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Enter brief annotation of your abstract in this text form (around 250 words)

The analysis of promoter regions of genes often reveals differences from the existing annotation, which can be caused both by the insufficient accuracy of the existing annotation and the existence of transcripts previously unknown and activated under certain non-standard conditions. Taking into account the data from CAGE experiments would make it possible to better identify the initial positions of such transcripts, which allows us to determine the position of the start of transcription, as well as to identify the events of the promoter shift. In this study, we predicted transcription start sites (TSS) in the chicken genome and evaluated their expression based on data obtained from CAGE experiments, including those of the FANTOM5 project. Our predictions were compared against the Ensembl and Refseq annotations. We found new transcription starts, including those presumably associated with the events of promoter shift.

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