Accepted_test

Bacterial genomes are internally formatted
by Eugene Korotkov | Institute of Bioengineering, Research Center of Biotechnology of the Russian Academy of Sciences
Abstract ID: 10
Event: BGRS-abstracts
Sections: [Sym 1] Section “Structural-functional organization of genomes and transcriptomics”

We searched for dispersed repeats using the IP method in the genomes of bacteria from 42 phyla. In each genome, a family of repeats was identified with copy numbers ranging from 103 to 1.4x104, depending on the bacterial genome. Repeat lengths range from 450 to 580 bases. More than 90% of the detected repeats are superimposed as a motif on coding sequences, and the repeats occupy from 30 to 50% of the bacterial genome. The repeats contain conserved islands interspersed with weakly similar regions. The presence of which repeats in the bacterial genome is similar to the formatting of a computer hard drive. We hypothesize that the detected repeat families may be involved in the formation of the bacterial nucleoid.