, Russia
[Sym 09] 1. Microbial communities of natural and anthropogenic habitats, biocollections, creation of producer strainsTranscriptomic Analysis of the Strain Acidiplasma sp. YE-1 During the Oxidation of Sulfide MineralsBulaev AleksandrBulaev A.1, Artykova A.1, Elkina Y.1, Kolosov A.1, Beletsky A.1, Kadnikov V.1, Melamud V.1, Mardanov A.11 Research Centre of Biotechnology RAS, Moscow, Russia
[Sym 09] 1. Microbial communities of natural and anthropogenic habitats, biocollections, creation of producer strainsIn vitro modeling of anthrax infection: cultural, molecular, and immunological aspectsKoteneva Elena АнатольевнаKoteneva E.A., Tsygankova O.I., A.V. Kalinin A.V., Rodionov I.S., Daudova V.R.1 Stavropol Anti-Plague Research Institute, Stavropol, Russia
[Sym 09] 1. Microbial communities of natural and anthropogenic habitats, biocollections, creation of producer strainsAlgorithm for designing primer panels for broad-range screening of viromes using high-throughput sequencingGukov Boris SergeevichGukov B.1, Stetsenko I.1, Matsvay A.1, Shipulin G.11 Federal State Budgetary Institution “Centre for Strategic Planning and Management of Biomedical Health Risks” of the Federal medical and biological agency, Moscow, Russia
[Sym 09] 1. Microbial communities of natural and anthropogenic habitats, biocollections, creation of producer strainsSecretome of Bacteroides as a Source of Immunomodulatory Factors: Prospects for Probiotic TherapyZakharzhevskaya Natalya BZakharzhevskaya N.1, Podoprigora I.2, Chaplin A.3, Kardonsky D.1, Vorobyova E.1, Kashatnikova D.1,4, Kazakova V.1, Kolesnikova I.1, Efimov B.11 Lopukhin Federal Research and Clinical Center of Physical-Chemical Medicine, FMBA of Russia; 2 Peoples’ Friendship University of Russia named after Patrice Lumumba; 3 Pirogov Russian National Research Medical University, 1 Ostrovityanova St., 117997, Moscow, Russia; 4 Laboratory of Ecological Genetics, Vavilov Institute of General Genetics, Russian Academy of Sciences, Moscow, Russia.
[Sym 09] 1. Microbial communities of natural and anthropogenic habitats, biocollections, creation of producer strainsMicrobial successions in Enhanced Biological Phosphorus RemovalPimenov NikolayPimenov N.V. 1, Pelevina A.V.1, Dorofeev A.G.1, Hasanova A.A. 2, Sirotkin A.S.2, Gruzdev E.V.3, Mardanov 31 Winogradsky Institute of Microbiology, Research Centre of Biotechnology, Russian Academy of Sciences, Moscow, 119071 Russia; 2 Kazan National Research Technological University, Kazan, 420015, Republic of Tatarstan, Russia; 3 Skryabin Institute of Bioengineering, Research Centre of Biotechnology, Russian Academy of Scienc-es, Moscow, 119071 Russia
[Sym 09] 2. Biotechnology through the lens of the microbiomeDiscovery of Pharmabiotic Candidates from Pediatric Gut Mi-crobiota: A Multi-Omics Study of Faecalibacterium prausnitziiVatlin AlekseyVatlin A.A.1,2, Gordeev A.B. 2, Danilenko V.N. 1 and Tatiana V. Priputnevich 21 Laboratory of Bacterial Genetics, Vavilov Institute of General Genetics, Russian Academy of Scienc-es, Moscow, 119333, Russia; 2 Institute of microbiology, antimicrobial therapy and epidemiology, National Medical Research Cen-ter for Obstetrics, Gynecology and Perinatology named after Academician V.I. Kulakov of Ministry of Healthcare of Russian Federation, 117997, Moscow, Russia
[Sym 09] 2. Biotechnology through the lens of the microbiomeExtracellular vesicles of Limosilactobacillus fermentum strain U-21Bekker Olga BTroshina D.A.1, Nesterov A.A.1, Mavletova D.A.1, Letvinova V.S.1, Odorskaya M.V.1, Smirnova S.V.1, Bekker O.B.1, Poluektova E.U.1, Danilenko V.N.11 Vavilov Institute of General Genetics Russian Academy of Sciences, Moscow, Russia
[Sym 09] 2. Biotechnology through the lens of the microbiomeGut Microbiota, Immune Cells, and Osteoporosis: A Trans-Ethnic Mendelian Randomization AnalysisMeng LinlinMeng L.L.1, Liu J.J.11 Department of Biomedical Engineering, Nanjing University of Aeronautics and Astronautics, Nanjing, China
[Sym 09] 2. Biotechnology through the lens of the microbiomeThe effect of Limosilactobacillus fermentum U-21 on molecular and microbiotic markers in a combined model of Parkinson's diseaseReznikova Diana AndreevnaReznikova D.1,2, Bekker O.1, Letvinova V.1, Vatlin A.1, Stavrovskaya A.3, Danilenko V.11 Vavilov Institute of General Genetics, Russian Academy of Sciences, Moscow, Russia; 2 Moscow Institute of Physics and Technology, Dolgoprudny, Russia; 3 Russian Сenter of Neurology and Neurosciences, Moscow, Russia
[Sym 09] 2. Biotechnology through the lens of the microbiomeGenomic Determinants of Pharmabiotic Activity in Limosilactobacillus fermentumTroshina Daria AleksandrovnaTroshina D.A.1, Poluektova E.U.1, Danilenko V.N.11 Vavilov Institute of General Genetics Russian Academy of Sciences, Moscow, Russia
[Sym 09] 2. Biotechnology through the lens of the microbiomeΔFN3 proteins of Bifidobacterium adolescentis strains: phylogenetic diversity and in vitro binding to cytokinesAkimova Natalia IgorevnaAkimova N.I.1, Alekseeva M.G.1, Mavletova D.A.1, Danilenko V.N.11 Vavilov Institute of General Genetics, Russian Academy of Sciences Moscow, Russia
[Sym 09] 2. Biotechnology through the lens of the microbiomeSearch for promising strains of Fecalibacterium prausnitzii to create a metabiotic of new generationGordeev Alexey B.Гордеев A.Б.1, Муравьёва В.В.1, Кузнецова В.А.1, Бембеева Б.О.1,2, Жигалова К.Н.1, Ватлин А.А.3, Даниленко В.Н.3, Припутневич Т.В.1,41 National Medical Research Center for Obstetrics, Gynecology and Perinatology named after Academician V.I. Kulakov of Ministry of Healthcare of Russian Federation, Moscow, Russia; 2 Pirogov Russian National Research Medical University of Ministry of Healthcare of Russian Federation, Moscow, Russia; 3 Vavilov Institute of General Genetics, Russian Academy of Sciences, Moscow, Russia; 4 Russian Medical Academy of Continuing Professional Education, Moscow, Russia
[Sym 09] 2. Biotechnology through the lens of the microbiomeHealth and Effective Longevity through the Prism of the MicrobiomeDanilenko Valery NikolayevichDanilenko V.N.1,21 Vavilov Institute of General Genetics, Russian Academy of Sciences, Moscow, Russia; 2 Consortium “Neurosciences - Microbiome: Neurodegenerative, Mental and Cognitive Disorders”, Moscow, Russia
[Sym 09] 2. Biotechnology through the lens of the microbiomeGut microbiota: from basic research to therapeutic strategiesPriputnevich Tatiana V.Priputnevich T.V.1,21 National Medical Research Center for Obstetrics, Gynecology and Perinatology named after Academician V.I. Kulakov of Ministry of Healthcare of Russian Federation, Moscow, Russia; 2 Russian Medical Academy of Continuing Professional Education of Ministry of Healthcare of Russian Federation, Moscow, Russia
[Sym 09] 2. Biotechnology through the lens of the microbiomeComputational Reconstruction of Gene Networks of Regulatory Interactions Between the Microbiota and Biological Processes in Human Neurodegenerative DiseasesIvanisenko Vladimir AleksandrovichIvanisenko V.A.,Khlebodarova T.M., Kleshchev M.A., Volyanskaya N.R., Yatsyk I.V., Antropova E.A., Adamovskaya A.V., Ivanisenko T.V., Demenkov P.S., Kolchanov N.A.1 Kurchatov Genomic Center of the Institute of Cytology and Genetics SB RAS, Novosibirsk, Russia
[Sym 09] 2. Biotechnology through the lens of the microbiomeReconstructing the interaction between Limosilactobacillus fermentum U-21 products and human host pathways in Parkinson’s disease: a way towards an integrated gene networkNesterov Andrey AndreevichNesterov A.1,2, Ivanisenko V.3, Danilenko V.11 Vavilov Institute of General genetics RAS, Moscow, Russia; 2 Moscow Institute of Physics and Technology, Dolgoprudny, Russia; 3 Institute of Cytology and Genetics, SB RAS, Novosibirsk, Russia
[Sym 09] 2. Biotechnology through the lens of the microbiomeBinding of ΔFN3 proteins from Bifidobacterium longum GT15 and Bifidobacterium bifidum 791 to cytokinesBorisevich Sophia S.Borisevich S.1, Yusupova A. 2, Alekseeva M.2, Danilenko V. 21 Siberian Circular Photon Source “SKlF” Boreskov Institute of Catalysis of Siberian Branch of the Russian Academy of Sciences, Koltsovo, Russia; 2 Vavilov Institute of General Genetics, Russian Academy of Sciences, Moscow, Russia
[Sym 09] 2. Biotechnology through the lens of the microbiomeStudy of Bacterial and Viral Communities in the Gut of Patients with Ulcerative Colitis Before and After Sterile Fecal Filtrate TransplantationFedorets Valeria AleksandrovnaFedorets V.1, Tikunova N.11 Institute of Chemical Biology and Fundamental Medicine, Siberian Branch of the Russian Academy of Sciences, Novosibirsk, Russia
[Sym 09] 2. Biotechnology through the lens of the microbiomeHow the leader peptide coordinates the functioning of the transcriptional attenuator of the ilvBNC operon in C. glutamicumTitov IgorTitov I.I.1,2*, Ryabchenko L.E.3, Leonova T.E.3, Kalinina T.I.3 , Kolchanov N.A.1,2, Khlebodarova T.M.1,2, Yanenko A.S.31 Institute of Cytology and Genetics SB RAS, Novosibirsk, Russia; 2 Kurchatov Genome Center, ICG SB RAS, Novosibirsk, Russia; 3 National Research Center "Kurchatov Institute", Kurchatov Genome Center, Moscow, Russia
[Sym 10] 1. Molecular medicine: gene expression and human diseasesDifferential expression of genes and unstable atherosclerotic plaqueShakhtshneider ElenaRagino Yu.1, Shakhtshneider E.11 Research Institute of Internal and Preventive Medicine - Branch of the Institute of Cytology and Ge-netics, SB RAS, Novosibirsk, Russia
[Sym 10] 1. Molecular medicine: gene expression and human diseasesNeck pain, metabolic syndrome and osteoarthritis: integrating epidemiology with genomic dataShirinsky IvanShirinsky I.V.1, Alexandrovitch E.A.2, Shirinsky V.S.11 Laboratory for the Study of Multimorbidity in Rheumatic Diseases, Research Institute of Internal and Preventive Medicine - Branch of the Institute of Cytology and Genetics, Siberian Branch of Russian Academy of Sciences, 175/1 B. Bogatkova Street, Novosibirsk, Russia; 2 Federal State Autonomous Educational Institution of Higher Education “Novosibirsk National Research State University”, Ministry of Science and Higher Education of the Russian Federation, 630090, Novosibirsk, Russian Federation
[Sym 10] 1. Molecular medicine: gene expression and human diseasesSubclinical atherosclerosis and leucocyte telomere length in the ageingRyabikov Andrew N.Ryabikov A.1, Maximov V.1, Butakov E.1, Malyutina S.11 Research Institute of Internal and Preventive Medicine - Branch of the Institute of Cytology and Ge-netics, SB RAS (IIPM - Branch IC&G, SB RAS), Novosibirsk, Russia
[Sym 10] 1. Molecular medicine: gene expression and human diseasesMultiplex therapy for Parkinson's disease: combined small molecule targeting of LRRK2, mTOR, and STINGUsenko TatianaT.S. Usenko 1,2, A.I. Bezrukova 1,2, K.S. Basharova 1, E.V. Grigor’eva 3, S.V. Pavlova 3, G.V. Baydakova 4, I.V. Miliukhina 5, E.Yu. Zakharova 4, S.N. Pchelina 1,21 Petersburg Nuclear Physics Institute named by B.P. Konstantinov of National Research Center «Kurchatov Institute», 188300, Gatchina, 1, mkr. Orlova roshcha; 2 Pavlov First Saint-Petersburg State Medical University, 197022, Saint-Petersburg, L'va Tolstogo str. 6-8; 3 Institute of Cytology and Genetics, Siberian Branch of Russian Academy of Sciences, 630090, Novosibirsk, 10, Ac. Lavrentieva ave.; 4 Research Centre for Medical Genetics, 115522, Moscow, Moskvorechye St, 9; 5 Institute of the Human Brain RAS, Saint-Petersburg, st. acad. Pavlova, 9
[Sym 10] 1. Molecular medicine: gene expression and human diseasesA single-cell atlas of ovarian cancer reveals TME-driven immune phenotypes for patient stratificationJia WenjingWenjing Jia 1, Junhua Li 1, Yixuan Wang 1, Jingjing Liu 1, Quan Wang 1, Yuan Xie 2, Xiaofeng Song 1, Jian Zhao11 Department of Biomedical Engineering, Nanjing University of Aeronautics and Astronautics, Nanjing 211106, China; 2 Department of Radiology, Women's Hospital of Nanjing Medical University (Nanjing Women and Children's Healthcare Hospital), Nanjing 210018, China
[Sym 10] 1. Molecular medicine: gene expression and human diseasesTranscriptomic markers and the role of neutrophil activation in severe course of COVID-19Gusarova AnastasiaGusarova A.1, Trifonova E.1, Babovskaya A.1, Gavrilenko M. 1, Gabidulina T.2, Zhilyakova O. 2, Stepanov V. 11 Research Institute of Medical Genetics, Tomsk National Research Medical Center of RAS, Tomsk, Russia; 2 Siberian State Medical University, Tomsk, Russia
[Sym 10] 1. Molecular medicine: gene expression and human diseasesMolecular Genetic Alterations in Circulating Monocytes in the Post-COVID PeriodBalan Olga ViktorovnaBalan O.1, Malysheva I.1, Rodionova V.1, Tichonovich E.2, Lysenko L.11 Center for Medical and Biological Research, KarRC RAS, Petrozavodsk, Russia; 2 Respiratory Centre, Republic Hospital Named after V.A. Baranov, Petrozavodsk, Russia
[Sym 10] 1. Molecular medicine: gene expression and human diseasesBioinformatic analysis of biochemical activity in intact human endothelial cellsKutikhin AntonStepanov A.D.1, Shishkova D.K.1, Kabilov M.R.2, Tupikin A.E.2, Kutikhin A.G.11 Research Institute for Complex Issues of Cardiovascular Diseases, Kemerovo, Russia; 2 Institute of Chemical Biology and Fundamental Medicine, Siberian Branch of the Russian Academy of Sciences, Novosibirsk, Russia
[Sym 10] 1. Molecular medicine: gene expression and human diseasesPan-cancer analysis of tumor microenvironment subtypes based on single-cell RNA sequencingChesnokova AnnaChesnokova A.1, Yurchenko A.21 ITMO University, Saint-Petersburg, Russia; 2 Institute Gustave Roussy, Villejuif, France
[Sym 10] 1. Molecular medicine: gene expression and human diseasesComparison of the correlation landscapes of the AGE/RAGE / NF-κB axis gene expression in blood monocytes and metabolic health parameters in health and insulin resistanceBograya Maria MikhailovnaBograya M.M.1, Voronova S.S.1, Gazatova N.D.1, Litvinova L.S.11 Center for Immunology and Cellular Biotechnology, Immanuel Kant Baltic Federal University, Kali-ningrad, Russia
[Sym 10] 1. Molecular medicine: gene expression and human diseasesComprehensive study of physiological differentiation and pathological calcification mechanisms based on multi-omics dataKuchur Polina DKuchur P.1, Lobov A.1, Malashicheva A.11 Institute of Cytology, Russian Academy of Sciences, St. Petersburg, Russia
[Sym 10] 1. Molecular medicine: gene expression and human diseasesIntegrative Analysis of Epigenetic Mechanisms Regulating Metabolism and Inflammation in Macrophages Exposed to oxLDLBorodko Daria DmitryevnaBorodko D.1, Makarova D.1,2, Ishtuganova V.3, Kravchenko M.3, Ezhov D.4, Sukhorukov V.11 Institute of General Pathology and Pathophysiology, Moscow, Russia; 2 Pirogov Russian National Research Medical University, Moscow, Russia; 3 Saint Petersburg State University, Saint Petersburg, Russia; 4 ITMO University, Saint Petersburg, Russia
[Sym 10] 1. Molecular medicine: gene expression and human diseasesIdentification of Diagnostic and Prognostic Genes of Intrinsic Subtypes of HER2-Negative Luminal B Breast Cancer Using Transcriptomic Data from SCAN-B, TCGA, and METABRICGlushak RomanGlushak R.1, Rakitina O.1, Kondratyeva S.1, Didych D.1, Sukhova M.2, Zhukova L.2, Alekseenko I.11 Shemyakin-Ovchinnikov Institute of Bioorganic Chemistry of the Russian Academy of Sciences, Mos-cow, Russia; 2 SBIH Moscow Clinical Scientific Center Named After A.S. Loginov of DHM, Moscow, Russia
[Sym 10] 1. Molecular medicine: gene expression and human diseasesSpatially restricted clonal T cell expansion and cytotoxic Th1 phenotype define the adaptive immune landscape of atherosclerotic plaquesPolyakov FedorPolyakov F.M.1, Tverdova N.1,2, Tuliavko V.3, Tabakyan E.A.4, Merzlyak E.M.1,2, Britanova O.V.1,2,7, Chudakov D.M.1,2,5,6,71 Shemyakin and Ovchinnikov Institute of Bioorganic Chemistry, Moscow, Russian Federation; 2 Pirogov Russian National Research Medical University, Moscow, Russian Federation; 3 Research Institute of Molecular and Cellular Medicine, RUDN University, Moscow, Russian Federa-tion; 4 National Medical Research Center for Cardiology named after academician Yevgeniy Chazov, Mos-cow, Russian Federation; 5 Central European Institute of Technology, Masaryk University, Brno, Czech Republic; 6 Center of Life Sciences, Skoltech, Moscow, Russian Federation; 7 Abu Dhabi Stem Cells Center, Abu Dhabi, United Arab Emirates
[Sym 10] 1. Molecular medicine: gene expression and human diseasesThe concept of natural genome reconstruction. Natural correction of the pathological allele of the SERPINE1 gene in hematopoietic stem cellsBogachev SergeyRuzanova V.S.1, Oshchepkov D.Y.1, Aksenova A.M.1, Proskurina A.S.1, Bogachev S.S.11 Institute of Cytology and Genetics, SB RAS, Novosibirsk, Russia
[Sym 10] 1. Molecular medicine: gene expression and human diseasesПарная изогенная модель рака шейки матки AdMer35/AdMer43: от фенотипической характеристики до анализа транскриптома одиночных клеток для картирования резистентности к химиолучевой терапииLogashenko EvgeniyaДмитрий Семенов; Ирина Татарникова; Александра Сенькова; Анна Чеснокова; Дарья Михайлова; Марина Зенкова; Евгения ЛогашенкоIChBFM
[Sym 10] 2. Molecular pathology, diagnostics, and therapyMorphological effects of experimental use of antisense oligonucleotides in melanomaZiablitskaia Evgeniia YurievnaYurchenko K.A.1, Marulova A.V.1, Zyablitskaya E.11 FSAEI HE “V.I. Vernadsky Crimean Federal University", Simferopol, Russia
[Sym 10] 2. Molecular pathology, diagnostics, and therapyFeatures of the tumor microenvironment of serous ovarian carcinomasZiablitskaia Evgeniia YurievnaGolovkin I.O.1, Marulova A.V.1, Zyablitskaya E. Yu.11 FSAEI HE “V.I. Vernadsky Crimean Federal University", Simferopol, Russia
[Sym 10] 2. Molecular pathology, diagnostics, and therapyAI-Driven Discovery of Bictegravir as a Candidate Inhibitor of SARS-CoV-2 ORF3a: Integrating Graph Neural Networks with the ANDSystem Cognitive PlatformIvanisenko TimofeyIvanisenko T.V.1, Demenkov P.S.1, Kleshev M.V.1, Ivanisenko V.A.11 Institute of Cytology and Genetics, Siberian Branch of the Russian Academy of Sciences, Novosibirsk, Russia
[Sym 10] 2. Molecular pathology, diagnostics, and therapyFeatures of the stromal architecture in human uveal melanomaShatruk AnastasiiaShatruk A.I.1, Bgatova N.P.1, Trunov A.N.2, Chernykh V.V.2, Taskaeva Iu.S.11 Research Institute of Clinical and Experimental Lymрhology - Branch of the Institute of Cytology and Genetics, Siberian Branch of Russian Academy of Sciences, Siberian Branch of the Russian Academy of Sciences, Novosibirsk, Russian Federation; 2 S. Fyodorov Eye Microsurgery Federal State Institution, Novosibirsk Branch, Novosibirsk, Russian Federation
[Sym 10] 2. Molecular pathology, diagnostics, and therapyFEN1 Fusion via a Short Linker Significantly Augments PEmax Editing EfficiencyIvleva AnastasiiaIvleva A.1, Volodina O.1, Demchenko A.1, Smirnikhina S.11 Research Centre of Medical Genetics, Moscow, Russia
[Sym 10] 2. Molecular pathology, diagnostics, and therapyEffect of the flavonoid hesperidin on the number of functionally active mitochondria and reactive oxygen species production in the brain of Danio rerio after laser-induced traumatic brain injuryNekhoroshev EvgenyNekhoroshev E.V.1,2, Sudakov N.P.3, Wang S. 1, Klimenkov I.V.3, Markova E.V.2, Amstislavskaya T.G.1 Novosibirsk State University, Novosibirsk, Russia; 2 Research Institute of Fundamental and Clinical Immunology, Novosibirsk, Russia; 3 Limnological Institute SB RAS, Irkutsk, Russia
[Sym 10] 2. Molecular pathology, diagnostics, and therapyFrom evolution to pathology: structural disruptions in HARS as a key to enhanceropathies and translational targets in neurodevelopmental disordersIuditskaia Maria EvgenievnaIuditskaia M.E.1, Pankratova E.D.1, Semina E.V.1, Chaika Yu.A.1, Iourov I.Y.11 Federal State Budgetary Scientific Institution Mental Health Research Center, Moscow, Russia
[Sym 10] 2. Molecular pathology, diagnostics, and therapyCAR T-cell Therapy: New Opportunities for Personalized Treatment in RheumatologyOmelchenko Vitaly OlegovichOmelchenko V1*, Kulemzin, S.1, Belovezhets T.1, Rybakova A.1, Shishaeva U.1, Solovyeva A.11 Institute of Cytology and Genetics, SB RAS, Novosibirsk, Russia
[Sym 10] 2. Molecular pathology, diagnostics, and therapyCan proteomics become a legitimate diagnostic tool in clinical practice?Sello EkaterinaSello. E1, Benediktova Y.1, Gorbunov K11 Research Institute for Systems Biology and Medicine, Moscow, Russia
[Sym 10] 2. Molecular pathology, diagnostics, and therapyModification of lentiviral particles for targeted delivery of genetic constructsBelovezhets TatyanaBelovezhets T.1, Kulemzin S.1,2,3.1 Research Institute of Clinical and Experimental Lymрhology - Branch of the Institute of Cytology and Genetics of the SB RAS, 630117, Novosibirsk, Russian Federation; 2 Institute of Molecular and Cellular Biology SB RAS, 630090, Novosibirsk, Russian Federation; 3 Novosibirsk State University, 630090, Novosibirsk, Russian Federation
[Sym 10] 2. Molecular pathology, diagnostics, and therapyMolecular mechanisms of interactions between prospective drugs based on D-peptides and beta-amyloidKryuchkova Anastasia KonstantinovnaKryuchkova A.1, Limonova A.1, Karapetyants E.1, Bocharov E.1, Ohrimenko I.11 Moscow Institute of Physics and Technology, Moscow, Russia
[Sym 10] 2. Molecular pathology, diagnostics, and therapyThe influence of mitochondrial haplogroups on cytokine secretion by monocytes in obesityVoronova SophiaVoronova S.S.1, Bograya M.M.1, Malashchenko V.V.1, Litvinova L.S. 11 Center for Immunology and Cellular Biotechnology, Immanuel Kant Baltic Federal University (IKB-FU), Kaliningrad, Russia
[Sym 10] 2. Molecular pathology, diagnostics, and therapyDevelopment of lateral flow assays based on conjugates of gold nanoparticles with various recognition molecules for the detection of C-reactive proteinEpanchintseva AnnaBaeva E.1, Vorobjev P.1, Pyshnaya I.1, Epanchintseva A.11 The Institute of Chemical Biology and Fundamental Medicine, SB RAS, Novosibirsk, Russia
[Sym 10] 2. Molecular pathology, diagnostics, and therapyWhy cell therapy is poorly applicable to solid tumor typesKulemzin SergeiKulemzin S.1, Omelchenko V.1, Belovezhets T.11 Institute of Cytology and Genetics, SB RAS, Novosibirsk, Russia
[Sym 10] 2. Molecular pathology, diagnostics, and therapyGene expression analysis in rat organs after hemorrhagic shock of different severity and durationBrezgunova Anna AleksandrovnaBrezgunova A.A. 1, Andrianova N.V. 1, Bocharnikov A.D. 1,2, Remneva E.S. 1,3, Kirpicheva D.A. 1,4, Buyan M.I. 1,2, Cherkesova K.S.1,5, Pevzner I.B. 1, Lapin K.N.6, Kalabushev S.N. 1,6, Ryzhkov I.A. 6, Plotnikov E.Y. 11 Belozersky Institute of Physico-Chemical Biology, Lomonosov Moscow State University, Moscow, Russia; 2 Faculty of Bioengineering and Bioinformatics, Lomonosov Moscow State University, Moscow, Russia; 3 Peoples' Friendship University of Russia named after Patrice Lumumba, Moscow, Russia; 4 Sechenov First Moscow State Medical University (Sechenov University), Ministry of Health of Russia, Moscow, Russia; 5 Faculty of Biology, Lomonosov Moscow State University, Moscow, Russia; 6 Negovsky Research Institute of General Reanimatology, Federal Research and Clinical Center of Intensive Care Medicine and Rehabilitology, Moscow, Russia
[Sym 10] 2. Molecular pathology, diagnostics, and therapyAnti-inflammatory activity of cytokine-targeted aptamers in primary cell cultures from patients with immunoinflammatory rheumatic diseasesSolovieva AnastasiyaSolovieva A.O.1, Vorobyeva M.A.2, Rippinen D.V.1, Korolev M.A.11 Research Institute of Clinical and Experimental Lymphology - Affiliated Branch of Federal Research Centre Institute of Cytology and Genetics, SB RAS, Novosibirsk, Russia; 2 Institute of Chemical Biology and Fundamental Medicine SB RAS, Novosibirsk, Russia
[Sym 10] 2. Molecular pathology, diagnostics, and therapyMathematical modeling of pharmacokinetics and pharmacodynamics of doxorubicin in free form and using nanoparticles: from in vitro to in vivoPirchkhadze Semen ZurabovichPirchkhadze S.Z.1, Kolpakov F.A.1, Zvyagin A.V.11 Sirius University of Science and Technology, Sirius, Russia
[Sym 10] 2. Molecular pathology, diagnostics, and therapyGenomic surveillance of pneumonia outbreak caused by Mycoplasma pneumoniae in Russian FederationKorneenko ElenaKorneenko E.V.1, Rog I.S1, Chudinov I.K.1,2, Kozyreva A.I.1, Kuzmina I.E.1, Drozh-zhina M.A.1, Fedorov O.V.1, Sandanova D.A.1, Pavlenko A.V. 1, Speranskaya A.S. 3, Matyushkina D.S.1, Govorun V.M.1,21 Research Institute for Systems Biology and Medicine, Moscow, Russia; 2 Moscow Institute of Physics and Technology National Research University, Moscow, Russia; 3 Vavilov Institute of General Genetics, Russian Academy of Sciences, Moscow, Russia
[Sym 10] 2. Molecular pathology, diagnostics, and therapyChallenges associated with cardiovascular risk stratification in autoinflammatory disorders.Oktysyuk Polina DmitrievnaOktysyuk P.1, Tyrenko V.1, Shcherbatyuk O.1, Bologov S.11 S.M. Kirov Military medical academy, St. Petersburg
[Sym 10] 2. Molecular pathology, diagnostics, and therapyTranscription of pericentromeric tandemly repeated DNA of HSAT2/HSAT3 families in stromal fibroblasts of lung adenocarcinomaEnukashvily NatellaEnukashvily N.I.1,2, Ponomartsev N.V.1, Chaika D.D.1, Solovyeva A.I.1, Belik L.A.1,3, Busnyuk T.A.1, Przhibelskii A.D.2, Ostromyshenskii D.D.1, Brichkina A.I.41 Institute of Cytology of the Russian Academy of Sciences, St. Petersburg, Russia; 2 St. Petersburg University, St. Petersburg, Russia; 3 Russian Research Institute of Hematology and Transfusiology of the Federal Medical Biological Agency, St. Petersburg, Russia; 4 Philipps University of Marburg, Department of Gastroenterology, Center for Tumor- and Immune Biology, Marburg, Germany
[Sym 10] 3. Interstitial space and extravascular drainage/transport pathwaysInterstitial biophotonics: human skin water model for photomedicineNebrat Vladimir ViktorovichNebrat V.11 Research Institute of Clinical and Experimental Lymphology - Branch of the Institute of Cytology and Genetics, SB RAS, Novosibirsk, Russia
[Sym 10] 3. Interstitial space and extravascular drainage/transport pathwaysInterstitial features of thyroid segmentsUshakov AndreyUshakov A.1, Velmyakina S.1, Nebrat V.21 Dr. A.V. Ushakov's Clinic, Moscow, Russia; 2 Research Institute of Clinical and Experimental Lymphology - Branch of the Institute of Cytology and Genetics, Siberian Branch of the Russian Academy of Sciences, Novosibirsk, Russia.
[Sym 10] 3. Interstitial space and extravascular drainage/transport pathwaysThe role of the interstitium in the pathogenesis of Graves’ diseaseVelmyakina SvetlanaVelmyakina S.1, Ushakov A.1, Nebrat V.21 Ushakov Thyroid Clinic, Moscow, Russia; 2 Research Institute of Clinical and Experimental Lymphology - Branch of the Institute of Cytology and Genetics, Siberian Branch of the Russian Academy of Sciences, Novosibirsk, Russia.
[Sym 10] 3. Interstitial space and extravascular drainage/transport pathwaysModel of biofluid balance in the microcirculatory bed and interstitiumLetyagin Andrei YurievichLetyagin A.1, Khapaev R.1, Belan I.1, Nimaev V.11 Research Institute of Clinical and Experimental Lymрhology - Branch of the Institute of Cytology and Genetics, SB RAS, Novosibirsk, Russia
[Sym 10] 3. Interstitial space and extravascular drainage/transport pathwaysStructural organization of the interstitium of rectal adenocarcinoma in the center and periphery of tumor growthBgatova Nataliya PetrovnaBgatova N.1, Skudin N.2, Shatruk A.1, Ryaguzov M.3, Lomakin A.2, Fursov S.21 Research Institute of Clinical and Experimental Lymрhology - Branch of the Institute of Cytology and Genetics, Siberian Branch of Russian Academy of Sciences, Novosibirsk, Russia; 2 Novosibirsk Regional Clinical Oncology Dispensary, Novosibirsk, Russia; 3 "EUROMED" Clinic, Novosibirsk, Russia.
[Sym 10] 3. Interstitial space and extravascular drainage/transport pathwaysRemodeling of the skin melanoma extracellular matrix during autophagy modulationTaskaeva IuliiaTaskaeva I.1, Shatruk A.1, Bgatova N.11 Research Institute of Clinical and Experimental Lymphology - Branch of the Institute of Cytology and Genetics, SB RAS, Novosibirsk, Russia
[Sym 10] 3. Interstitial space and extravascular drainage/transport pathwaysCellular and molecular effects of various light spectra during incubation of Lake Baikal whitefish eggs as a basis for aquaculture optimizingVakhteeva EvgeniaE.A. Vakhteeva1*, A.A. Epifantsev1, A.G. Koroleva1, V.M. Yakhnenko1, S.A. Potapov, L.V. Sukhanova1, O.Yu. Glyzina1, Changxu Tian 2, Xian Li 3, Yu. P. Sapozhnikova11 Limnological Institute Siberian Branch of the Russian Academy of Sciences, 3 Ulan-Batorskaya, Irkutsk 664033, Russia; 2 Guangdong Research Center on Reproductive Control and Breeding Technology of Indigenous Valuable Fish Species, Guangdong Provincial Engineering Laboratory for Mariculture Organism Breeding, Guangdong Provincial Key Laboratory of Aquatic Animal Disease Control and Healthy Culture, Fisheries College, Guangdong Ocean University, Zhanjiang 524088, China; 3 Key Laboratory of Mariculture, Ministry of Education, Fisheries College, Ocean University of China, Qingdao 266001, China
[Sym 11] Cognitive science, neurogenetics, neuroinformatics, and systems computational biologyTemporal EEG Dynamics in the Processing of Structural Violations in Language and ArithmeticLebedkin DmitriLebedkin D.1,2,3*, Saprygin A.1,3, Savostyanov A.1,2,31 Scientific Research Institute of Neurosciences and Medicine, Novosibirsk, Russia; 2 Novosibirsk State University, Novosibirsk, Russia; 3 Institute of Cytology and Genetics, SB RAS, Novosibirsk, Russia
[Sym 11] Cognitive science, neurogenetics, neuroinformatics, and systems computational biologyEffect of the 5-HTTLPR serotonin transporter allelic polymorphism on behavioral and neurophysiologic indicators of children's inhibitory controlSavostyanov Alexander NikolaevichSavostyanov A.1,2,3*, Bocharov A. 2, Saprygin A.1,2, Savostyanov V.2, Tamozhnikov S.21 Institute of Cytology and Genetics, SB RAS, Novosibirsk, Russia; 2 Scientific Research Institute of Neurosciences and Medicine, Novosibirsk, Russia; 3 Novosibirsk State University, Novosibirsk, Russia
[Sym 11] Cognitive science, neurogenetics, neuroinformatics, and systems computational biologyEffects of 5-HT7 receptor gene overexpression in frontal cortex astrocytes on behavior and neuroplasticity factors in C57BL/6 mice subjected to chronic ethanol consumptionOreshko AlinaOreshko A.1*, Rodny A., 1, Naumenko V. 1, Bazovkina D.11 Institute of Cytology and Genetics, SB RAS, Novosibirsk, Russia
[Sym 11] Cognitive science, neurogenetics, neuroinformatics, and systems computational biologyInvestigation of fMRI data using a method for analyzing the reproducibility of brain activity under self-reference conditionsPershin Andrey DmitrievichPershin A.1*, Savostyanov A.1,21 Institute of Cytology and Genetics, SB RAS, Novosibirsk, Russia; 2 Scientific Research Institute of Neurosciences and Medicine, Novosibirsk, Russia
[Sym 11] Cognitive science, neurogenetics, neuroinformatics, and systems computational biologyRelationship between the amplitude of evoked potentials under motion control conditions and the individual single nucleotide variability of genetic markers of major depressive disorderSavostyanov Alexander NikolaevichZorina K.A.3*, Kriveckiy A.A.2, Karmanov V.S.2, Savostyanov A.N.1,2,31 Institute of Cytology and Genetics of the Siberian Branch of the Russian Academy of Sciences, Novosibirsk, Russia; 2 Novosibirsk State Technical University, Novosibirsk, Russia; 3 Novosibirsk State University, Novosibirsk, Russia
[Sym 11] Cognitive science, neurogenetics, neuroinformatics, and systems computational biologyAnalysis of the relationship between genetic and neurophysiological markers of the affective pathology risk in humansKuleshov Dmitriy AlexandrovichKuleshov D.A.1, Savostyanov A.N.1,2,31 Institute of Cytology and Genetics, SB RAS, Novosibirsk, Russia; 2 Scientific Research Institute of Neurosciences and Medicine, Novosibirsk, Russia; 3 Novosibirsk State University, Novosibirsk, Russia
[Sym 11] Cognitive science, neurogenetics, neuroinformatics, and systems computational biologyRole of tumor necrosis factor in the regulation of behavior and brain serotonin system during long-term dexamethasone administrationSkotnikova AnnaSkotnikova A.1, Adonina S.1, Moskaliuk V.1, Bazovkina D.11 Institute of Cytology and Genetics, SB RAS, Novosibirsk, Russia
[Sym 11] Cognitive science, neurogenetics, neuroinformatics, and systems computational biologyIn silico reconstruction and bioinformatic analysis of the cytokine regulatory network of genes and proteins associated with autism spectrum disordersLevanova NataliaLevanova N.M.1, Vergunov E.G.1,2,3, Savostyanov A.N.1,2,3, Yatsyk I.V.1, Ivanisenko V.A.1, Trifonova E.A. 11 Institute of Cytology and Genetics of the Siberian Branch of the Russian Academy of Sciences, Novosibirsk, Russia; 2 Scientific Research Institute of Neurosciences and Medicine, Novosibirsk, Russia; 3 Novosibirsk State University, Novosibirsk, Russia
[Sym 11] Cognitive science, neurogenetics, neuroinformatics, and systems computational biologyTranslational approach to in silico reconstruction and bioinformatic analysis of gene networks controlling anxiety levels in humansVergunov Evgeny GennadevichVergunov E.G. 1,2,3, Savostyanov V.A. 4, Makarova A.A. 3, Nikolaeva E.I. 4, Savostyanov A.N. 1,2,3, Levanova N.M. 1, Alekseeva A.E. 3, Maltseva A.V. 31 Federal Research Center Institute of Cytology and Genetics, Siberian Branch of the Russian Academy of Sciences (ICG SB RAS), Novosibirsk, Russia; 2 Research Institute of Neurosciences and Medicine (RINM), Novosibirsk, Russia; 3 Novosibirsk State University (NSU), Novosibirsk, Russia; 4 Herzen State Pedagogical University of Russia, St. Petersburg, Russia
[Sym 11] Cognitive science, neurogenetics, neuroinformatics, and systems computational biologyCognitive impairment detection using Artificial Intelligence. Comparative study of large language models in multimodal architectures.Osadchii Gleb GennadevichOsadchii G.G.1*, Koshel A.A. 2, Smirnova D.A.1, Shusharina N.N.11 Baltic Center for neurotechnology and artificial intelligence, Immanuel Kant Baltic Federal University, Kaliningrad, Russia; 2 Immanuel Kant Baltic Federal University, Kaliningrad, Russia
[Sym 11] Cognitive science, neurogenetics, neuroinformatics, and systems computational biologyMRI examination of the quantitative content of myelin in the brain of mice with CNTN6 gene deletion on the background of prolonged hyperglycemiaRanzaeva AryunaRanzaeva A.1*, Akulov A.2, Tur D.2, Shadrina M.1, Khodanovich M.11 National Research Tomsk State University, Tomsk, Russia; 2 Institute of Cytology and Genetics, SB RAS, Novosibirsk, Russia
[Sym 11] Cognitive science, neurogenetics, neuroinformatics, and systems computational biologyMolecular Organization of the Functional Properties of the SynapseRatushniak AlexA.S. Ratushnyak, A.L. ProskuraFederal Research Center for Information and Computational Technologies, Novosibirsk, Russia
[Sym 11] Cognitive science, neurogenetics, neuroinformatics, and systems computational biologyTyrosine kinase receptor signaling pathways in the postsynaptic interactome of hippocampal neuronsProskura A.L.Proskura A.L.*, Ratushnyak A.S.Federal Research Center for Information and Computational Technologies, Novosibirsk, Russia
[Sym 11] Cognitive science, neurogenetics, neuroinformatics, and systems computational biologyExtended multilevel mathematical model of epileptic seizuresKondrakhin Pavel YurievichKondrakhin P.*, Kolpakov F., Sagalajev B.Scientific Center for Genetics and Life Sciences, Sirius University of Science and Technology, Sirius, Russia
[Sym 12] 1. Processes of maintaining genome stability and reproduction of genetic informationShooting the BER: Inhibitors and organocatalytic switches as regulators of DNA glycosylases and AP endonucleasesZharkov Dmitry OlegovichZharkov D.O.1,2*1 Novosibirsk State University, Novosibirsk, Russia; 2 SB RAS Institute of Chemical Biology and Fundamental Medicine, Novosibirsk, Russia
[Sym 12] 1. Processes of maintaining genome stability and reproduction of genetic informationPARP1-Driven Nucleosome Remodeling as a Rational Strategy to Enable dCas-Based targeting inaccessible genomic regionsMaluchenko Natalya ValerievnaMaluchenko N.V.*¹, Koshkina D.O.¹, ², Nazarova A.S.¹, Korovina A.N.¹, Feofanov A.V.¹, ², Studitsky V.M.¹¹ Faculty of Biology, Lomonosov Moscow State University, Moscow, 119234, Russia; ² Institute of Gene Biology, Russian Academy of Sciences, Moscow, 119334, Russia
[Sym 12] 1. Processes of maintaining genome stability and reproduction of genetic informationInteraction of human ribosomal proteins with PARP1/2 enzymes leads to their ADP-ribosylation and the formation of molecular condensates in vitroKrasnikov AndreyKrasnikov A.1,2*, Zhakupova Yu.1,2, Sukhanova M.1, Naumenko K.1, Pavlov M.1, Malygin A.1, Lavrik O.1,2, Graifer D.1,21 Institute of Chemical Biology and Fundamental Medicine, SB RAS, Novosibirsk, Russia; 2 Novosibirsk National Research State University, Novosibirsk, Russia
[Sym 12] 1. Processes of maintaining genome stability and reproduction of genetic informationD.G. Knorre and the ribosomeGraifer DmitriGraifer D.1*Institute of Chemical Biology and Fundamental Medicine, SB RAS, Novosibirsk, Russia
[Sym 12] 1. Processes of maintaining genome stability and reproduction of genetic informationNew properties of PARP2 and PARP3 proteins: their role in the chromatin contextUkraintsev Alexander AndreevichUkraintsev A.*, Kutuzov M., Belousova E., Lavrik O.Institute of Chemical Biology and Fundamental Medicine, SB RAS, Novosibirsk, Russia
[Sym 12] 1. Processes of maintaining genome stability and reproduction of genetic informationHPF1 stimulates poly(ADP-ribosyl)ation of FUS and regulates compartment formation during PARP1 and PARP2 activationSukhanova Mariya VladislavovnaSukhanova M.1*, Singatulina A.1, Kutuzov M. 1, Lavrik O.11 Institute of Chemical Biology and Fundamental Medicine, SB RAS, Novosibirsk, Russia
[Sym 12] 1. Processes of maintaining genome stability and reproduction of genetic informationPARP1 regulates nucleosome strengthKutuzov MikhailKutuzov M.1*, Alekseev A.2, Belousova E.1, Goncharov I.2, Khodorkovskii M.2, Lavrik O.11 Institute of chemical biology and fundamental medicine, SB RAS, Novosibirsk, Russia; 2 Peter the Great St. Petersburg Polytechnic University, Saint Petersburg, Russia
[Sym 12] 1. Processes of maintaining genome stability and reproduction of genetic informationPARP3 Protein Is a Player in DNA Compaction RegulationBelousova Ekaterina A.Belousova E.1*, Kutuzov M.1, Malinina D.2, Pak A.1, Popova E.1, Maluchenko N.2, Feofanov A.2, Studitsky V.2,3, Lavrik O.11 Institute of Chemical Biology and Fundamental Medicine SB RAS, Novosibirsk, Russia; 2 Faculty of Biology, Lomonosov Moscow State University, Moscow, Russia; 3 Fox Chase Cancer Center, Philadelphia, USA
[Sym 12] 1. Processes of maintaining genome stability and reproduction of genetic informationDNA polymerases as tools for genetic technologiesKuznetsov NikitaKuznetsov N.A.Institute of Chemical Biology and Fundamental Medicine, SB RAS, Novosibirsk, Russia
[Sym 12] 1. Processes of maintaining genome stability and reproduction of genetic informationSpecificity of PARP1 and PARP2 in modulating DNA excision repair stagesKurgina Tatyana A.Kurgina T.¹*, Shtanov D.¹, Kutuzov M.¹, Endutkin A.¹, Moor N.¹, Lavrik O.¹1 Institute of Chemical Biology and Fundamental Medicine, SB RAS, Novosibirsk, Russia
[Sym 12] 1. Processes of maintaining genome stability and reproduction of genetic informationInterplay between Flap Endonuclease 1 and DNA polymerase β in long patch Base Excision Repair: new facets in mechanismKrasikova Yuliya SergeevnaKrasikova Y.S. *, Maltseva E.A., Khodyreva S.N., Rechkunova N.I. and Lavrik O.I.Institute of Chemical Biology and Fundamental Medicine, SB RAS, Novosibirsk, Russia
[Sym 12] 1. Processes of maintaining genome stability and reproduction of genetic informationImpact of natural polymorphisms on the activity and coordination of base excision repair enzymesKuznetsova Aleksandra A.Kuznetsova A.A.Institute of Chemical Biology and Fundamental Medicine, SB RAS, Novosibirsk, Russia
[Sym 12] 1. Processes of maintaining genome stability and reproduction of genetic information8-aminoguanine and 8-bromoguanine recognition by DNA-glycosylases and DNA-polymerasesKim DariaKim D.V.1*, Safonkina M.V.1,2, Chernysheva D.A.1,2, Zharkov T.D.1,2, Zharkov D.O.1,21 Institute of Chemical Biology and Fundamental Medicine, SB RAS, Novosibirsk, Russia; 2 Novosibirsk State University, Novosibirsk, Russia
[Sym 12] 1. Processes of maintaining genome stability and reproduction of genetic informationPrions and amyloids as the elements of protein inheritanceNizhnikov AntonNizhnikov A.A.1, 2*1 Department of Genetics and Biotechnology, St. Petersburg StateUniversity, 199034, St. Petersburg, Universitetskaya emb. 7-9-11; 2 Laboratory of Proteomics of Supraorganismal Systems, ARRIAM, 196608,St. Petersburg, Pushkin, Podbelskogo sh.,3.
[Sym 12] 1. Processes of maintaining genome stability and reproduction of genetic informationNaturally derived tyrosyl DNA phosphodiesterase 1 inhibitors as antitumor agentsZakharenko Aleksandra LeonidovnaZakharenko A.L.1*, Dyrkheeva N.S.1, Kornienko T.E.1, Chepanova A.A1, Chernyshova I.A.1, Luzina O.A.2, Salakhutdinov N.F.2, Lavrik O.I.11 Institute of Chemical Biology and Fundamental Medicine, SB RAS, Novosibirsk, Russia; N.N. Vorozhtsov Novosibirsk Institute of Organic chemistry SB RAS, Novosibirsk, Russia
[Sym 12] 1. Processes of maintaining genome stability and reproduction of genetic informationTreacle-dependent TOPBP1 condensation coordinates nucleolar DNA damage signaling and repairPetrova NadezhdaPetrova N.V1*, Deriglazov D.A.1, Luzhin A.V.1, Razin S.V. 1, Velichko A.K.1.1 Institute of Gene Biology, Russian Academy of Sciences, Moscow, Russia
[Sym 12] 1. Processes of maintaining genome stability and reproduction of genetic informationExtranucleolar copies of the R1 and R2 transposons contribute to piRNA production in D. melanogaster ovariesKolesnikova Tatyana D.Kolesnikova T.D. 1,2*, Pokholkova G.V.1, Veselova O.V. 1, Schubert V.3, Lavrov S.A. 4, Fefelova E.A. 5, Klenov M.S. 61 Institute of Molecular and Cellular Biology SB RAS, Novosibirsk, Russia; 2 Novosibirsk State University, Novosibirsk, Russia; 3 Leibniz Institute of Plant Genetics and Crop Plant Research Gatersleben (IPK), Seeland, Germany; 4 Institute of Molecular Genetics, Russian Academy of Sciences, Moscow, Russia; 5 Lomonosov Moscow State University, Moscow, Russia; 6 RNA Therapeutics Institute, University of Massachusetts Chan Medical School, Worcester, MA, USA
[Sym 12] 1. Processes of maintaining genome stability and reproduction of genetic informationEffect of G-quadruplexes and CpG methylation in DNA on the activity of human AP endonuclease 1Savitskaya ViktoriiaSavitskaya V.Yu.1*, Snyga V.G.1, Grishin V.D.², Zvereva M.I.¹, Kubareva E.A.31 Department of Chemistry of Natural Compounds, Faculty of Chemistry, Lomonosov Moscow State University, Moscow, Russia; 2 Faculty of Bioengineering and Bioinformatics, Lomonosov Moscow State University, Moscow, Russia; 3 Belozersky Institute of Physico-Chemical Biology, Lomonosov Moscow State University, Moscow, Russia
[Sym 12] 1. Processes of maintaining genome stability and reproduction of genetic informationStructural studies and dynamics of nucleosomes and their complexes with RNA polymeraseSokolova Olga SO.S. Sokolova1*, A.V. Moiseenko1, E.A. Osina1, G.A. Armeev1, T.B. Stanishneva-Konovalova1, A.N. Korovina1, N.S. Gerasimova11 Lomonosov Moscow State University, Moscow, Russia
[Sym 12] 1. Processes of maintaining genome stability and reproduction of genetic informationGuide-dependent bacterial immune systems: how to recognize and neutralize invader DNAKulbachinskiy AndreyKulbachinskiy A.1*1 Institute of Gene Biology, Russian Academy of Sciences, Moscow, Russia
[Sym 12] 1. Processes of maintaining genome stability and reproduction of genetic informationStudy of the dynamics of nucleosomes and supranucleosomal structures: the potential of computer simulationsShaytan Alexey KonstantinovichShaytan A.K.1,2*1 Lomonosov Moscow State University, Moscow, Russia; 2 HSE University, Moscow, Russia
[Sym 12] 1. Processes of maintaining genome stability and reproduction of genetic informationD.G. Knorre and aminoacyl-tRNA-synthetasesLavrik OlgaLavrik O.1*1 Institute of Chemical Biology and Fundamental Medicine, SB RAS, Novosibirsk, Russia
[Sym 12] 2. Apoptosis and other fundamental cellular processes regulating cell fateMathematical model of TNF-induced necroptosis with blocked alternative death pathwaysMiroshnichenko Maxim IgorevichMiroshnichenko M.I.1, *, Bogdanova D.A.1,2, Kolpakov F.A.1, Demidov O.N.1,2, Akberdin I.R.11 Sirius University of Science and Technology, Sochi, Russia; 2 Institute of Cytology, RAS, St. Petersburg, Russia
[Sym 12] 2. Apoptosis and other fundamental cellular processes regulating cell fateStructural modeling of mutations at the CD95/CD95L interface using deep learning methods.Venzel ArturVenzel A.S.1,2*, Ivanisenko V.A.1,21 Institute of Cytology and Genetics, SB RAS, Novosibirsk, Russia; 2 Kurchatov Genomic Center of the Institute of Cytology and Genetics, SB RAS, Novosibirsk, Russia
[Sym 12] 2. Apoptosis and other fundamental cellular processes regulating cell fateCell death and regeneration: causes, mechanisms and consequencesKopeina Gelina SergeevnaKopeina G.S.1,2,*1 Engelhardt Institute of Molecular Biology, Russian Academy of Sciences, Moscow, Russia; 2 Medical Research and Education Institute, MV Lomonosov Moscow State University, Moscow, Russia
[Sym 12] 2. Apoptosis and other fundamental cellular processes regulating cell fateModeling of Cell Death and Survival: Toward an Integrated Computational FrameworkKolpakov FedorKutumova E.1,2, Kolodkin A.1, Miroshnichenko M.1, Akberdin I.1, Kolpakov F.1,2*1 Sirius University of Science and Technology, Sirius, Russia; 2 Federal Research Center for Information and Computational Technologies, Novosibirsk, Russia
[Sym 12] 2. Apoptosis and other fundamental cellular processes regulating cell fateUncovering new regulatory checkpoints in the CD95 apoptotic network by mathematical and experimental approachesLavrik InnaLavrik I.N.1*1 Institute of Cytology and Genetics, Siberian Branch of the Russian Academy of Sciences (ICG SB RAS), Novosibirsk, Russia
[Sym 12] 2. Apoptosis and other fundamental cellular processes regulating cell fateThe concept of natural genome reconstruction. Potential for practical application in the treatment of socially significant diseases and antiage therapyBogachev SergeyOshchepkov D.Y., Ruzanova V.S., Aksenova A.M., Proskurina A.S., Bogachev S.S.*Institute of Cytology and Genetics, SB RAS, Novosibirsk, Russia
[Sym 12] 2. Apoptosis and other fundamental cellular processes regulating cell fateOncolytic virus VV-GMCSF-Lact. Mechanisms of cell death in tumors of various histogenesisKuligina ElenaKuligina E. 1,2*, Koval O.1, Vasileva N. 1,3, Kochneva G.4, Richter V.11 Institute of Chemical Biology and Fundamental Medicine, SB RAS, Novosibirsk, Russia; 2 Oncostar LLC, Novosibirsk, Russia; 3 Sirius University of Science and Technology, Krasnodar Region, Federal Territory of Sirius, Russia; 4 State Research Center of Virology and Biotechnology "Vector", Rospotrebnadzor, Koltsovo, Novosibirsk Region, Russia
[Sym 12] 2. Apoptosis and other fundamental cellular processes regulating cell fateCold plasma treatment induces endoplasmic reticulum stress and membrane damage in tumor cellsBiryukov MikhailBiryukov M.1,2*, Polyakova A.1,2, Milakhina E.2, Zakrevsky D. 2, Schweigert I. 2, Koval O. 1,21 Institute of Chemical Biology and Fundamental Medicine, SB RAS, Novosibirsk, Russia; 2 Khristianovich Institute of Theoretical and Applied Mechanics, SB RAS, Novosibirsk, Russia
[Sym 13] 1. Genetic determinants of aging and longevityAcceleration of epigenetic age and natural deathMalyutina SofiaMalyutina S.1*, Chervova O.2, Maximov V.11 Research Institute of Internal and Preventive Medicine - Branch of the Institute of Cytology and Genetics, SB RAS (IIPM - Branch IC&G, SB RAS), Novosibirsk, Russia; 2 University College London, London WC1E6BT, United Kingdom
[Sym 13] 1. Genetic determinants of aging and longevityMultiple effects of activity of microRNA biogenesis genes on lifespan and age-depending physiological parameters in Drosophila melanogasterProshkina EkaterinaProshkina E.1*, Pakshina N.1, Shchegoleva E.1, Koval L.1, Zemskaya N.1, Timusheva N.1, Mikhailova D.1, Babak T.1, Shaposhnikov M.1, Moskalev A.21 Institute of Biology, Komi Science Centre, Ural Branch, Russian Academy of Sciences, Syktyvkar, Russia; 2 Institute of Biology of Aging and Healthy Longevity Medicine with Preventive Medicine Clinic, Russian Scientific Centre of Surgery Named After Academician B. V. Petrovsky, Moscow, Russia
[Sym 13] 1. Genetic determinants of aging and longevityIdentification of cis-regulatory genetic elements associated with extended post-reproductive lifespan in toothed whales using accelerated evolution analysisNelli ArakelyanArakelyan N.A.¹*, Manakhov A.D.¹˒², Rogaev E.I.¹˒³¹ Centre for Genetics and Life Sciences, Sirius University of Science and Technology, Sirius, Russia; ² N. I. Vavilov Institute of General Genetics, Russian Academy of Sciences, Moscow, Russia; ³ Department of Psychiatry, UMass Chan Medical School, Worcester, Massachusetts, USA
[Sym 13] 1. Genetic determinants of aging and longevityGenetic basis of premature aging: whole-genome analysis of OXYS ratsPetrova ViktoriaPetrova V.M.1*, Protasova M.S.1,2, Manakhov A.D.1,2, Stefanova N.A.3, Kolosova N.G.3, Rogaev E.I.1,41 Sirius University of Science and Technology, Olympiyskiy Ave., 1., Sirius Federal Territory, Krasnodar region, 354340, Russian Federation; 2 Vavilov Institute of General Genetics of the Russian Academy of Sciences, Gubkina str. 3 b.4, Moscow, 119991, Russian Federation; 3 Institute of Cytology and Genetics SB RAS, Academician Lavrentyev Ave., 10, Novosibirsk, 630090, Russian Federation; 4 UMass Chan Medical School, Department of Psychiatry, Shrewsbury, 01545, United States
[Sym 13] 1. Genetic determinants of aging and longevityTranscriptomic studies of astrocytes differentiated from iPSCs with different APOE gene variantsAbushinova GerelAbushinova G.1*, Mamchur A.1, Zhdanova A.1, Zelenova E.1, Kobyzeva P.1, Romanova A.1, Mukhin V.1, Ivanov M.1, Yudin V.1, Keskinov A.1, S.M. Yudin S.1, Kashtanova D.11 Federal State Budgetary Institution «Centre for Strategic Planning and Management of Biomedical Health Risks» of the Federal medical and biological agency (Centre for Strategic Planning, of the Federal medical and biological agency), Moscow, Russia
[Sym 13] 1. Genetic determinants of aging and longevityDemographic safety in the Russian Federation: genetic, ecologo-social and ethnic aspects of men's reproductive healthOsadchuk AleksanderOsadchuk A.1*, Vasiliev G.1, Ivanov M.2, Prasolova M.2, Osadchuk L.11 Institute of Cytology and Genetics, SB RAS, Novosibirsk, Russia; 2 Vector-Best JSC, Novosibirsk, Russia
[Sym 13] 1. Genetic determinants of aging and longevityImmunosenescence as a factor inducing the systemic process of age-related changes in homeostasisKozlov VladimirV.A. KozlovResearch Institute of Fundamental and Clinical Immunology of the Siberian Branch of the Russian Academy of Sciences, Novosibirsk, Russia
[Sym 13] 1. Genetic determinants of aging and longevityCommon and rare mtDNA variants in Parkinson’s diseaseGolubenko MariaGolubenko M.V.1*, Bragina E.Y.1,2, Nikitina M.A.2, Alifirova V.M.2, Babushkina N.P.1, Valiakhmetov N.R.1, Zarubin A.A.1, Ogorodnikov S.A.1, Shaidurova E.R.1,2,Nazarenko M.S.1,21 Research Institute of Medical Genetics, Tomsk National Research Medical Center, Tomsk, Russia; 2 Siberian State Medical University, SSMU, Tomsk, Russia
[Sym 13] 1. Genetic determinants of aging and longevityNovel epigenetic markers of human agingVedunova Maria ValeriavnaRashidova L.¹, Zharova A.-M.¹, Sergeeva A.¹, Davydova E.¹, Lobanova N., Vedunova M.¹*¹ Lobachevsky University of Nizhny Novgorod, Nizhny Novgorod, Russia
[Sym 13] 1. Genetic determinants of aging and longevityExpression of the neurogenesis factor Stc in myocytes affects the lifespan and fitness of DrosophilaSymonenko Alexander V.Symonenko A.V.1*, Roshina N.V.1,2, Pasyukova E.G.11 National Research Centre “Kurchatov Institute”, Moscow, Russia; 2 Vavilov Institute of General Genetics RAS, Moscow, Russia
[Sym 13] 2. Systemic mechanisms of aging as targets to extend healthspanClinical evaluation of aging - a systemic problem in science and societyStambler IliaStambler I.1,2*1 Department of Science, Technology and Society, Bar-Ilan University, Ramat Gan, Israel; 2 Vetek (Seniority) Association - the Movement for Longevity and Quality of Life, Tel Aviv, Israel
[Sym 13] 2. Systemic mechanisms of aging as targets to extend healthspanMitochondrial dysfunction is a pivotal feature in accelerated brain aging: when does the “window of opportunity” for its prevention open?Stefanova NataliaStefanova N.1*, Kolosova N.11 Institute of Cytology and Genetics, SB RAS, Novosibirsk, Russia
[Sym 13] 2. Systemic mechanisms of aging as targets to extend healthspanThe functional state of excision DNA repair systems in Myotis species with different maximum lifespansPetruseva IrinaPetruseva I.1*, Nazarov K.1, Popov A.1, Lavrik O.1,21 Institute of Chemical Biology and Fundamental Medicine, SB RAS, Novosibirsk, Russia; 2 Novosibirsk National Research State University, Novosibirsk, Russia
[Sym 13] 2. Systemic mechanisms of aging as targets to extend healthspanSocial isolation in older adult SHR, WKY, and Wistar rats: cognitive processes and activation of neuroinflammationStepanichev MikhailStepanichev M.*, Mamedova D., Nedogreeva O., Kvichansky A., Tret’yakova L., Lazareva N., Aniol V., Riga V., Gulyaeva N.Institute of Higher Nervous Activity and Neurophysiology, RAS, Moscow, Russia
[Sym 13] 2. Systemic mechanisms of aging as targets to extend healthspanAging and age-related diseases - the "chicken or egg" problem for gerontologistsKhokhlov Alexander NikolaevichKhokhlov A.N.*Evolutionary Cytogerontology Sector, School of Biology, Lomonosov Moscow State University, Moscow, Russia
[Sym 13] 2. Systemic mechanisms of aging as targets to extend healthspanAge-dependent trehalose treatment of 5xFAD mice with early Alzheimer's disease phenotypePupyshev AlexanderPupyshev A.B.*, Akopyan A.A. Tenditnik M.V., Ovsyukova M.V., Belichenko V.M., Dubrovina N.I., Korolenko T.A., Tikhonova M.A.Scientific Research Institute of Neurosciences and Medicine, Novosibirsk
[Sym 13] 3. Bioinformatics approaches to studying mechanisms of aging and identifying strategies to slow itBenchmarking of gene signatures and bioinformatic tools for cellular senescence evaluation using single-cell transcriptomic dataAlekseevskaya ElizavetaAlekseevskaya E.*, Borodkina A.Institute of Cytology of the Russian Academy of Sciences, Saint Petersburg, Russia
[Sym 13] 3. Bioinformatics approaches to studying mechanisms of aging and identifying strategies to slow itAge-associated changes in the human transcriptome and metabolomeMukhametshina ReginaMukhametshina R.1*, Alekseev A.1,2, Mukhametshina A.31 Lomonosov Moscow State University, Moscow, Russia; 2 NMRC for OGP named after V.I. Kulakov, Laboratory of Systems Biology of Aging and Geroprotective Technologies, Moscow, Russia
[Sym 13] 3. Bioinformatics approaches to studying mechanisms of aging and identifying strategies to slow itSomatic mutations impose an entropic upper bound on human lifespanFedotov Vlad RomanovichVlad Fedotov1,2*, Evgeniy Efimov1,2, Leonid Malaev1, Ekaterina E. Khrameeva1, Dmitrii Kriukov1,21 Skolkovo Institute of Science and Technology, Moscow, Russia; 2 AIRI, Moscow, Russia
[Sym 13] 3. Bioinformatics approaches to studying mechanisms of aging and identifying strategies to slow itexBAClock: A Navigator in the World of Biological Aging ClocksIvanchenko Mikhail VasilevichIvanchenko M.V.1*, Kobelyatskaya A.A.2, Novoselova A.A.1, Bylinskaya K.A.1, Moskalev A.21 Institute of Biogerontology, Lobachevsky University, Nizhny Novgorod, Russia; 2 Institute of Biology of Aging and Healthy Longevity Medicine with Preventive Medicine Clinic, Petrovsky Russian Research Centre of Surgery, Moscow, Russia
[Sym 13] 4. Heterogeneity of the aging process and age-related diseasesContribution of altered activity of mitogen-activated protein kinase signaling pathways to the pathogenesis of Alzheimer’s disease: an experimental studyMuraleva NataliaMuraleva N.*, Kolosova N.G.Institute of Cytology and Genetics, Siberian Branch of Russian Academy of Sciences, Novosibirsk, Russia
[Sym 13] 4. Heterogeneity of the aging process and age-related diseasesDNA repair protein genes in the phenomenon of longevityBabushkina Nadezhda PetrovnaBabushkina N. *, Nazarenko M.S.1 Research Institute of Medical Genetics, Tomsk Scientific Research Center, Tomsk, Russia
[Sym 13] 4. Heterogeneity of the aging process and age-related diseasesMolecular genetic determinants of age-associated diseases and their combinationsBragina ElenaBragina E.Y. 1,2*, Nazarenko M.S.1,2, Pusyrev V.P. 1,21 Research Institute of Medical Genetics, Tomsk National Research Medical Center, Tomsk, Russia; 2 Siberian State Medical University, SSMU, Tomsk, Russia