Accepted_test

Analysis of Genome Structure and Its Variations in Potato Cultivars Grown in Russia

by Karetnikov D.I. | Vasiliev G.V. | Toshchakov S.V. | Shmakov N.A. | Genaev M.A. | Nesterov M.A. | Ibragimova S.M. | Rybakov D.A. | Gavrilenko T.A. | Salina E.A. | Patrushev M.V. | Kochetov A.V. | Afonnikov D.A. | Kurchatov Genomic Center of the Institute of Cytology and Genetics, SB RAS | Kurchatov Genomic Center of the Institute of Cytology and Genetics, SB RAS | Kurchatov Institute | Kurchatov Genomic Center of the Institute of Cytology and Genetics, SB RAS | Kurchatov Genomic Center of the Institute of Cytology and Genetics, SB RAS | Kurchatov Genomic Center of the Institute of Cytology and Genetics, SB RAS | Kurchatov Genomic Center of the Institute of Cytology and Genetics, SB RAS | N.I. Vavilov All-Russian Institute of Plant Genetic Resources | N.I. Vavilov All-Russian Institute of Plant Genetic Resources | Kurchatov Genomic Center of the Institute of Cytology and Genetics, SB RAS | Kurchatov Institute | Institute of Cytology and Genetics, SB RAS | Kurchatov Genomic Center of the Institute of Cytology and Genetics, SB RAS

Abstract ID: 373

Event: BGRS-abstracts

Sections: [Sym 6] Section “Genomics, genetics and systems biology of plants”

Solanum tuberosum L. (potato) is the most important crop grown almost all over the world. In this study, 30 genomes of potato Solanum tuberosum L. of different varieties grown in Russia were sequenced by paired-end short reads using Illumina platform. The genomes were reconstructed de novo, annotated and pan-genome was reconstructed. Copy number variations and single nucleotide polymorphisms were identified in the genomes and further analyzed and compared with other cultivars from different countries.