Methylation and expression profiles in Apoe vicinity point to specific neighboring interaction of Apoe and TOMM40 genes: implication for The Alzheimer disease.

Vladimir Babenko11Institute of Cytology and Genetics SB_RAS, bob@bionet.nsc.ru We assessed the dynamics of 8 genes including TOMM40, Apoe and other adjacent ones for overall chromatin marks landscape, including methylation profiles across ENCODE brain cell lines, and histone and ctcf marks. We revealed the region manifests Hi-C topology dynamics in a cell-specific manner. Additionally, based on methylation and histone marks profiles we underscore competitive manner of genes expression implying disrupted locus wide genes expression balance in Alzheimer patients due to Apoe extended locus methylation profile alteration.

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Mitochondrial dysfunction and redox balance alterations in the development of AD-like pathology in OXYS rats

Poster (download) Mikhail Tyumentsev1, Natalia Muraleva2, Yulia Polienko3, Artyom Gorodetsky4, Elena Bagryanskaya51ICG SB RAS, landselur@bionet.nsc.ru2ICG SB RAS, Myraleva@bionet.nsc.ru3NIOCH SB RAS, polienko@nioch.nsc.ru4NIOCH SB RAS, gorodaa@nioch.nsc.ru5NIOCH SB RAS, egbagryanskaya@nioch.nsc.ru This study focuses on the relationship between mitochondrial dysfunction and redox-status in the context of the development of signs of Alzheimer’s disease (AD). Mitochondrial dysfunction is considered the missing link between brain aging and AD [1], the most common type of age-related dementia worldwide, but the exact causal relationship between mitochondrial dysfunction and the transition from healthy aging to AD remains to be fully understood. Oxidative stress is thought to play a significant role in this mitochondrial dysfunction, leading to cellular damage in redox imbalance. However, the extent of these processes and timing of their occurrence within the scope of AD remain hard to study, especially so in the early, pre-clinical stages of the disease. We explored the mechanisms underlying the disruption of mitochondrial function, their impact on the initiation and progression of pathological molecular cascades of AD, and assessed the changes in redox status as one of the main consequences of oxidative stress. This investigation was conducted using senescence-accelerated OXYS rats, which spontaneously develop all major signs of AD and largely reproduce the stages of the disease. We concluded that mitochondrial dysfunction appears to mediate or possibly even initiate AD-like pathology in OXYS rats. Importantly this takes place with no apparent connection to redox imbalance as on both transcriptional and biochemical levels OXYS rats display no significant changes in redox-status and ROS production as compared to controls.

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Nanobodies design for treatment of age-related diseases

Mohammad Mehdi Heidari1, Yuriy L. Orlov21Department of Biology, Faculty of science,Yazd University, Yazd, Iran, Heidarimm@yazd.ac.ir2Novosibirsk State University, Novosibirsk, Russia, orlov@bionet.nsc.ru The problem of the treatment of age related diseases such as Alzheimer disease demands development of new drug design strategies. Reagents that specifically recognize oligomeric morphologies of AОІ have potential diagnostic and therapeutic value. Nanobodies (Nbs) or Single-domain antibodies are the smallest antigen-binding fragments derived from heavy-chain-only antibodies. The E1 nanobody selectively recognizes naturally occurring AОІ aggregates produced in human AD brain tissue We discuss a method for the generation and binding optimization of VHHs that involves the grafting of the complementarity determining regions (CDRs) from already existing, non-camelid antibodies to VHH frameworks, followed by affinity maturation and target binding improvement using in silico site-directed mutagenesis.

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